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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9991 O_BomoASG18994_complete:A_BomoASG_c30404_g3_i1
139bp
 protein_yippee-like_CG15309_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0046872 F metal ion binding
9992 O_BomoASG18995_complete:A_BomoASG_c30405_g1_i1
1142bp
 phosphatidylinositide_phosphatase_SAC2_isoform_X2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005905 C clathrin-coated pit
GO:0008152 P metabolic process
GO:0008934 F inositol monophosphate 1-phosphatase activity
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0042578 F phosphoric ester hydrolase activity
GO:0042803 F protein homodimerization activity
GO:0045334 C clathrin-coated endocytic vesicle
GO:0052832 F inositol monophosphate 3-phosphatase activity
GO:0052833 F inositol monophosphate 4-phosphatase activity
GO:0052834 F inositol monophosphate phosphatase activity
GO:0055037 C recycling endosome
GO:0072583 P clathrin-dependent endocytosis
GO:2001135 P regulation of endocytic recycling
9993 O_BomoASG18996_complete:A_BomoASG_c30405_g1_i2
552bp
 phosphatidylinositide_phosphatase_SAC2_isoform_X2_[Bombyx_mori]
GO:0001921 P positive regulation of receptor recycling
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005905 C clathrin-coated pit
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0008934 F inositol monophosphate 1-phosphatase activity
GO:0014898 P cardiac muscle hypertrophy in response to stress
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0030487 F inositol-4,5-bisphosphate 5-phosphatase activity
GO:0031161 P phosphatidylinositol catabolic process
GO:0031901 C early endosome membrane
GO:0034595 F phosphatidylinositol phosphate 5-phosphatase activity
GO:0034596 F phosphatidylinositol phosphate 4-phosphatase activity
GO:0042518 P negative regulation of tyrosine phosphorylation of STAT protein
GO:0042578 F phosphoric ester hydrolase activity
GO:0042803 F protein homodimerization activity
GO:0045334 C clathrin-coated endocytic vesicle
GO:0046856 P phosphatidylinositol dephosphorylation
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0048681 P negative regulation of axon regeneration
GO:0051896 P regulation of protein kinase B signaling
GO:0052832 F inositol monophosphate 3-phosphatase activity
GO:0052833 F inositol monophosphate 4-phosphatase activity
GO:0052834 F inositol monophosphate phosphatase activity
GO:0055037 C recycling endosome
GO:0072583 P clathrin-dependent endocytosis
GO:2000145 P regulation of cell motility
GO:2001135 P regulation of endocytic recycling
9994 O_BomoASG18997_5prime_partial:A_BomoASG_c30405_g1_i3
574bp
 phosphatidylinositide_phosphatase_SAC2_isoform_X2_[Bombyx_mori]
GO:0001921 P positive regulation of receptor recycling
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005905 C clathrin-coated pit
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0008934 F inositol monophosphate 1-phosphatase activity
GO:0014898 P cardiac muscle hypertrophy in response to stress
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0030487 F inositol-4,5-bisphosphate 5-phosphatase activity
GO:0031161 P phosphatidylinositol catabolic process
GO:0031901 C early endosome membrane
GO:0034595 F phosphatidylinositol phosphate 5-phosphatase activity
GO:0034596 F phosphatidylinositol phosphate 4-phosphatase activity
GO:0042518 P negative regulation of tyrosine phosphorylation of STAT protein
GO:0042578 F phosphoric ester hydrolase activity
GO:0042803 F protein homodimerization activity
GO:0045334 C clathrin-coated endocytic vesicle
GO:0046856 P phosphatidylinositol dephosphorylation
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0048681 P negative regulation of axon regeneration
GO:0051896 P regulation of protein kinase B signaling
GO:0052832 F inositol monophosphate 3-phosphatase activity
GO:0052833 F inositol monophosphate 4-phosphatase activity
GO:0052834 F inositol monophosphate phosphatase activity
GO:0055037 C recycling endosome
GO:0072583 P clathrin-dependent endocytosis
GO:2000145 P regulation of cell motility
GO:2001135 P regulation of endocytic recycling
9995 O_BomoASG18998_complete:A_BomoASG_c30405_g1_i4
1147bp
 phosphatidylinositide_phosphatase_SAC2_isoform_X1_[Bombyx_mori]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005905 C clathrin-coated pit
GO:0008152 P metabolic process
GO:0008934 F inositol monophosphate 1-phosphatase activity
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0042578 F phosphoric ester hydrolase activity
GO:0042803 F protein homodimerization activity
GO:0045334 C clathrin-coated endocytic vesicle
GO:0052832 F inositol monophosphate 3-phosphatase activity
GO:0052833 F inositol monophosphate 4-phosphatase activity
GO:0052834 F inositol monophosphate phosphatase activity
GO:0055037 C recycling endosome
GO:0072583 P clathrin-dependent endocytosis
GO:2001135 P regulation of endocytic recycling
9996 O_BomoASG18999_5prime_partial:A_BomoASG_c30406_g1_i1
298bp
 vacuolar_protein_sorting-associated_protein_37A_[Bombyx_mori]
GO:0000813 C ESCRT I complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005813 C centrosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031902 C late endosome membrane
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043231 C intracellular membrane-bounded organelle
9997 O_BomoASG1899_complete:A_BomoASG_c12202_g1_i1
238bp
 phosphatidylinositol-glycan_biosynthesis_class_F_protein_[Bombyx_mori]
