Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
11221	O_BomoMSG2009_internal:A_BomoMSG_c9804_g1_i1 171bp	Bomo_Chr23	PREDICTED:_protein_tramtrack,_beta_isoform-like_isoform_X3_[Papilio_xuthus]
11222	O_BomoMSG200_5prime_partial:A_BomoMSG_c863_g1_i1 102bp	Bomo_Chr19
11223	O_BomoMSG20100_5prime_partial:A_BomoMSG_c26596_g1_i1 204bp	Bomo_Chr11
11224	O_BomoMSG20101_complete:A_BomoMSG_c26596_g1_i1 133bp	Bomo_Chr11
11225	O_BomoMSG20102_internal:A_BomoMSG_c26596_g3_i1 99bp	Bomo_Chr11	PREDICTED:_catenin_alpha-like,_partial_[Plutella_xylostella]	GO:0003779 F actin binding GO:0005198 F structural molecule activity GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005886 C plasma membrane GO:0005912 C adherens junction GO:0005913 C adherens junction GO:0005914 C spot adherens junction GO:0005915 C zonula adherens GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane GO:0007155 P cell adhesion GO:0007163 P establishment or maintenance of cell polarity GO:0007293 P germarium-derived egg chamber formation GO:0008092 F cytoskeletal protein binding GO:0015629 C actin cytoskeleton GO:0016020 C membrane GO:0016342 C catenin complex GO:0030054 C cell junction GO:0030055 C cell-substrate junction GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation GO:0034332 P adherens junction organization GO:0045296 F cadherin binding GO:0051015 F actin filament binding GO:0060323 P head morphogenesis GO:0060429 P epithelium development
11226	O_BomoMSG20103_internal:A_BomoMSG_c26596_g3_i1 99bp	Bomo_Chr11
11227	O_BomoMSG20104_internal:A_BomoMSG_c26596_g3_i1 99bp	Bomo_Chr11
11228	O_BomoMSG20105_internal:A_BomoMSG_c26596_g1_i2 254bp	Bomo_Chr11	catenin_alpha_isoform_X1_[Bombyx_mori]	GO:0003779 F actin binding GO:0005198 F structural molecule activity GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005886 C plasma membrane GO:0005912 C adherens junction GO:0005913 C adherens junction GO:0005914 C spot adherens junction GO:0005915 C zonula adherens GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane GO:0007155 P cell adhesion GO:0007163 P establishment or maintenance of cell polarity GO:0007293 P germarium-derived egg chamber formation GO:0008092 F cytoskeletal protein binding GO:0015629 C actin cytoskeleton GO:0016020 C membrane GO:0016342 C catenin complex GO:0030054 C cell junction GO:0030055 C cell-substrate junction GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation GO:0034332 P adherens junction organization GO:0045296 F cadherin binding GO:0051015 F actin filament binding GO:0060323 P head morphogenesis GO:0060429 P epithelium development
11229	O_BomoMSG20106_5prime_partial:A_BomoMSG_c26596_g1_i2 204bp	Bomo_Chr11
11230	O_BomoMSG20107_5prime_partial:A_BomoMSG_c26597_g1_i2 319bp	Bomo_Chr13	protein_scalloped_isoform_X4_[Helicoverpa_armigera]	GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific GO:0001159 F cis-regulatory region sequence-specific DNA binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006367 P transcription initiation from RNA polymerase II promoter GO:0035329 P hippo signaling GO:1902895 P positive regulation of miRNA transcription
11231	O_BomoMSG20108_complete:A_BomoMSG_c26597_g1_i2 116bp	Bomo_Chr13
11232	O_BomoMSG20109_complete:A_BomoMSG_c26597_g1_i3 358bp	Bomo_Chr13	protein_scalloped_isoform_X4_[Helicoverpa_armigera]	GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific GO:0001159 F cis-regulatory region sequence-specific DNA binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006367 P transcription initiation from RNA polymerase II promoter GO:0035329 P hippo signaling GO:1902895 P positive regulation of miRNA transcription
11233	O_BomoMSG2010_5prime_partial:A_BomoMSG_c9804_g1_i1 114bp	Bomo_Chr23
11234	O_BomoMSG20110_3prime_partial:A_BomoMSG_c26597_g1_i3 178bp	Bomo_Chr13
