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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9631 O_BomoASG1866_3prime_partial:A_BomoASG_c12091_g1_i1
185bp
 ras_GTPase-activating_protein-binding_protein_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0007264 P small GTPase mediated signal transduction
GO:0044822 F RNA binding
GO:0051028 P mRNA transport
9632 O_BomoASG18670_internal:A_BomoASG_c30286_g1_i2
252bp
 multidrug_resistance-associated_protein_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043225 F ATPase-coupled inorganic anion transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0098656 P anion transmembrane transport
9633 O_BomoASG18671_5prime_partial:A_BomoASG_c30287_g1_i1
147bp
 tyrosine-protein_kinase_Src64B_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007300 P ovarian nurse cell to oocyte transport
GO:0007301 P female germline ring canal formation
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007411 P axon guidance
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007611 P learning or memory
GO:0007616 P long-term memory
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008302 P female germline ring canal formation, actin assembly
GO:0008335 P female germline ring canal stabilization
GO:0008355 P olfactory learning
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016319 P mushroom body development
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030036 P actin cytoskeleton organization
GO:0030046 P parallel actin filament bundle assembly
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030717 P oocyte karyosome formation
GO:0030723 P ovarian fusome organization
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0034332 P adherens junction organization
GO:0036058 P filtration diaphragm assembly
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0045172 C germline ring canal
GO:0045860 P positive regulation of protein kinase activity
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0048477 P oogenesis
GO:0090136 P epithelial cell-cell adhesion
9634 O_BomoASG18672_complete:A_BomoASG_c30287_g1_i2
522bp
 tyrosine-protein_kinase_Src64B_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007300 P ovarian nurse cell to oocyte transport
GO:0007301 P female germline ring canal formation
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007411 P axon guidance
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007611 P learning or memory
GO:0007616 P long-term memory
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008302 P female germline ring canal formation, actin assembly
GO:0008335 P female germline ring canal stabilization
GO:0008355 P olfactory learning
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016319 P mushroom body development
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030036 P actin cytoskeleton organization
GO:0030046 P parallel actin filament bundle assembly
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030717 P oocyte karyosome formation
GO:0030723 P ovarian fusome organization
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0034332 P adherens junction organization
GO:0036058 P filtration diaphragm assembly
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0045172 C germline ring canal
GO:0045860 P positive regulation of protein kinase activity
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0048477 P oogenesis
GO:0090136 P epithelial cell-cell adhesion
9635 O_BomoASG18673_5prime_partial:A_BomoASG_c30287_g1_i3
399bp
 tyrosine-protein_kinase_Src64B_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007300 P ovarian nurse cell to oocyte transport
GO:0007301 P female germline ring canal formation
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007411 P axon guidance
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007611 P learning or memory
GO:0007616 P long-term memory
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008302 P female germline ring canal formation, actin assembly
GO:0008335 P female germline ring canal stabilization
GO:0008355 P olfactory learning
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016319 P mushroom body development
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030036 P actin cytoskeleton organization
GO:0030046 P parallel actin filament bundle assembly
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030717 P oocyte karyosome formation
GO:0030723 P ovarian fusome organization
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0034332 P adherens junction organization
GO:0036058 P filtration diaphragm assembly
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0045172 C germline ring canal
GO:0045860 P positive regulation of protein kinase activity
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0048477 P oogenesis
GO:0090136 P epithelial cell-cell adhesion
9636 O_BomoASG18674_internal:A_BomoASG_c30288_g1_i1
169bp
 microtubule-associated_protein_futsch_[Bombyx_mori]
9637 O_BomoASG18675_internal:A_BomoASG_c30288_g1_i3
214bp
 microtubule-associated_protein_futsch_[Bombyx_mori]
9638 O_BomoASG18676_complete:A_BomoASG_c30289_g2_i3
419bp
 alpha-(1,3)-fucosyltransferase_C_[Bombyx_mori]
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006486 P protein glycosylation
GO:0008417 F fucosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0032580 C Golgi cisterna membrane
GO:0036065 P fucosylation
GO:0046920 F alpha-(1->3)-fucosyltransferase activity
9639 O_BomoASG18677_complete:A_BomoASG_c30290_g1_i1
278bp
 uncharacterized_protein_LOC110377073_[Helicoverpa_armigera]
9640 O_BomoASG18678_complete:A_BomoASG_c30290_g1_i1
118bp
9641 O_BomoASG18679_5prime_partial:A_BomoASG_c30290_g1_i2
207bp
 uncharacterized_protein_LOC110377073_[Helicoverpa_armigera]
9642 O_BomoASG1867_internal:A_BomoASG_c12095_g1_i1
124bp