GO:0004307 F ethanolaminephosphotransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016254 P preassembly of GPI anchor in ER membrane
9998 O_BomoASG189_internal:A_BomoASG_c1526_g1_i1
144bp
 uncharacterized_protein_LOC110385577_[Bombyx_mori]
9999 O_BomoASG18_complete:A_BomoASG_c131_g1_i1
102bp
10000 O_BomoASG19000_complete:A_BomoASG_c30406_g1_i2
304bp
 vacuolar_protein_sorting-associated_protein_37A_[Bombyx_mori]
GO:0000813 C ESCRT I complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005813 C centrosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031902 C late endosome membrane
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043231 C intracellular membrane-bounded organelle
10001 O_BomoASG19001_5prime_partial:A_BomoASG_c30407_g1_i1
127bp
 tubulin-specific_chaperone_cofactor_E-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
10002 O_BomoASG19002_5prime_partial:A_BomoASG_c30407_g1_i1
110bp
10003 O_BomoASG19003_5prime_partial:A_BomoASG_c30407_g1_i2
181bp
 tubulin-specific_chaperone_cofactor_E-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
10004 O_BomoASG19004_5prime_partial:A_BomoASG_c30407_g1_i2
110bp
10005 O_BomoASG19005_complete:A_BomoASG_c30407_g1_i3
463bp
 tubulin-specific_chaperone_cofactor_E-like_protein_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
10006 O_BomoASG19006_5prime_partial:A_BomoASG_c30407_g1_i3
110bp
10007 O_BomoASG19007_3prime_partial:A_BomoASG_c30408_g1_i1
157bp
 ATP_binding_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
GO:0098519 F nucleotide phosphatase activity, acting on free nucleotides
10008 O_BomoASG19008_3prime_partial:A_BomoASG_c30408_g1_i1
150bp
10009 O_BomoASG19009_3prime_partial:A_BomoASG_c30410_g1_i1
442bp
 proton-coupled_amino_acid_transporter-like_protein_CG1139_isoform_X1_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015808 P L-alanine transport
GO:0015824 P proline transport
GO:0015827 P tryptophan transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
10010 O_BomoASG1900_5prime_partial:A_BomoASG_c12205_g1_i1
101bp
 uncharacterized_protein_LOC101735450_isoform_X1_[Bombyx_mori]
10011 O_BomoASG19010_3prime_partial:A_BomoASG_c30410_g1_i2
442bp
 proton-coupled_amino_acid_transporter-like_protein_CG1139_isoform_X1_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015808 P L-alanine transport
GO:0015824 P proline transport
GO:0015827 P tryptophan transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
10012 O_BomoASG19011_internal:A_BomoASG_c30410_g1_i3
331bp
 proton-coupled_amino_acid_transporter-like_protein_CG1139_isoform_X1_[Bombyx_mori]
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
10013 O_BomoASG19012_complete:A_BomoASG_c30411_g1_i1
129bp
 uncharacterized_protein_LOC101745092_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022625 C cytosolic large ribosomal subunit
GO:0031305 C integral component of mitochondrial inner membrane
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0033617 P mitochondrial cytochrome c oxidase assembly
10014 O_BomoASG19013_complete:A_BomoASG_c30411_g1_i3
138bp
 U7_snRNA-associated_Sm-like_protein_LSm10_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005683 C U7 snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0017069 F snRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0071208 F histone pre-mRNA DCP binding
GO:0071209 F U7 snRNA binding
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
10015 O_BomoASG19014_5prime_partial:A_BomoASG_c30412_g1_i1
372bp
 X-ray_repair_cross-complementing_protein_6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042162 F telomeric DNA binding
GO:0043564 C Ku70:Ku80 complex
10016 O_BomoASG19015_complete:A_BomoASG_c30412_g1_i1
114bp
10017 O_BomoASG19016_internal:A_BomoASG_c30413_g1_i1
231bp
 DNA_polymerase_delta_catalytic_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006272 P leading strand elongation
GO:0006273 P lagging strand elongation
GO:0006287 P base-excision repair, gap-filling
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0043625 C delta DNA polymerase complex
GO:0045004 P DNA replication proofreading
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
10018 O_BomoASG19017_3prime_partial:A_BomoASG_c30413_g1_i2
413bp
 DNA_polymerase_delta_catalytic_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006272 P leading strand elongation
GO:0006273 P lagging strand elongation
GO:0006287 P base-excision repair, gap-filling
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0043625 C delta DNA polymerase complex
GO:0045004 P DNA replication proofreading
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
10019 O_BomoASG19018_3prime_partial:A_BomoASG_c30413_g1_i3
409bp
 DNA_polymerase_delta_catalytic_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006272 P leading strand elongation
GO:0006273 P lagging strand elongation
GO:0006287 P base-excision repair, gap-filling
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0043625 C delta DNA polymerase complex
GO:0045004 P DNA replication proofreading
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
10020 O_BomoASG19019_internal:A_BomoASG_c30414_g1_i1
586bp
 DNA-directed_RNA_polymerase,_mitochondrial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006351 P transcription, DNA-templated
GO:0006390 P mitochondrial transcription
GO:0006391 P transcription initiation from mitochondrial promoter
GO:0007005 P mitochondrion organization
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
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