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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10471 O_BomoMSG19425_internal:A_BomoMSG_c26434_g1_i3
699bp
 axoneme-associated_protein_mst101(2)_isoform_X3_[Bombyx_mori]
10472 O_BomoMSG19426_complete:A_BomoMSG_c26434_g1_i3
233bp
10473 O_BomoMSG19427_complete:A_BomoMSG_c26435_g1_i1
262bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
10474 O_BomoMSG19428_3prime_partial:A_BomoMSG_c26435_g1_i2
549bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X4_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
10475 O_BomoMSG19429_complete:A_BomoMSG_c26435_g1_i3
267bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
10476 O_BomoMSG1942_internal:A_BomoMSG_c9497_g1_i1
165bp
 WD_repeat-containing_protein_24_[Helicoverpa_armigera]
10477 O_BomoMSG19430_complete:A_BomoMSG_c26436_g1_i1
151bp
 uncharacterized_protein_LOC110386797_[Bombyx_mori]
10478 O_BomoMSG19431_complete:A_BomoMSG_c26436_g1_i1
118bp
10479 O_BomoMSG19432_complete:A_BomoMSG_c26436_g1_i2
151bp
 uncharacterized_protein_LOC110386797_[Bombyx_mori]
10480 O_BomoMSG19433_complete:A_BomoMSG_c26436_g1_i2
118bp
10481 O_BomoMSG19434_complete:A_BomoMSG_c26436_g1_i3
151bp
 uncharacterized_protein_LOC110386797_[Bombyx_mori]
10482 O_BomoMSG19435_complete:A_BomoMSG_c26436_g1_i3
118bp
10483 O_BomoMSG19436_internal:A_BomoMSG_c26437_g1_i1
226bp
 m7GpppN-mRNA_hydrolase_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006402 P mRNA catabolic process
GO:0016442 C RISC complex
GO:0016787 F hydrolase activity
GO:0016896 F exoribonuclease activity, producing 5'-phosphomonoesters
GO:0030054 C cell junction
GO:0030145 F manganese ion binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043488 P regulation of mRNA stability
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0046872 F metal ion binding
GO:0050072 F m7G(5')pppN diphosphatase activity
GO:0071044 P histone mRNA catabolic process
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
10484 O_BomoMSG19437_3prime_partial:A_BomoMSG_c26437_g1_i2
383bp
 m7GpppN-mRNA_hydrolase_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006402 P mRNA catabolic process
GO:0016442 C RISC complex
GO:0016787 F hydrolase activity
GO:0016896 F exoribonuclease activity, producing 5'-phosphomonoesters
GO:0030054 C cell junction
GO:0030145 F manganese ion binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043488 P regulation of mRNA stability
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0046872 F metal ion binding
GO:0050072 F m7G(5')pppN diphosphatase activity
GO:0071044 P histone mRNA catabolic process
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
10485 O_BomoMSG19438_complete:A_BomoMSG_c26438_g1_i1
480bp
 hippocampus_abundant_transcript_1_protein_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
10486 O_BomoMSG19439_complete:A_BomoMSG_c26438_g1_i1
135bp
10487 O_BomoMSG1943_5prime_partial:A_BomoMSG_c9497_g1_i1
114bp
10488 O_BomoMSG19440_5prime_partial:A_BomoMSG_c26439_g1_i1
109bp
 E3_ubiquitin-protein_ligase_RNF181_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
10489 O_BomoMSG19441_complete:A_BomoMSG_c26439_g1_i2
147bp
 E3_ubiquitin-protein_ligase_RNF181_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
10490 O_BomoMSG19442_internal:A_BomoMSG_c26440_g1_i1
640bp
 tyrosine-protein_kinase_hopscotch_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001745 P compound eye morphogenesis
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003383 P apical constriction
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006959 P humoral immune response
GO:0006968 P cellular defense response
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007259 P receptor signaling pathway via JAK-STAT
GO:0007260 P tyrosine phosphorylation of STAT protein
GO:0007262 P regulation of receptor signaling pathway via JAK-STAT
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007350 P blastoderm segmentation
GO:0007365 P periodic partitioning
GO:0007399 P nervous system development
GO:0007424 P open tracheal system development
GO:0007442 P hindgut morphogenesis
GO:0007455 P eye-antennal disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007530 P sex determination
GO:0007538 P primary sex determination
GO:0007616 P long-term memory
GO:0008283 P cell population proliferation
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016318 P ommatidial rotation
GO:0016476 P regulation of embryonic cell shape
GO:0016740 F transferase activity
GO:0019827 P stem cell population maintenance
GO:0030097 P hemopoiesis
GO:0030707 P ovarian follicle cell development
GO:0030713 P ovarian follicle cell stalk formation
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035010 P encapsulation of foreign target
GO:0035167 P larval lymph gland hemopoiesis
GO:0035171 P lamellocyte differentiation
GO:0035172 P hemocyte proliferation
GO:0035206 P regulation of hemocyte proliferation
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042067 P establishment of ommatidial planar polarity
GO:0042078 P germ-line stem cell division
GO:0042386 P hemocyte differentiation
GO:0045087 P innate immune response
GO:0045317 P equator specification
GO:0045475 P locomotor rhythm
GO:0045610 P regulation of hemocyte differentiation
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0048103 P somatic stem cell division
GO:0048477 P oogenesis
GO:0048749 P compound eye development
GO:0051607 P defense response to virus
GO:0060031 P mediolateral intercalation
10491 O_BomoMSG19443_internal:A_BomoMSG_c26440_g1_i2
944bp
 tyrosine-protein_kinase_hopscotch_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001745 P compound eye morphogenesis
