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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8641 O_BomoASG17779_5prime_partial:A_BomoASG_c29976_g1_i2
121bp
8642 O_BomoASG1777_internal:A_BomoASG_c11483_g1_i1
213bp
 DNA-directed_RNA_polymerase_II_subunit_RPB1_[Bombyx_mori]
8643 O_BomoASG17780_complete:A_BomoASG_c29977_g1_i1
418bp
 importin_subunit_alpha-5_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
8644 O_BomoASG17781_complete:A_BomoASG_c29977_g1_i1
122bp
8645 O_BomoASG17782_complete:A_BomoASG_c29977_g1_i2
505bp
 importin_subunit_alpha-5_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
8646 O_BomoASG17783_complete:A_BomoASG_c29977_g1_i2
122bp
8647 O_BomoASG17784_5prime_partial:A_BomoASG_c29977_g1_i3
201bp
 importin_subunit_alpha-5_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006606 P protein import into nucleus
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0008139 F nuclear localization sequence binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0042826 F histone deacetylase binding
GO:0044822 F RNA binding
8648 O_BomoASG17785_3prime_partial:A_BomoASG_c29977_g1_i3
122bp
8649 O_BomoASG17786_internal:A_BomoASG_c29979_g1_i1
175bp
 piggyBac_transposable_element-derived_protein_4_isoform_X1_[Bombyx_mori]
8650 O_BomoASG17787_complete:A_BomoASG_c29979_g1_i1
142bp
8651 O_BomoASG17788_5prime_partial:A_BomoASG_c29979_g1_i1
132bp
8652 O_BomoASG17789_5prime_partial:A_BomoASG_c29979_g2_i1
114bp
 piggyBac_transposable_element-derived_protein_4_isoform_X4_[Bombyx_mori]
8653 O_BomoASG1778_internal:A_BomoASG_c11483_g1_i2
197bp
 DNA-directed_RNA_polymerase_II_subunit_RPB1_[Bombyx_mori]
8654 O_BomoASG17790_5prime_partial:A_BomoASG_c29979_g2_i2
400bp
 piggyBac_transposable_element-derived_protein_4_isoform_X4_[Bombyx_mori]
8655 O_BomoASG17791_5prime_partial:A_BomoASG_c29979_g2_i3
140bp
 piggyBac_transposable_element-derived_protein_4_isoform_X4_[Bombyx_mori]
8656 O_BomoASG17792_3prime_partial:A_BomoASG_c29980_g1_i1
417bp
 protein_CLP1_homolog_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
8657 O_BomoASG17793_5prime_partial:A_BomoASG_c29980_g1_i1
111bp
8658 O_BomoASG17794_complete:A_BomoASG_c29981_g1_i1
316bp
 thioredoxin_domain-containing_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045454 P cell redox homeostasis
8659 O_BomoASG17795_5prime_partial:A_BomoASG_c29981_g1_i1
158bp
 RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Papilio_machaon]
8660 O_BomoASG17796_5prime_partial:A_BomoASG_c29981_g1_i1
144bp
8661 O_BomoASG17797_3prime_partial:A_BomoASG_c29981_g1_i1
103bp
8662 O_BomoASG17798_internal:A_BomoASG_c29981_g2_i1
290bp
 uncharacterized_protein_LOC105842278,_partial_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8663 O_BomoASG17799_complete:A_BomoASG_c29981_g1_i2
316bp
 thioredoxin_domain-containing_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045454 P cell redox homeostasis
8664 O_BomoASG1779_internal:A_BomoASG_c11488_g1_i1
102bp
8665 O_BomoASG177_internal:A_BomoASG_c1394_g1_i1
99bp
8666 O_BomoASG17800_5prime_partial:A_BomoASG_c29981_g1_i2
144bp
8667 O_BomoASG17801_internal:A_BomoASG_c29981_g2_i2
105bp
 uncharacterized_protein_LOC105842278,_partial_[Bombyx_mori]
8668 O_BomoASG17802_5prime_partial:A_BomoASG_c29981_g1_i3
441bp
 thioredoxin_domain-containing_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045454 P cell redox homeostasis
8669 O_BomoASG17803_5prime_partial:A_BomoASG_c29981_g1_i3
144bp
8670 O_BomoASG17804_complete:A_BomoASG_c29981_g1_i3
131bp
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