SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/29137
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10861 O_BomoMSG19777_internal:A_BomoMSG_c26515_g1_i2
1240bp
 LOW_QUALITY_PROTEIN:_protein_4.1_homolog_[Bombyx_mori]
GO:0003015 P heart process
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0005920 C smooth septate junction
GO:0006612 P protein targeting to membrane
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007435 P salivary gland morphogenesis
GO:0007527 P adult somatic muscle development
GO:0008092 F cytoskeletal protein binding
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0009790 P embryo development
GO:0019991 P septate junction assembly
GO:0030054 C cell junction
GO:0035151 P regulation of tube size, open tracheal system
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045216 P cell-cell junction organization
GO:0060857 P establishment of glial blood-brain barrier
GO:0061343 P cell adhesion involved in heart morphogenesis
10862 O_BomoMSG19778_3prime_partial:A_BomoMSG_c26517_g4_i1
212bp
 pseudouridine-5'-phosphatase_isoform_X3_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0042060 P wound healing
GO:0046872 F metal ion binding
GO:1990738 F pseudouridine 5'-phosphatase activity
10863 O_BomoMSG19779_complete:A_BomoMSG_c26517_g7_i1
182bp
 pseudouridine-5'-phosphatase_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1990738 F pseudouridine 5'-phosphatase activity
10864 O_BomoMSG1977_internal:A_BomoMSG_c9666_g1_i1
113bp
 alpha_actinin,_partial_[Papilio_polytes]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007629 P flight behavior
GO:0030018 C Z disc
GO:0031532 P actin cytoskeleton reorganization
GO:0045214 P sarcomere organization
GO:0046872 F metal ion binding
GO:0051017 P actin filament bundle assembly
10865 O_BomoMSG19780_3prime_partial:A_BomoMSG_c26517_g4_i2
164bp
 pseudouridine-5'-phosphatase_isoform_X3_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0042060 P wound healing
GO:0046872 F metal ion binding
GO:1990738 F pseudouridine 5'-phosphatase activity
10866 O_BomoMSG19781_3prime_partial:A_BomoMSG_c26518_g1_i1
246bp
 serine/threonine-protein_kinase_pelle_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006606 P protein import into nucleus
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0008063 P Toll signaling pathway
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019732 P antifungal humoral response
GO:0019904 F protein domain specific binding
GO:0030097 P hemopoiesis
GO:0030162 P regulation of proteolysis
GO:0035172 P hemocyte proliferation
GO:0035556 P intracellular signal transduction
GO:0045087 P innate immune response
GO:0046777 P protein autophosphorylation
GO:0048262 P determination of dorsal/ventral asymmetry
10867 O_BomoMSG19782_complete:A_BomoMSG_c26518_g1_i1
207bp
 Os05g0486150,_partial_[Oryza_sativa_Japonica_Group]
10868 O_BomoMSG19783_5prime_partial:A_BomoMSG_c26518_g1_i1
107bp
10869 O_BomoMSG19784_3prime_partial:A_BomoMSG_c26518_g1_i2
433bp
 serine/threonine-protein_kinase_pelle_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006606 P protein import into nucleus
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0008063 P Toll signaling pathway
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019732 P antifungal humoral response
GO:0019904 F protein domain specific binding
GO:0030097 P hemopoiesis
GO:0030162 P regulation of proteolysis
GO:0035172 P hemocyte proliferation
GO:0035556 P intracellular signal transduction
GO:0045087 P innate immune response
GO:0046777 P protein autophosphorylation
GO:0048262 P determination of dorsal/ventral asymmetry
10870 O_BomoMSG19785_complete:A_BomoMSG_c26518_g1_i2
257bp
10871 O_BomoMSG19786_5prime_partial:A_BomoMSG_c26518_g1_i2
107bp
10872 O_BomoMSG19787_internal:A_BomoMSG_c26518_g1_i3
377bp
 serine/threonine-protein_kinase_pelle_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006606 P protein import into nucleus
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0008063 P Toll signaling pathway
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019732 P antifungal humoral response
GO:0019904 F protein domain specific binding
GO:0030097 P hemopoiesis
GO:0030162 P regulation of proteolysis
GO:0035172 P hemocyte proliferation
GO:0035556 P intracellular signal transduction
GO:0045087 P innate immune response
GO:0046777 P protein autophosphorylation
GO:0048262 P determination of dorsal/ventral asymmetry
10873 O_BomoMSG19788_complete:A_BomoMSG_c26518_g1_i3
257bp
10874 O_BomoMSG19789_5prime_partial:A_BomoMSG_c26518_g1_i3
107bp
10875 O_BomoMSG1978_internal:A_BomoMSG_c9674_g1_i1
168bp
 zinc_finger_protein_431-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10876 O_BomoMSG19790_5prime_partial:A_BomoMSG_c26520_g1_i1
196bp
 glutaminyl-peptide_cyclotransferase_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0006464 P cellular protein modification process
GO:0008270 F zinc ion binding
GO:0016603 F glutaminyl-peptide cyclotransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0017186 P peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
10877 O_BomoMSG19791_complete:A_BomoMSG_c26520_g1_i3
343bp
 glutaminyl-peptide_cyclotransferase_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0008270 F zinc ion binding
GO:0016603 F glutaminyl-peptide cyclotransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0017186 P peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase
GO:0046872 F metal ion binding
10878 O_BomoMSG19792_complete:A_BomoMSG_c26520_g1_i3
109bp
10879 O_BomoMSG19793_5prime_partial:A_BomoMSG_c26521_g1_i1
189bp
 fumarylacetoacetase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
10880 O_BomoMSG19794_complete:A_BomoMSG_c26521_g1_i1
170bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
10881 O_BomoMSG19795_5prime_partial:A_BomoMSG_c26521_g1_i3
181bp
 fumarylacetoacetase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
10882 O_BomoMSG19796_complete:A_BomoMSG_c26521_g1_i3
170bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
10883 O_BomoMSG19797_5prime_partial:A_BomoMSG_c26521_g1_i4
329bp
 fumarylacetoacetase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
10884 O_BomoMSG19798_complete:A_BomoMSG_c26521_g1_i4
170bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
10885 O_BomoMSG19799_5prime_partial:A_BomoMSG_c26521_g1_i5
189bp
 Fumarylacetoacetate_hydrolase_isoform_A_[Operophtera_brumata]
10886 O_BomoMSG1979_internal:A_BomoMSG_c9680_g1_i1
99bp
 tonsoku-like_protein_[Helicoverpa_armigera]
10887 O_BomoMSG197_internal:A_BomoMSG_c856_g1_i1
107bp
 hypothetical_protein_KGM_204970_[Danaus_plexippus_plexippus]
10888 O_BomoMSG19800_5prime_partial:A_BomoMSG_c26521_g1_i5
157bp
 fumarylacetoacetase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
10889 O_BomoMSG19801_3prime_partial:A_BomoMSG_c26521_g1_i5
153bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
10890 O_BomoMSG19802_internal:A_BomoMSG_c26522_g1_i1
358bp
 uncharacterized_protein_LOC101741590_isoform_X2_[Bombyx_mori]
previous next from show/29137

- SilkBase 1999-2023 -