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003383 P apical constriction
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006959 P humoral immune response
GO:0006968 P cellular defense response
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007259 P receptor signaling pathway via JAK-STAT
GO:0007260 P tyrosine phosphorylation of STAT protein
GO:0007262 P regulation of receptor signaling pathway via JAK-STAT
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007350 P blastoderm segmentation
GO:0007365 P periodic partitioning
GO:0007399 P nervous system development
GO:0007424 P open tracheal system development
GO:0007442 P hindgut morphogenesis
GO:0007455 P eye-antennal disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007530 P sex determination
GO:0007538 P primary sex determination
GO:0007616 P long-term memory
GO:0008283 P cell population proliferation
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016318 P ommatidial rotation
GO:0016476 P regulation of embryonic cell shape
GO:0016740 F transferase activity
GO:0019827 P stem cell population maintenance
GO:0030097 P hemopoiesis
GO:0030707 P ovarian follicle cell development
GO:0030713 P ovarian follicle cell stalk formation
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035010 P encapsulation of foreign target
GO:0035167 P larval lymph gland hemopoiesis
GO:0035171 P lamellocyte differentiation
GO:0035172 P hemocyte proliferation
GO:0035206 P regulation of hemocyte proliferation
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042067 P establishment of ommatidial planar polarity
GO:0042078 P germ-line stem cell division
GO:0042386 P hemocyte differentiation
GO:0045087 P innate immune response
GO:0045317 P equator specification
GO:0045475 P locomotor rhythm
GO:0045610 P regulation of hemocyte differentiation
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0048103 P somatic stem cell division
GO:0048477 P oogenesis
GO:0048749 P compound eye development
GO:0051607 P defense response to virus
GO:0060031 P mediolateral intercalation
10492 O_BomoMSG19444_5prime_partial:A_BomoMSG_c26441_g1_i1
113bp
10493 O_BomoMSG19445_internal:A_BomoMSG_c26441_g1_i2
162bp
 S-adenosylhomocysteine_hydrolase-like_protein_1_isoform_X3_[Bombyx_mori]
GO:0004013 F adenosylhomocysteinase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006730 P one-carbon metabolic process
GO:0016787 F hydrolase activity
GO:0043231 C intracellular membrane-bounded organelle
10494 O_BomoMSG19446_3prime_partial:A_BomoMSG_c26441_g1_i3
223bp
 S-adenosylhomocysteine_hydrolase-like_protein_1_isoform_X4_[Bombyx_mori]
GO:0004013 F adenosylhomocysteinase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006730 P one-carbon metabolic process
GO:0016787 F hydrolase activity
GO:0043231 C intracellular membrane-bounded organelle
10495 O_BomoMSG19447_5prime_partial:A_BomoMSG_c26441_g2_i1
260bp
 S-adenosylhomocysteine_hydrolase-like_protein_1_isoform_X3_[Bombyx_mori]
GO:0004013 F adenosylhomocysteinase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006730 P one-carbon metabolic process
GO:0016787 F hydrolase activity
GO:0043231 C intracellular membrane-bounded organelle
10496 O_BomoMSG19448_complete:A_BomoMSG_c26441_g2_i1
140bp
 hypothetical_protein_OA50_05780_[Mameliella_alba]
10497 O_BomoMSG19449_3prime_partial:A_BomoMSG_c26441_g1_i5
223bp
 S-adenosylhomocysteine_hydrolase-like_protein_1_isoform_X4_[Bombyx_mori]
GO:0004013 F adenosylhomocysteinase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006730 P one-carbon metabolic process
GO:0016787 F hydrolase activity
GO:0043231 C intracellular membrane-bounded organelle
10498 O_BomoMSG1944_3prime_partial:A_BomoMSG_c9499_g1_i1
113bp
 phosphoribosylaminoimidazole_carboxylase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002121 P inter-male aggressive behavior
GO:0003824 F catalytic activity
GO:0004638 F phosphoribosylaminoimidazole carboxylase activity
GO:0004639 F phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0016874 F ligase activity
GO:0046084 P adenine biosynthetic process
10499 O_BomoMSG19450_complete:A_BomoMSG_c26441_g1_i5
105bp
10500 O_BomoMSG19451_internal:A_BomoMSG_c26442_g1_i1
652bp
 protein_lap4_isoform_X5_[Bombyx_mori]
GO:0001843 P neural tube closure
GO:0001921 P positive regulation of receptor recycling
GO:0002093 P auditory receptor cell morphogenesis
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0007275 P multicellular organism development
GO:0008105 P protein localization
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016080 P synaptic vesicle targeting
GO:0016323 C basolateral plasma membrane
GO:0016331 P morphogenesis of embryonic epithelium
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0021747 P cochlear nucleus development
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0031252 C cell leading edge
GO:0034750 C Scrib-APC-beta-catenin complex
GO:0035089 P establishment of apical/basal cell polarity
GO:0035748 C myelin sheath abaxonal region
GO:0042060 P wound healing
GO:0042734 C presynaptic membrane
GO:0042995 C cell projection
GO:0043065 P positive regulation of apoptotic process
GO:0043615 P astrocyte cell migration
GO:0045211 C postsynaptic membrane
GO:0045930 P negative regulation of mitotic cell cycle
GO:0048488 P synaptic vesicle endocytosis
GO:0050918 P positive chemotaxis
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060561 P apoptotic process involved in morphogenesis
GO:0060603 P mammary gland duct morphogenesis
GO:0070062 C extracellular exosome
GO:0071896 P protein localization to adherens junction
GO:0090630 P activation of GTPase activity
GO:0098793 C presynapse
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