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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9661 O_BomoASG18697_complete:A_BomoASG_c30298_g1_i3
339bp
 uncharacterized_protein_LOC101742337_isoform_X1_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031519 C PcG protein complex
GO:0035167 P larval lymph gland hemopoiesis
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
9662 O_BomoASG18698_3prime_partial:A_BomoASG_c30299_g1_i1
430bp
 tRNA_(adenine(58)-N(1))-methyltransferase_non-catalytic_subunit_TRM6_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0030488 P tRNA methylation
GO:0031515 C tRNA (m1A) methyltransferase complex
GO:0044822 F RNA binding
9663 O_BomoASG18699_3prime_partial:A_BomoASG_c30299_g1_i2
434bp
 tRNA_(adenine(58)-N(1))-methyltransferase_non-catalytic_subunit_TRM6_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0030488 P tRNA methylation
GO:0031515 C tRNA (m1A) methyltransferase complex
GO:0044822 F RNA binding
9664 O_BomoASG1869_complete:A_BomoASG_c12098_g1_i1
140bp
 protein_FAM177A1_[Bombyx_mori]
9665 O_BomoASG186_internal:A_BomoASG_c1515_g1_i1
103bp
9666 O_BomoASG18700_complete:A_BomoASG_c30302_g2_i2
117bp
 PREDICTED:_uncharacterized_protein_LOC106136806_isoform_X2_[Amyelois_transitella]
9667 O_BomoASG18701_complete:A_BomoASG_c30302_g2_i3
117bp
 PREDICTED:_uncharacterized_protein_LOC106136806_isoform_X2_[Amyelois_transitella]
9668 O_BomoASG18702_internal:A_BomoASG_c30303_g1_i1
516bp
 anaphase-promoting_complex_subunit_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005680 C anaphase-promoting complex
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016567 P protein ubiquitination
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051301 P cell division
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0051439 P obsolete regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0070979 P protein K11-linked ubiquitination
9669 O_BomoASG18703_5prime_partial:A_BomoASG_c30303_g1_i1
120bp
9670 O_BomoASG18704_complete:A_BomoASG_c30303_g1_i1
105bp
9671 O_BomoASG18705_complete:A_BomoASG_c30303_g1_i1
105bp
9672 O_BomoASG18706_5prime_partial:A_BomoASG_c30303_g1_i1
103bp
9673 O_BomoASG18707_internal:A_BomoASG_c30303_g1_i2
712bp
 anaphase-promoting_complex_subunit_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005680 C anaphase-promoting complex
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016567 P protein ubiquitination
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051301 P cell division
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0051439 P obsolete regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0070979 P protein K11-linked ubiquitination
9674 O_BomoASG18708_5prime_partial:A_BomoASG_c30303_g1_i2
120bp
9675 O_BomoASG18709_complete:A_BomoASG_c30303_g1_i2
105bp
9676 O_BomoASG1870_internal:A_BomoASG_c12105_g1_i1
123bp
9677 O_BomoASG18710_complete:A_BomoASG_c30303_g1_i2
105bp
9678 O_BomoASG18711_5prime_partial:A_BomoASG_c30303_g1_i2
103bp
9679 O_BomoASG18712_internal:A_BomoASG_c30303_g1_i3
534bp
 anaphase-promoting_complex_subunit_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005680 C anaphase-promoting complex
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016567 P protein ubiquitination
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051301 P cell division
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0051439 P obsolete regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0070979 P protein K11-linked ubiquitination
9680 O_BomoASG18713_5prime_partial:A_BomoASG_c30303_g1_i3
120bp
9681 O_BomoASG18714_complete:A_BomoASG_c30303_g1_i3
105bp
9682 O_BomoASG18715_complete:A_BomoASG_c30303_g1_i3
105bp
9683 O_BomoASG18716_5prime_partial:A_BomoASG_c30303_g1_i3
103bp
9684 O_BomoASG18717_complete:A_BomoASG_c30304_g1_i1
485bp
 tRNA_(guanine(10)-N2)-methyltransferase_homolog_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
9685 O_BomoASG18718_complete:A_BomoASG_c30308_g1_i1
376bp
 neuropeptide_receptor_A13_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008528 F G protein-coupled peptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045434 P negative regulation of female receptivity, post-mating
GO:0048042 P regulation of oviposition
9686 O_BomoASG18719_complete:A_BomoASG_c30308_g1_i2
389bp
 neuropeptide_receptor_A13_isoform_X2_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008528 F G protein-coupled peptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045434 P negative regulation of female receptivity, post-mating
GO:0048042 P regulation of oviposition
9687 O_BomoASG1871_5prime_partial:A_BomoASG_c12105_g1_i1
112bp
 serine/threonine-protein_kinase_ATR_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0018105 P peptidyl-serine phosphorylation
GO:0046982 F protein heterodimerization activity
9688 O_BomoASG18720_5prime_partial:A_BomoASG_c30308_g1_i2
111bp
9689 O_BomoASG18721_complete:A_BomoASG_c30308_g1_i3
401bp
 neuropeptide_receptor_A13_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008528 F G protein-coupled peptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045434 P negative regulation of female receptivity, post-mating
GO:0048042 P regulation of oviposition
9690 O_BomoASG18722_complete:A_BomoASG_c30308_g1_i5
390bp
 neuropeptide_receptor_A13_isoform_X1_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008528 F G protein-coupled peptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045434 P negative regulation of female receptivity, post-mating
GO:0048042 P regulation of oviposition
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