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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11461 O_BomoMSG20315_3prime_partial:A_BomoMSG_c26654_g1_i2
503bp
 leucine-rich_repeat_protein_soc-2_homolog_[Bombyx_mori]
11462 O_BomoMSG20316_internal:A_BomoMSG_c26654_g1_i3
439bp
 leucine-rich_repeat_protein_soc-2_homolog_[Bombyx_mori]
11463 O_BomoMSG20317_complete:A_BomoMSG_c26655_g1_i1
431bp
 myoneurin_[Bombyx_mori]
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0009649 P entrainment of circadian clock
GO:0010114 P response to red light
GO:0035271 P ring gland development
GO:0042051 P compound eye photoreceptor development
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0060086 P circadian temperature homeostasis
11464 O_BomoMSG20318_complete:A_BomoMSG_c26656_g1_i2
1705bp
 death-inducer_obliterator_1_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0097190 P apoptotic signaling pathway
11465 O_BomoMSG20319_complete:A_BomoMSG_c26656_g1_i2
112bp
 death-inducer_obliterator_1_isoform_X2_[Bombyx_mori]
11466 O_BomoMSG2031_internal:A_BomoMSG_c9865_g1_i1
143bp
 LETM1_domain-containing_protein_1_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043022 F ribosome binding
11467 O_BomoMSG20320_complete:A_BomoMSG_c26656_g1_i2
112bp
11468 O_BomoMSG20321_complete:A_BomoMSG_c26656_g1_i2
104bp
11469 O_BomoMSG20322_5prime_partial:A_BomoMSG_c26656_g1_i3
1111bp
 death-inducer_obliterator_1_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0097190 P apoptotic signaling pathway
11470 O_BomoMSG20323_5prime_partial:A_BomoMSG_c26656_g1_i5
268bp
 death-inducer_obliterator_1_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0097190 P apoptotic signaling pathway
11471 O_BomoMSG20324_complete:A_BomoMSG_c26656_g1_i6
1645bp
 death-inducer_obliterator_1_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0097190 P apoptotic signaling pathway
11472 O_BomoMSG20325_complete:A_BomoMSG_c26656_g1_i6
104bp
11473 O_BomoMSG20326_complete:A_BomoMSG_c26656_g1_i7
1807bp
 death-inducer_obliterator_1_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0097190 P apoptotic signaling pathway
11474 O_BomoMSG20327_complete:A_BomoMSG_c26656_g1_i7
104bp
11475 O_BomoMSG20328_complete:A_BomoMSG_c26656_g1_i8
1701bp
 death-inducer_obliterator_1_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0097190 P apoptotic signaling pathway
11476 O_BomoMSG20329_complete:A_BomoMSG_c26656_g1_i8
104bp
11477 O_BomoMSG2032_complete:A_BomoMSG_c9866_g1_i1
324bp
 probable_isoaspartyl_peptidase/L-asparaginase_GA20639_isoform_X3_[Bombyx_mori]
GO:0004067 F asparaginase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008798 F beta-aspartyl-peptidase activity
GO:0016787 F hydrolase activity
GO:0033345 P asparagine catabolic process via L-aspartate
11478 O_BomoMSG20330_internal:A_BomoMSG_c26657_g1_i1
297bp
 fibronectin_type-III_domain-containing_protein_3a_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001669 C acrosomal vesicle
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007286 P spermatid development
GO:0009566 P fertilization
GO:0012506 C vesicle membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0031410 C cytoplasmic vesicle
GO:0044822 F RNA binding
GO:0060009 P Sertoli cell development
11479 O_BomoMSG20331_3prime_partial:A_BomoMSG_c26657_g1_i1
124bp
11480 O_BomoMSG20332_5prime_partial:A_BomoMSG_c26657_g1_i1
124bp
11481 O_BomoMSG20333_internal:A_BomoMSG_c26657_g1_i2
739bp
 fibronectin_type-III_domain-containing_protein_3a_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11482 O_BomoMSG20334_3prime_partial:A_BomoMSG_c26657_g1_i2
124bp
11483 O_BomoMSG20335_5prime_partial:A_BomoMSG_c26657_g1_i2
124bp
11484 O_BomoMSG20336_internal:A_BomoMSG_c26657_g1_i3
320bp
 fibronectin_type-III_domain-containing_protein_3a_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001669 C acrosomal vesicle
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007286 P spermatid development
GO:0009566 P fertilization
GO:0012506 C vesicle membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0031410 C cytoplasmic vesicle
GO:0044822 F RNA binding
GO:0060009 P Sertoli cell development
11485 O_BomoMSG20337_3prime_partial:A_BomoMSG_c26657_g1_i3
124bp
11486 O_BomoMSG20338_5prime_partial:A_BomoMSG_c26657_g1_i3
124bp
11487 O_BomoMSG20339_internal:A_BomoMSG_c26657_g1_i4
568bp
 fibronectin_type-III_domain-containing_protein_3a_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001669 C acrosomal vesicle
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007286 P spermatid development
GO:0009566 P fertilization
GO:0012506 C vesicle membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0031410 C cytoplasmic vesicle
GO:0044822 F RNA binding
GO:0060009 P Sertoli cell development
11488 O_BomoMSG2033_complete:A_BomoMSG_c9875_g1_i1
542bp
 eukaryotic_translation_initiation_factor_3_subunit_L_[Bombyx_mori]
GO:0001731 P formation of translation preinitiation complex
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0005852 C eukaryotic translation initiation factor 3 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0016282 C eukaryotic 43S preinitiation complex
GO:0033290 C eukaryotic 48S preinitiation complex
11489 O_BomoMSG20340_3prime_partial:A_BomoMSG_c26657_g1_i4
124bp
11490 O_BomoMSG20341_5prime_partial:A_BomoMSG_c26657_g1_i4
124bp
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