11235	O_BomoMSG20111_complete:A_BomoMSG_c26597_g1_i3 116bp	Bomo_Chr13
11236	O_BomoMSG20112_5prime_partial:A_BomoMSG_c26597_g1_i4 168bp	Bomo_Chr13	transcriptional_enhancer_factor_TEF-1_isoform_X2_[Helicoverpa_armigera]	GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific GO:0001159 F cis-regulatory region sequence-specific DNA binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006367 P transcription initiation from RNA polymerase II promoter GO:0035329 P hippo signaling GO:1902895 P positive regulation of miRNA transcription
11237	O_BomoMSG20113_3prime_partial:A_BomoMSG_c26597_g1_i4 112bp	Bomo_Chr13
11238	O_BomoMSG20114_complete:A_BomoMSG_c26598_g5_i1 379bp	Bomo_Chr3	ATPase_family_AAA_domain-containing_protein_1-B_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005777 C peroxisome GO:0005886 C plasma membrane GO:0008152 P metabolic process GO:0008568 F microtubule-severing ATPase activity GO:0016020 C membrane GO:0016787 F hydrolase activity GO:0016887 F ATP hydrolysis activity GO:0030054 C cell junction GO:0031122 P cytoplasmic microtubule organization GO:0045202 C synapse GO:0045211 C postsynaptic membrane
11239	O_BomoMSG20115_complete:A_BomoMSG_c26598_g5_i1 143bp	Bomo_Chr3
11240	O_BomoMSG20116_complete:A_BomoMSG_c26598_g5_i1 131bp	Bomo_Chr3	146aa_long_hypothetical_protein_[Pyrococcus_horikoshii_OT3]
11241	O_BomoMSG20117_complete:A_BomoMSG_c26598_g5_i2 383bp	Bomo_Chr3	ATPase_family_AAA_domain-containing_protein_1-B_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005777 C peroxisome GO:0005886 C plasma membrane GO:0008152 P metabolic process GO:0008568 F microtubule-severing ATPase activity GO:0016020 C membrane GO:0016787 F hydrolase activity GO:0016887 F ATP hydrolysis activity GO:0030054 C cell junction GO:0031122 P cytoplasmic microtubule organization GO:0045202 C synapse GO:0045211 C postsynaptic membrane
11242	O_BomoMSG20118_complete:A_BomoMSG_c26598_g5_i2 143bp	Bomo_Chr3
11243	O_BomoMSG20119_complete:A_BomoMSG_c26598_g5_i2 135bp	Bomo_Chr3	146aa_long_hypothetical_protein_[Pyrococcus_horikoshii_OT3]
11244	O_BomoMSG2011_5prime_partial:A_BomoMSG_c9804_g1_i1 105bp	Bomo_Chr23
11245	O_BomoMSG20120_3prime_partial:A_BomoMSG_c26599_g1_i1 237bp	Bomo_Chr10	trafficking_kinesin-binding_protein_milt_isoform_X5_[Bombyx_mori]	GO:0003777 F microtubule motor activity GO:0005515 F protein binding GO:0005623 C obsolete cell GO:0005739 C mitochondrion GO:0007287 P Nebenkern assembly GO:0007310 P oocyte dorsal/ventral axis specification GO:0017022 F myosin binding GO:0019233 P sensory perception of pain GO:0019895 F obsolete kinesin-associated mitochondrial adaptor activity GO:0019896 P axonal transport of mitochondrion GO:0030382 P sperm mitochondrion organization GO:0048311 P mitochondrion distribution GO:0051654 P establishment of mitochondrion localization GO:1904115 C axon cytoplasm
11246	O_BomoMSG20121_complete:A_BomoMSG_c26599_g1_i1 129bp	Bomo_Chr10
11247	O_BomoMSG20122_complete:A_BomoMSG_c26599_g1_i1 107bp	Bomo_Chr10
11248	O_BomoMSG20123_3prime_partial:A_BomoMSG_c26599_g1_i2 237bp	Bomo_Chr10	trafficking_kinesin-binding_protein_milt_isoform_X5_[Bombyx_mori]	GO:0003777 F microtubule motor activity GO:0005515 F protein binding GO:0005623 C obsolete cell GO:0005739 C mitochondrion GO:0007287 P Nebenkern assembly GO:0007310 P oocyte dorsal/ventral axis specification GO:0017022 F myosin binding GO:0019233 P sensory perception of pain GO:0019895 F obsolete kinesin-associated mitochondrial adaptor activity GO:0019896 P axonal transport of mitochondrion GO:0030382 P sperm mitochondrion organization GO:0048311 P mitochondrion distribution GO:0051654 P establishment of mitochondrion localization GO:1904115 C axon cytoplasm
11249	O_BomoMSG20124_complete:A_BomoMSG_c26599_g1_i2 129bp	Bomo_Chr10
11250	O_BomoMSG20125_complete:A_BomoMSG_c26599_g1_i2 107bp	Bomo_Chr10