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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10561 O_BomoMSG19506_5prime_partial:A_BomoMSG_c26451_g1_i3
151bp
10562 O_BomoMSG19507_3prime_partial:A_BomoMSG_c26451_g1_i3
113bp
 uncharacterized_protein_LOC101735977_isoform_X2_[Bombyx_mori]
10563 O_BomoMSG19508_3prime_partial:A_BomoMSG_c26451_g1_i4
323bp
 uncharacterized_protein_LOC101735977_isoform_X2_[Bombyx_mori]
10564 O_BomoMSG19509_5prime_partial:A_BomoMSG_c26451_g1_i4
151bp
10565 O_BomoMSG1950_internal:A_BomoMSG_c9545_g1_i1
165bp
 DNA_ligase_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005958 C DNA-dependent protein kinase-DNA ligase 4 complex
GO:0006260 P DNA replication
GO:0006273 P lagging strand elongation
GO:0006281 P DNA repair
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0032807 C DNA ligase IV complex
GO:0033152 P immunoglobulin V(D)J recombination
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0070419 C nonhomologous end joining complex
GO:0071897 P DNA biosynthetic process
10566 O_BomoMSG19510_internal:A_BomoMSG_c26451_g1_i5
110bp
 uncharacterized_protein_LOC101735977_isoform_X2_[Bombyx_mori]
10567 O_BomoMSG19511_internal:A_BomoMSG_c26451_g1_i5
110bp
10568 O_BomoMSG19512_internal:A_BomoMSG_c26453_g1_i1
102bp
 probable_phosphorylase_b_kinase_regulatory_subunit_beta_isoform_X4_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
10569 O_BomoMSG19513_5prime_partial:A_BomoMSG_c26453_g1_i2
388bp
 probable_phosphorylase_b_kinase_regulatory_subunit_beta_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
10570 O_BomoMSG19514_5prime_partial:A_BomoMSG_c26453_g1_i2
127bp
10571 O_BomoMSG19515_complete:A_BomoMSG_c26453_g1_i2
100bp
10572 O_BomoMSG19516_5prime_partial:A_BomoMSG_c26453_g1_i3
715bp
 probable_phosphorylase_b_kinase_regulatory_subunit_beta_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
10573 O_BomoMSG19517_5prime_partial:A_BomoMSG_c26453_g1_i3
127bp
10574 O_BomoMSG19518_complete:A_BomoMSG_c26453_g1_i3
100bp
10575 O_BomoMSG19519_5prime_partial:A_BomoMSG_c26453_g1_i4
720bp
 probable_phosphorylase_b_kinase_regulatory_subunit_beta_isoform_X3_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
10576 O_BomoMSG1951_internal:A_BomoMSG_c9547_g1_i1
116bp
 monocarboxylate_transporter_4_isoform_X3_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008028 F monocarboxylic acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
10577 O_BomoMSG19520_5prime_partial:A_BomoMSG_c26453_g1_i4
127bp
10578 O_BomoMSG19521_complete:A_BomoMSG_c26453_g1_i4
100bp
10579 O_BomoMSG19522_3prime_partial:A_BomoMSG_c26455_g1_i1
277bp
 DNA_replication_factor_Cdt1_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0007049 P cell cycle
10580 O_BomoMSG19523_3prime_partial:A_BomoMSG_c26456_g1_i1
608bp
 myb-like_protein_I_isoform_X6_[Bombyx_mori]
10581 O_BomoMSG19524_3prime_partial:A_BomoMSG_c26456_g1_i2
638bp
 myb-like_protein_I_isoform_X6_[Bombyx_mori]
10582 O_BomoMSG19525_5prime_partial:A_BomoMSG_c26457_g1_i1
167bp
 eye-specific_diacylglycerol_kinase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004143 F diacylglycerol kinase activity
GO:0005524 F ATP binding
GO:0005875 C microtubule associated complex
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0007015 P actin filament organization
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0007601 P visual perception
GO:0007602 P phototransduction
GO:0007605 P sensory perception of sound
GO:0007608 P sensory perception of smell
GO:0016020 C membrane
GO:0016056 P rhodopsin mediated signaling pathway
GO:0016059 P deactivation of rhodopsin mediated signaling
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019992 F diacylglycerol binding