 LOW_QUALITY_PROTEIN:_collagen_alpha-2(IV)_chain_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0030198 P extracellular matrix organization
GO:0046872 F metal ion binding
GO:0071300 P cellular response to retinoic acid
GO:0071310 P cellular response to organic substance
GO:0071873 P response to norepinephrine
GO:0097067 P cellular response to thyroid hormone stimulus
9643 O_BomoASG18680_5prime_partial:A_BomoASG_c30290_g1_i4
556bp
 PREDICTED:_uncharacterized_protein_LOC106140037_[Amyelois_transitella]
9644 O_BomoASG18681_complete:A_BomoASG_c30290_g1_i4
118bp
9645 O_BomoASG18682_3prime_partial:A_BomoASG_c30291_g1_i1
668bp
 hypothetical_protein_M514_23336_[Trichuris_suis]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
9646 O_BomoASG18683_5prime_partial:A_BomoASG_c30291_g1_i1
194bp
 PREDICTED:_uncharacterized_protein_LOC109038438_[Bemisia_tabaci]
9647 O_BomoASG18684_5prime_partial:A_BomoASG_c30291_g1_i2
194bp
 PREDICTED:_uncharacterized_protein_LOC109038438_[Bemisia_tabaci]
9648 O_BomoASG18685_internal:A_BomoASG_c30292_g1_i1
208bp
 prostaglandin_reductase_1-like_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006691 P leukotriene metabolic process
GO:0006693 P prostaglandin metabolic process
GO:0008270 F zinc ion binding
GO:0009636 P response to toxic substance
GO:0016491 F oxidoreductase activity
GO:0032440 F 2-alkenal reductase [NAD(P)+] activity
GO:0036132 F 13-prostaglandin reductase activity
GO:0047522 F 15-oxoprostaglandin 13-oxidase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
9649 O_BomoASG18686_internal:A_BomoASG_c30292_g2_i1
105bp
 prostaglandin_reductase_1-like_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006693 P prostaglandin metabolic process
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0032440 F 2-alkenal reductase [NAD(P)+] activity
GO:0036132 F 13-prostaglandin reductase activity
GO:0047522 F 15-oxoprostaglandin 13-oxidase activity
GO:0055114 P obsolete oxidation-reduction process
9650 O_BomoASG18687_internal:A_BomoASG_c30292_g2_i2
101bp
 prostaglandin_reductase_1-like_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006693 P prostaglandin metabolic process
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0032440 F 2-alkenal reductase [NAD(P)+] activity
GO:0036132 F 13-prostaglandin reductase activity
GO:0047522 F 15-oxoprostaglandin 13-oxidase activity
GO:0055114 P obsolete oxidation-reduction process
9651 O_BomoASG18688_3prime_partial:A_BomoASG_c30292_g2_i3
135bp
 prostaglandin_reductase_1-like_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006693 P prostaglandin metabolic process
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0032440 F 2-alkenal reductase [NAD(P)+] activity
GO:0036132 F 13-prostaglandin reductase activity
GO:0047522 F 15-oxoprostaglandin 13-oxidase activity
GO:0055114 P obsolete oxidation-reduction process
9652 O_BomoASG18689_5prime_partial:A_BomoASG_c30293_g1_i1
373bp
 tankyrase_[Bombyx_mori]
GO:0003950 F NAD+ ADP-ribosyltransferase activity
GO:0005515 F protein binding
GO:0006471 P protein ADP-ribosylation
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0022416 P chaeta development
GO:0035220 P wing disc development
GO:0046872 F metal ion binding
GO:0090364 P regulation of proteasome assembly
GO:0097110 F scaffold protein binding
9653 O_BomoASG1868_3prime_partial:A_BomoASG_c12096_g1_i1
145bp
 p23-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0007030 P Golgi organization
GO:0031965 C nuclear membrane
9654 O_BomoASG18690_complete:A_BomoASG_c30293_g1_i1
251bp
 unnamed_protein_product,_partial_[Tetraodon_nigroviridis]
9655 O_BomoASG18691_complete:A_BomoASG_c30293_g1_i1
110bp
9656 O_BomoASG18692_complete:A_BomoASG_c30294_g1_i1
972bp
 protein_SMG5_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031625 F ubiquitin protein ligase binding
GO:0032204 P regulation of telomere maintenance
GO:0032210 P regulation of telomere maintenance via telomerase
GO:0035303 P regulation of dephosphorylation
GO:0042162 F telomeric DNA binding
GO:0042826 F histone deacetylase binding
GO:0051721 F protein phosphatase 2A binding
GO:0070182 F DNA polymerase binding
9657 O_BomoASG18693_3prime_partial:A_BomoASG_c30295_g1_i1
105bp
 neuronal_membrane_glycoprotein_M6-b_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
9658 O_BomoASG18694_3prime_partial:A_BomoASG_c30296_g1_i1
505bp
 PX_domain-containing_protein_kinase-like_protein_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006954 P inflammatory response
GO:0008022 F protein C-terminus binding
GO:0016020 C membrane
GO:0032780 P negative regulation of ATP-dependent activity
GO:0035091 F phosphatidylinositol binding
GO:0042391 P regulation of membrane potential
GO:0043234 C protein-containing complex
GO:0043271 P negative regulation of ion transport
GO:0050804 P modulation of chemical synaptic transmission
9659 O_BomoASG18695_5prime_partial:A_BomoASG_c30296_g1_i1
129bp
9660 O_BomoASG18696_complete:A_BomoASG_c30297_g1_i1
251bp
 exosome_complex_component_RRP41_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0000460 P maturation of 5.8S rRNA
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003723 F RNA binding
GO:0004532 F exoribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006364 P rRNA processing
GO:0016075 P rRNA catabolic process
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0030307 P positive regulation of cell growth
GO:0031125 P rRNA 3'-end processing
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0035327 C euchromatin
GO:0043488 P regulation of mRNA stability
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0045006 P DNA deamination
GO:0051607 P defense response to virus
GO:0071028 P nuclear mRNA surveillance
GO:0071044 P histone mRNA catabolic process
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
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