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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11341 O_BomoMSG20207_3prime_partial:A_BomoMSG_c26625_g1_i2
857bp
 coiled-coil_domain-containing_protein_73-like_[Bombyx_mori]
11342 O_BomoMSG20208_complete:A_BomoMSG_c26625_g1_i2
176bp
11343 O_BomoMSG20209_complete:A_BomoMSG_c26625_g1_i2
100bp
11344 O_BomoMSG2020_internal:A_BomoMSG_c9846_g1_i1
143bp
 serine/threonine-protein_kinase_par-1_isoform_X4_[Bombyx_mori]
11345 O_BomoMSG20210_5prime_partial:A_BomoMSG_c26625_g2_i1
155bp
 activating_transcription_factor_7-interacting_protein_1-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006306 P DNA methylation
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016887 F ATP hydrolysis activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045898 P regulation of RNA polymerase II transcription preinitiation complex assembly
11346 O_BomoMSG20211_internal:A_BomoMSG_c26625_g1_i3
618bp
 coiled-coil_domain-containing_protein_73-like_[Bombyx_mori]
11347 O_BomoMSG20212_complete:A_BomoMSG_c26625_g1_i3
176bp
11348 O_BomoMSG20213_complete:A_BomoMSG_c26625_g1_i3
100bp
11349 O_BomoMSG20214_complete:A_BomoMSG_c26626_g1_i1
664bp
 zinc_finger_protein_107-like_[Helicoverpa_armigera]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001206 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
11350 O_BomoMSG20215_complete:A_BomoMSG_c26626_g1_i1
157bp
11351 O_BomoMSG20216_3prime_partial:A_BomoMSG_c26626_g1_i2
210bp
 zinc_finger_protein_92_isoform_X6_[Bombyx_mori]
11352 O_BomoMSG20217_complete:A_BomoMSG_c26626_g1_i3
182bp
 zinc_finger_protein_92_isoform_X6_[Bombyx_mori]
11353 O_BomoMSG20218_complete:A_BomoMSG_c26626_g1_i3
168bp
11354 O_BomoMSG20219_5prime_partial:A_BomoMSG_c26626_g1_i4
499bp
 zinc_finger_protein_107-like_[Helicoverpa_armigera]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
11355 O_BomoMSG2021_3prime_partial:A_BomoMSG_c9848_g1_i1
136bp
 tetratricopeptide_repeat_protein_17-like,_partial_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11356 O_BomoMSG20220_3prime_partial:A_BomoMSG_c26626_g1_i4
136bp
11357 O_BomoMSG20221_3prime_partial:A_BomoMSG_c26626_g1_i5
409bp
 zinc_finger_protein_678_isoform_X1_[Bombyx_mori]
GO:0000785 C chromatin
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0031936 P obsolete negative regulation of chromatin silencing
GO:0043035 F chromatin insulator sequence binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
11358 O_BomoMSG20222_complete:A_BomoMSG_c26626_g1_i6
575bp
 PREDICTED:_zinc_finger_protein_197-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
11359 O_BomoMSG20223_complete:A_BomoMSG_c26626_g1_i6
188bp
11360 O_BomoMSG20224_3prime_partial:A_BomoMSG_c26626_g1_i7
305bp
 zinc_finger_protein_568_isoform_X4_[Bombyx_mori]
11361 O_BomoMSG20225_complete:A_BomoMSG_c26626_g1_i7
188bp
11362 O_BomoMSG20226_complete:A_BomoMSG_c26627_g2_i1
121bp
 light-induced_protein-like_brain_protein_44_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006850 P mitochondrial pyruvate transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035774 P positive regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0050833 F pyruvate transmembrane transporter activity
GO:0061732 P mitochondrial acetyl-CoA biosynthetic process from pyruvate
GO:1902361 P mitochondrial pyruvate transmembrane transport
11363 O_BomoMSG20227_complete:A_BomoMSG_c26627_g4_i1
357bp
 protein_arginine_N-methyltransferase_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006479 P protein methylation
GO:0008168 F methyltransferase activity
GO:0008469 F histone-arginine N-methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016020 C membrane
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018216 P peptidyl-arginine methylation
GO:0019919 P peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0032259 P methylation
GO:0034969 P histone arginine methylation
GO:0035241 F protein-arginine omega-N monomethyltransferase activity
GO:0035242 F protein-arginine omega-N asymmetric methyltransferase activity
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
11364 O_BomoMSG20228_internal:A_BomoMSG_c26628_g1_i1
100bp
 leucine-rich_repeat_flightless-interacting_protein_2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016055 P Wnt signaling pathway
GO:0030275 F LRR domain binding
11365 O_BomoMSG20229_internal:A_BomoMSG_c26628_g1_i1
100bp
11366 O_BomoMSG2022_3prime_partial:A_BomoMSG_c9855_g1_i1
260bp
 MICOS_complex_subunit_Mic60_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022008 P neurogenesis
GO:0070584 P mitochondrion morphogenesis
11367 O_BomoMSG20230_5prime_partial:A_BomoMSG_c26628_g1_i2
155bp
 leucine-rich_repeat_flightless-interacting_protein_2_[Bombyx_mori]
GO:0016055 P Wnt signaling pathway
11368 O_BomoMSG20231_complete:A_BomoMSG_c26628_g1_i2
140bp
11369 O_BomoMSG20232_5prime_partial:A_BomoMSG_c26629_g1_i1
438bp
 SH2_domain-containing_protein_4B_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0010923 P negative regulation of phosphatase activity
GO:0019902 F phosphatase binding
11370 O_BomoMSG20233_complete:A_BomoMSG_c26629_g1_i1
100bp
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