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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9751 O_BomoASG18778_5prime_partial:A_BomoASG_c30323_g1_i1
177bp
 vitellogenin_receptor_precursor_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
9752 O_BomoASG18779_complete:A_BomoASG_c30323_g1_i1
138bp
9753 O_BomoASG1877_internal:A_BomoASG_c12117_g1_i1
139bp
 myosin-IB_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005903 C brush border
GO:0005938 C cell cortex
GO:0007368 P determination of left/right symmetry
GO:0007498 P mesoderm development
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0031941 C filamentous actin
GO:0032528 P microvillus organization
GO:0042623 F ATP hydrolysis activity
GO:0042742 P defense response to bacterium
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0071907 P determination of digestive tract left/right asymmetry
9754 O_BomoASG18780_complete:A_BomoASG_c30323_g1_i1
112bp
9755 O_BomoASG18781_complete:A_BomoASG_c30323_g1_i2
254bp
9756 O_BomoASG18782_complete:A_BomoASG_c30323_g1_i2
192bp
 vitellogenin_receptor,_partial_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
9757 O_BomoASG18783_5prime_partial:A_BomoASG_c30323_g1_i2
177bp
 vitellogenin_receptor_precursor_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
9758 O_BomoASG18784_complete:A_BomoASG_c30323_g1_i2
138bp
9759 O_BomoASG18785_3prime_partial:A_BomoASG_c30325_g1_i2
114bp
 la-related_protein_7_isoform_X2_[Bombyx_mori]
9760 O_BomoASG18786_3prime_partial:A_BomoASG_c30325_g1_i3
448bp
 la-related_protein_7_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006396 P RNA processing
GO:0030529 C ribonucleoprotein complex
9761 O_BomoASG18787_complete:A_BomoASG_c30325_g1_i3
102bp
9762 O_BomoASG18788_5prime_partial:A_BomoASG_c30327_g1_i1
394bp
 MICAL-like_protein_1_isoform_X1_[Bombyx_mori]
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0019898 C extrinsic component of membrane
GO:0031175 P neuron projection development
GO:0031902 C late endosome membrane
GO:0032456 P endocytic recycling
GO:0032458 P slow endocytic recycling
GO:0036010 P protein localization to endosome
GO:0042802 F identical protein binding
GO:0046872 F metal ion binding
GO:0055038 C recycling endosome membrane
GO:0070300 F phosphatidic acid binding
GO:0097320 P plasma membrane tubulation
GO:1990090 P cellular response to nerve growth factor stimulus
GO:1990126 P endocytic recycling
9763 O_BomoASG18789_complete:A_BomoASG_c30327_g1_i1
151bp
9764 O_BomoASG1878_internal:A_BomoASG_c12119_g1_i1
148bp
 gag_pol_polyprotein_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
9765 O_BomoASG18790_5prime_partial:A_BomoASG_c30327_g1_i2
649bp
 MICAL-like_protein_1_isoform_X1_[Bombyx_mori]
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0019898 C extrinsic component of membrane
GO:0031175 P neuron projection development
GO:0031902 C late endosome membrane
GO:0032456 P endocytic recycling
GO:0032458 P slow endocytic recycling
GO:0036010 P protein localization to endosome
GO:0042802 F identical protein binding
GO:0046872 F metal ion binding
GO:0055038 C recycling endosome membrane
GO:0070300 F phosphatidic acid binding
GO:0097320 P plasma membrane tubulation
GO:1990090 P cellular response to nerve growth factor stimulus
GO:1990126 P endocytic recycling
9766 O_BomoASG18791_complete:A_BomoASG_c30327_g1_i2
151bp
9767 O_BomoASG18792_5prime_partial:A_BomoASG_c30327_g1_i3
743bp
 MICAL-like_protein_1_isoform_X1_[Bombyx_mori]
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0019898 C extrinsic component of membrane
GO:0031175 P neuron projection development
GO:0031902 C late endosome membrane
GO:0032456 P endocytic recycling
GO:0032458 P slow endocytic recycling
GO:0036010 P protein localization to endosome
GO:0042802 F identical protein binding
GO:0046872 F metal ion binding
GO:0055038 C recycling endosome membrane
GO:0070300 F phosphatidic acid binding
GO:0097320 P plasma membrane tubulation
GO:1990090 P cellular response to nerve growth factor stimulus
