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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8671 O_BomoASG17805_internal:A_BomoASG_c29981_g2_i3
433bp
 uncharacterized_protein_LOC105842278,_partial_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8672 O_BomoASG17806_internal:A_BomoASG_c29981_g1_i4
99bp
8673 O_BomoASG17807_complete:A_BomoASG_c29981_g1_i5
316bp
 thioredoxin_domain-containing_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045454 P cell redox homeostasis
8674 O_BomoASG17808_5prime_partial:A_BomoASG_c29981_g1_i5
144bp
8675 O_BomoASG17809_complete:A_BomoASG_c29981_g1_i6
244bp
 thioredoxin_domain-containing_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045454 P cell redox homeostasis
8676 O_BomoASG1780_internal:A_BomoASG_c11489_g1_i1
103bp
 transmembrane_protein_8A_[Bombyx_mori]
8677 O_BomoASG17810_5prime_partial:A_BomoASG_c29981_g1_i6
144bp
8678 O_BomoASG17811_5prime_partial:A_BomoASG_c29981_g1_i6
132bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8679 O_BomoASG17812_complete:A_BomoASG_c29981_g1_i7
208bp
 thioredoxin_domain-containing_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045454 P cell redox homeostasis
8680 O_BomoASG17813_complete:A_BomoASG_c29982_g1_i1
256bp
 uncharacterized_protein_LOC105841233_[Bombyx_mori]
8681 O_BomoASG17814_complete:A_BomoASG_c29982_g1_i1
156bp
8682 O_BomoASG17815_5prime_partial:A_BomoASG_c29982_g1_i2
480bp
 vacuolar-sorting_protein_SNF7-like_[Bombyx_mori]
GO:0000815 C ESCRT III complex
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0007034 P vacuolar transport
GO:0008565 F obsolete protein transporter activity
GO:0010458 P exit from mitosis
GO:0015031 P protein transport
GO:0031468 P nuclear membrane reassembly
GO:0045324 P late endosome to vacuole transport
8683 O_BomoASG17816_complete:A_BomoASG_c29982_g1_i2
156bp
8684 O_BomoASG17817_complete:A_BomoASG_c29982_g1_i3
611bp
 charged_multivesicular_body_protein_7_[Bombyx_mori]
GO:0000815 C ESCRT III complex
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0007034 P vacuolar transport
GO:0008565 F obsolete protein transporter activity
GO:0010458 P exit from mitosis
GO:0015031 P protein transport
GO:0031468 P nuclear membrane reassembly
GO:0045324 P late endosome to vacuole transport
8685 O_BomoASG17818_complete:A_BomoASG_c29982_g1_i3
156bp
8686 O_BomoASG17819_5prime_partial:A_BomoASG_c29983_g1_i1
274bp
 bromodomain_adjacent_to_zinc_finger_domain_protein_1A_[Bombyx_mori]
GO:0000124 C SAGA complex
GO:0000775 C chromosome, centromeric region
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005829 C cytosol
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008080 F N-acetyltransferase activity
GO:0010484 F H3 histone acetyltransferase activity
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0043966 P histone H3 acetylation
GO:0046695 C SLIK (SAGA-like) complex
GO:0070577 F lysine-acetylated histone binding
8687 O_BomoASG1781_internal:A_BomoASG_c11494_g1_i1
114bp
8688 O_BomoASG17820_5prime_partial:A_BomoASG_c29983_g1_i2
215bp
 bromodomain_adjacent_to_zinc_finger_domain_protein_1A_[Bombyx_mori]
GO:0000124 C SAGA complex
GO:0000775 C chromosome, centromeric region
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005829 C cytosol
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008080 F N-acetyltransferase activity
GO:0010484 F H3 histone acetyltransferase activity
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0043966 P histone H3 acetylation
GO:0046695 C SLIK (SAGA-like) complex
GO:0070577 F lysine-acetylated histone binding
8689 O_BomoASG17821_complete:A_BomoASG_c29985_g1_i1
521bp
 transcription_termination_factor_5,_mitochondrial-like_[Bombyx_mori]
8690 O_BomoASG17822_3prime_partial:A_BomoASG_c29986_g1_i1
153bp
 hypothetical_protein_RP20_CCG023638_[Aedes_albopictus]
8691 O_BomoASG17823_5prime_partial:A_BomoASG_c29987_g1_i1
422bp
 isovaleryl_coenzyme_A_dehydrogenase_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006551 P leucine metabolic process
GO:0006552 P leucine catabolic process
GO:0008152 P metabolic process
GO:0008470 F isovaleryl-CoA dehydrogenase activity
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0031966 C mitochondrial membrane
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0050660 F flavin adenine dinucleotide binding
GO:0051260 P protein homooligomerization
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
8692 O_BomoASG17824_complete:A_BomoASG_c29987_g1_i1
139bp
8693 O_BomoASG17825_internal:A_BomoASG_c29988_g1_i1
435bp
 tyrosine-protein_kinase_PR2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030154 P cell differentiation
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
8694 O_BomoASG17826_complete:A_BomoASG_c29988_g1_i1
145bp
8695 O_BomoASG17827_complete:A_BomoASG_c29988_g1_i1
117bp
8696 O_BomoASG17828_internal:A_BomoASG_c29988_g1_i2
790bp
 tyrosine-protein_kinase_PR2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030154 P cell differentiation
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
8697 O_BomoASG17829_complete:A_BomoASG_c29988_g1_i2
145bp
8698 O_BomoASG1782_internal:A_BomoASG_c11494_g1_i1
114bp
 uncharacterized_protein_LOC110379201_[Helicoverpa_armigera]
8699 O_BomoASG17830_complete:A_BomoASG_c29988_g1_i2
117bp
8700 O_BomoASG17831_complete:A_BomoASG_c29989_g3_i1
187bp
 tropomyosin-2_isoform_3_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005862 C muscle thin filament tropomyosin
GO:0006936 P muscle contraction
GO:0007315 P pole plasm assembly
GO:0010591 P regulation of lamellipodium assembly
GO:0016529 C sarcoplasmic reticulum
GO:0030017 C sarcomere
GO:0031941 C filamentous actin
GO:0045451 P pole plasm oskar mRNA localization
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0051015 F actin filament binding
GO:0070865 C investment cone
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