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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11401 O_BomoMSG20261_3prime_partial:A_BomoMSG_c26640_g1_i1
214bp
 uncharacterized_protein_LOC110385920_[Bombyx_mori]
11402 O_BomoMSG20262_5prime_partial:A_BomoMSG_c26640_g1_i2
373bp
 PREDICTED:_uncharacterized_protein_LOC106118000_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004803 F transposase activity
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
11403 O_BomoMSG20263_3prime_partial:A_BomoMSG_c26640_g1_i2
184bp
 uncharacterized_protein_LOC110385920_[Bombyx_mori]
11404 O_BomoMSG20264_5prime_partial:A_BomoMSG_c26640_g1_i3
373bp
 PREDICTED:_uncharacterized_protein_LOC106118000_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004803 F transposase activity
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
11405 O_BomoMSG20265_3prime_partial:A_BomoMSG_c26640_g1_i3
240bp
 uncharacterized_protein_LOC110385920_[Bombyx_mori]
11406 O_BomoMSG20266_internal:A_BomoMSG_c26640_g2_i1
300bp
 uncharacterized_protein_LOC110385920_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003693 F P-element binding
GO:0004803 F transposase activity
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
11407 O_BomoMSG20267_internal:A_BomoMSG_c26641_g1_i1
299bp
 uncharacterized_protein_LOC110385588_[Bombyx_mori]
11408 O_BomoMSG20268_complete:A_BomoMSG_c26642_g1_i1
230bp
 AN1-type_zinc_finger_protein_2A_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0006616 P SRP-dependent cotranslational protein targeting to membrane, translocation
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
11409 O_BomoMSG20269_complete:A_BomoMSG_c26642_g1_i1
104bp
11410 O_BomoMSG2026_5prime_partial:A_BomoMSG_c9855_g1_i2
151bp
11411 O_BomoMSG20270_complete:A_BomoMSG_c26642_g1_i1
102bp
11412 O_BomoMSG20271_5prime_partial:A_BomoMSG_c26642_g2_i1
303bp
 mitotic_spindle_assembly_checkpoint_protein_MAD1_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000922 C spindle pole
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0015629 C actin cytoskeleton
GO:0042130 P negative regulation of T cell proliferation
GO:0048538 P thymus development
GO:0051301 P cell division
GO:0072686 C mitotic spindle
GO:0090235 P regulation of metaphase plate congression
GO:1901990 P regulation of mitotic cell cycle phase transition
11413 O_BomoMSG20272_5prime_partial:A_BomoMSG_c26642_g2_i1
100bp
11414 O_BomoMSG20273_5prime_partial:A_BomoMSG_c26642_g1_i2
191bp
 AN1-type_zinc_finger_protein_2A_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0006616 P SRP-dependent cotranslational protein targeting to membrane, translocation
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
11415 O_BomoMSG20274_complete:A_BomoMSG_c26642_g1_i2
104bp
11416 O_BomoMSG20275_complete:A_BomoMSG_c26642_g2_i2
732bp
 mitotic_spindle_assembly_checkpoint_protein_MAD1_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0051301 P cell division
GO:0072686 C mitotic spindle
GO:0090235 P regulation of metaphase plate congression
11417 O_BomoMSG20276_5prime_partial:A_BomoMSG_c26642_g2_i2
100bp
11418 O_BomoMSG20277_complete:A_BomoMSG_c26642_g2_i2
100bp
11419 O_BomoMSG20278_complete:A_BomoMSG_c26644_g1_i1
470bp
 leucine-rich_repeat_protein_soc-2_homolog_[Bombyx_mori]
GO:0000164 C protein phosphatase type 1 complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0019903 F protein phosphatase binding
GO:0046579 P positive regulation of Ras protein signal transduction
11420 O_BomoMSG20279_5prime_partial:A_BomoMSG_c26644_g1_i2
439bp
 leucine-rich_repeat_protein_soc-2_homolog_[Bombyx_mori]