GO:0035556 P intracellular signal transduction
GO:0043052 P thermotaxis
GO:0045494 P photoreceptor cell maintenance
GO:0046834 P lipid phosphorylation
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
10583 O_BomoMSG19526_complete:A_BomoMSG_c26457_g1_i2
978bp
 eye-specific_diacylglycerol_kinase_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004143 F diacylglycerol kinase activity
GO:0005524 F ATP binding
GO:0005875 C microtubule associated complex
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0007015 P actin filament organization
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0007601 P visual perception
GO:0007602 P phototransduction
GO:0007605 P sensory perception of sound
GO:0007608 P sensory perception of smell
GO:0016020 C membrane
GO:0016056 P rhodopsin mediated signaling pathway
GO:0016059 P deactivation of rhodopsin mediated signaling
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019992 F diacylglycerol binding
GO:0035556 P intracellular signal transduction
GO:0043052 P thermotaxis
GO:0045494 P photoreceptor cell maintenance
GO:0046834 P lipid phosphorylation
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
10584 O_BomoMSG19527_5prime_partial:A_BomoMSG_c26458_g1_i1
408bp
 trafficking_kinesin-binding_protein_milt_isoform_X2_[Bombyx_mori]
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005739 C mitochondrion
GO:0007287 P Nebenkern assembly
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0017022 F myosin binding
GO:0019233 P sensory perception of pain
GO:0019895 F obsolete kinesin-associated mitochondrial adaptor activity
GO:0019896 P axonal transport of mitochondrion
GO:0030382 P sperm mitochondrion organization
GO:0048311 P mitochondrion distribution
GO:0051654 P establishment of mitochondrion localization
GO:1904115 C axon cytoplasm
10585 O_BomoMSG19528_complete:A_BomoMSG_c26458_g1_i1
178bp
10586 O_BomoMSG19529_5prime_partial:A_BomoMSG_c26458_g1_i1
113bp
10587 O_BomoMSG1952_internal:A_BomoMSG_c9548_g1_i1
136bp
 calreticulin_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005509 F calcium ion binding
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006457 P protein folding
GO:0008150 P biological_process
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
GO:0051082 F unfolded protein binding
10588 O_BomoMSG19530_5prime_partial:A_BomoMSG_c26458_g1_i2
216bp
 trafficking_kinesin-binding_protein_milt_isoform_X2_[Bombyx_mori]
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005739 C mitochondrion
GO:0007287 P Nebenkern assembly
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0017022 F myosin binding
GO:0019233 P sensory perception of pain
GO:0019895 F obsolete kinesin-associated mitochondrial adaptor activity
GO:0019896 P axonal transport of mitochondrion
GO:0030382 P sperm mitochondrion organization
GO:0048311 P mitochondrion distribution
GO:0051654 P establishment of mitochondrion localization
GO:1904115 C axon cytoplasm
10589 O_BomoMSG19531_3prime_partial:A_BomoMSG_c26458_g1_i2
168bp
10590 O_BomoMSG19532_5prime_partial:A_BomoMSG_c26458_g1_i3
224bp
 trafficking_kinesin-binding_protein_milt_isoform_X2_[Bombyx_mori]
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005739 C mitochondrion
GO:0007287 P Nebenkern assembly
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0017022 F myosin binding
GO:0019233 P sensory perception of pain
GO:0019895 F obsolete kinesin-associated mitochondrial adaptor activity
GO:0019896 P axonal transport of mitochondrion
GO:0030382 P sperm mitochondrion organization
GO:0048311 P mitochondrion distribution
GO:0051654 P establishment of mitochondrion localization
GO:1904115 C axon cytoplasm
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