GO:1990126 P endocytic recycling
9768 O_BomoASG18793_complete:A_BomoASG_c30327_g1_i3
151bp
9769 O_BomoASG18794_complete:A_BomoASG_c30328_g1_i1
275bp
 tetraspanin-5_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019899 F enzyme binding
GO:0045747 P positive regulation of Notch signaling pathway
GO:0051604 P protein maturation
GO:0090002 P protein localization to plasma membrane
9770 O_BomoASG18795_5prime_partial:A_BomoASG_c30329_g2_i2
565bp
 digestive_cysteine_proteinase_1_isoform_X1_[Bombyx_mori]
GO:0004197 F cysteine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008234 F cysteine-type peptidase activity
GO:0016049 P cell growth
GO:0030435 P sporulation resulting in formation of a cellular spore
GO:0031288 P sorocarp morphogenesis
GO:0031410 C cytoplasmic vesicle
GO:0044351 P macropinocytosis
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0072659 P protein localization to plasma membrane
GO:1903665 P negative regulation of asexual reproduction
GO:1903669 P positive regulation of chemorepellent activity
9771 O_BomoASG18796_complete:A_BomoASG_c30329_g2_i2
286bp
9772 O_BomoASG18797_complete:A_BomoASG_c30330_g1_i1
323bp
 ubiquitin_carboxyl-terminal_hydrolase_isozyme_L5_isoform_X2_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0004843 F thiol-dependent deubiquitinase
GO:0004866 F endopeptidase inhibitor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021670 P lateral ventricle development
GO:0030901 P midbrain development
GO:0031011 C Ino80 complex
GO:0036459 F thiol-dependent deubiquitinase
GO:0044822 F RNA binding
GO:0048853 P forebrain morphogenesis
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0070628 F proteasome binding
9773 O_BomoASG18798_complete:A_BomoASG_c30330_g1_i1
102bp
9774 O_BomoASG18799_complete:A_BomoASG_c30330_g1_i2
323bp
 ubiquitin_carboxyl-terminal_hydrolase_isozyme_L5_isoform_X2_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0004843 F thiol-dependent deubiquitinase
GO:0004866 F endopeptidase inhibitor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021670 P lateral ventricle development
GO:0030901 P midbrain development
GO:0031011 C Ino80 complex
GO:0036459 F thiol-dependent deubiquitinase
GO:0044822 F RNA binding
GO:0048853 P forebrain morphogenesis
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0070628 F proteasome binding
9775 O_BomoASG1879_complete:A_BomoASG_c12132_g1_i1
363bp
 proteasome_26S_non-ATPase_subunit_4_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000502 C proteasome complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005838 C proteasome regulatory particle
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043248 P proteasome assembly
9776 O_BomoASG187_internal:A_BomoASG_c1515_g1_i1
103bp
 putative_fatty_acyl-CoA_reductase_CG5065_isoform_X2_[Bombyx_mori]
9777 O_BomoASG18800_complete:A_BomoASG_c30330_g1_i2
102bp
9778 O_BomoASG18801_complete:A_BomoASG_c30330_g1_i3
323bp
 ubiquitin_carboxyl-terminal_hydrolase_isozyme_L5_isoform_X2_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0004843 F thiol-dependent deubiquitinase
GO:0004866 F endopeptidase inhibitor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021670 P lateral ventricle development
GO:0030901 P midbrain development
GO:0031011 C Ino80 complex
GO:0036459 F thiol-dependent deubiquitinase
GO:0044822 F RNA binding
GO:0048853 P forebrain morphogenesis
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0070628 F proteasome binding
9779 O_BomoASG18802_complete:A_BomoASG_c30330_g1_i3
102bp
9780 O_BomoASG18803_3prime_partial:A_BomoASG_c30332_g1_i1
306bp
 E3_ubiquitin-protein_ligase_Hakai_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0007162 P negative regulation of cell adhesion
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030155 P regulation of cell adhesion
GO:0030335 P positive regulation of cell migration
GO:0045807 P positive regulation of endocytosis
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
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