GO:0000164 C protein phosphatase type 1 complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0019903 F protein phosphatase binding
GO:0046579 P positive regulation of Ras protein signal transduction
11421 O_BomoMSG2027_5prime_partial:A_BomoMSG_c9855_g1_i2
107bp
11422 O_BomoMSG20280_complete:A_BomoMSG_c26644_g1_i3
470bp
 leucine-rich_repeat_protein_soc-2_homolog_[Bombyx_mori]
GO:0000164 C protein phosphatase type 1 complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0019903 F protein phosphatase binding
GO:0046579 P positive regulation of Ras protein signal transduction
11423 O_BomoMSG20281_complete:A_BomoMSG_c26644_g1_i4
470bp
 leucine-rich_repeat_protein_soc-2_homolog_[Bombyx_mori]
GO:0000164 C protein phosphatase type 1 complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0019903 F protein phosphatase binding
GO:0046579 P positive regulation of Ras protein signal transduction
11424 O_BomoMSG20282_complete:A_BomoMSG_c26644_g1_i5
162bp
 leucine-rich_repeat_protein_soc-2_homolog_[Bombyx_mori]
GO:0002224 P toll-like receptor signaling pathway
GO:0002376 P immune system process
GO:0002755 P MyD88-dependent toll-like receptor signaling pathway
GO:0004872 F signaling receptor activity
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006954 P inflammatory response
GO:0006955 P immune response
GO:0007165 P signal transduction
GO:0007250 P activation of NF-kappaB-inducing kinase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0034150 P toll-like receptor 6 signaling pathway
GO:0035355 C Toll-like receptor 2-Toll-like receptor 6 protein complex
GO:0035663 F Toll-like receptor 2 binding
GO:0038124 P toll-like receptor TLR6:TLR2 signaling pathway
GO:0042088 P T-helper 1 type immune response
GO:0042496 P detection of diacyl bacterial lipopeptide
GO:0042742 P defense response to bacterium
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043507 P positive regulation of JUN kinase activity
GO:0045087 P innate immune response
GO:0045121 C membrane raft
GO:0045410 P positive regulation of interleukin-6 production
GO:0050702 P interleukin-1 beta production
GO:0050707 P regulation of cytokine production
GO:0071723 F lipopeptide binding
GO:0071726 P cellular response to diacyl bacterial lipopeptide
GO:1900227 P positive regulation of NLRP3 inflammasome complex assembly
11425 O_BomoMSG20283_complete:A_BomoMSG_c26645_g1_i1
475bp
 peptidyl-prolyl_cis-trans_isomerase_CWC27_homolog_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0006457 P protein folding
GO:0016853 F isomerase activity
GO:0071013 C catalytic step 2 spliceosome
11426 O_BomoMSG20284_5prime_partial:A_BomoMSG_c26645_g1_i2
191bp
 peptidyl-prolyl_cis-trans_isomerase_CWC27_homolog_isoform_X2_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0006457 P protein folding
GO:0016853 F isomerase activity
11427 O_BomoMSG20285_complete:A_BomoMSG_c26645_g1_i3
434bp
 peptidyl-prolyl_cis-trans_isomerase_CWC27_homolog_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0006457 P protein folding
GO:0016853 F isomerase activity
GO:0071013 C catalytic step 2 spliceosome
11428 O_BomoMSG20286_complete:A_BomoMSG_c26645_g1_i3
108bp
11429 O_BomoMSG20287_5prime_partial:A_BomoMSG_c26647_g2_i1
158bp
 uncharacterized_protein_LOC110385892_[Bombyx_mori]
11430 O_BomoMSG20288_internal:A_BomoMSG_c26647_g1_i4
99bp
 lipid_droplet-associated_hydrolase-like_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005811 C lipid droplet
GO:0008152 P metabolic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030730 P sequestering of triglyceride
GO:0034389 P lipid droplet organization
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