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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10411 O_BomoMSG19371_3prime_partial:A_BomoMSG_c26422_g1_i1
512bp
 uncharacterized_protein_LOC101735402_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
10412 O_BomoMSG19372_5prime_partial:A_BomoMSG_c26422_g1_i1
194bp
10413 O_BomoMSG19373_complete:A_BomoMSG_c26422_g1_i1
120bp
10414 O_BomoMSG19374_complete:A_BomoMSG_c26424_g1_i3
422bp
 PREDICTED:_uncharacterized_protein_LOC106134689_[Amyelois_transitella]
10415 O_BomoMSG19375_3prime_partial:A_BomoMSG_c26425_g1_i1
562bp
 protein_draper_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005886 C plasma membrane
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0034109 P homotypic cell-cell adhesion
10416 O_BomoMSG19376_5prime_partial:A_BomoMSG_c26425_g1_i1
345bp
10417 O_BomoMSG19377_complete:A_BomoMSG_c26425_g1_i1
239bp
10418 O_BomoMSG19378_5prime_partial:A_BomoMSG_c26425_g1_i1
119bp
10419 O_BomoMSG19379_internal:A_BomoMSG_c26425_g1_i2
318bp
10420 O_BomoMSG1937_internal:A_BomoMSG_c9467_g1_i1
114bp
 PREDICTED:_uncharacterized_protein_LOC105389752_[Plutella_xylostella]
10421 O_BomoMSG19380_internal:A_BomoMSG_c26425_g1_i2
318bp
 protein_draper_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0034109 P homotypic cell-cell adhesion
10422 O_BomoMSG19381_5prime_partial:A_BomoMSG_c26425_g1_i2
233bp
10423 O_BomoMSG19382_5prime_partial:A_BomoMSG_c26425_g1_i2
119bp
10424 O_BomoMSG19383_3prime_partial:A_BomoMSG_c26425_g1_i3
562bp
 protein_draper_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005886 C plasma membrane
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0034109 P homotypic cell-cell adhesion
10425 O_BomoMSG19384_5prime_partial:A_BomoMSG_c26425_g1_i3
345bp
10426 O_BomoMSG19385_complete:A_BomoMSG_c26425_g1_i3
239bp
10427 O_BomoMSG19386_5prime_partial:A_BomoMSG_c26425_g1_i3
119bp
10428 O_BomoMSG19387_3prime_partial:A_BomoMSG_c26425_g1_i4
562bp
 protein_draper_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005886 C plasma membrane
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0034109 P homotypic cell-cell adhesion
10429 O_BomoMSG19388_5prime_partial:A_BomoMSG_c26425_g1_i4
345bp
10430 O_BomoMSG19389_complete:A_BomoMSG_c26425_g1_i4
239bp
10431 O_BomoMSG1938_internal:A_BomoMSG_c9478_g1_i1
119bp
 LOW_QUALITY_PROTEIN:_dynein_heavy_chain_10,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0030286 C dynein complex
GO:0042995 C cell projection
10432 O_BomoMSG19390_5prime_partial:A_BomoMSG_c26425_g1_i4
119bp
10433 O_BomoMSG19391_3prime_partial:A_BomoMSG_c26425_g1_i5
562bp
 protein_draper_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005886 C plasma membrane
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0034109 P homotypic cell-cell adhesion
10434 O_BomoMSG19392_5prime_partial:A_BomoMSG_c26425_g1_i5
345bp
10435 O_BomoMSG19393_complete:A_BomoMSG_c26425_g1_i5
239bp
10436 O_BomoMSG19394_5prime_partial:A_BomoMSG_c26425_g1_i5
119bp
10437 O_BomoMSG19395_internal:A_BomoMSG_c26426_g1_i1
279bp
 alpha-mannosidase_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559 F alpha-mannosidase activity
GO:0004572 F mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005975 P carbohydrate metabolic process
GO:0006013 P mannose metabolic process
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006491 P N-glycan processing
GO:0006517 P protein deglycosylation
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0015923 F mannosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016063 P rhodopsin biosynthetic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030246 F carbohydrate binding
GO:0035010 P encapsulation of foreign target
GO:0046872 F metal ion binding
10438 O_BomoMSG19396_3prime_partial:A_BomoMSG_c26426_g1_i2
687bp
 alpha-mannosidase_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559 F alpha-mannosidase activity
GO:0004572 F mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005975 P carbohydrate metabolic process
GO:0006013 P mannose metabolic process
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006491 P N-glycan processing
GO:0006517 P protein deglycosylation
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0015923 F mannosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016063 P rhodopsin biosynthetic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030246 F carbohydrate binding
GO:0035010 P encapsulation of foreign target
GO:0046872 F metal ion binding
10439 O_BomoMSG19397_complete:A_BomoMSG_c26427_g1_i1
555bp
 protein_AATF_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006357 P regulation of transcription by RNA polymerase II
10440 O_BomoMSG19398_5prime_partial:A_BomoMSG_c26427_g1_i2
357bp
 protein_AATF_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006357 P regulation of transcription by RNA polymerase II
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