SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/32479
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8281 O_BomoASG17454_5prime_partial:A_BomoASG_c29858_g1_i2
402bp
 piggyBac_transposable_element-derived_protein_4-like_isoform_X4_[Bombyx_mori]
8282 O_BomoASG17455_5prime_partial:A_BomoASG_c29859_g2_i1
100bp
 PREDICTED:_uncharacterized_protein_LOC106717627_[Papilio_machaon]
8283 O_BomoASG17456_5prime_partial:A_BomoASG_c29859_g2_i2
100bp
 PREDICTED:_uncharacterized_protein_LOC106717627_[Papilio_machaon]
8284 O_BomoASG17457_complete:A_BomoASG_c29860_g1_i1
209bp
 uncharacterized_protein_LOC101746869_[Bombyx_mori]
GO:0005515 F protein binding
8285 O_BomoASG17458_internal:A_BomoASG_c29861_g1_i1
114bp
 PREDICTED:_uncharacterized_protein_LOC107883710_[Acyrthosiphon_pisum]
8286 O_BomoASG17459_complete:A_BomoASG_c29862_g1_i1
336bp
 piggyBac_transposable_element-derived_protein_3-like,_partial_[Bombyx_mori]
8287 O_BomoASG1745_3prime_partial:A_BomoASG_c11234_g1_i1
114bp
 UDP-glucuronosyltransferase_2B14-like_precursor_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
8288 O_BomoASG17460_3prime_partial:A_BomoASG_c29862_g1_i1
137bp
 PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Amyelois_transitella]
8289 O_BomoASG17461_3prime_partial:A_BomoASG_c29862_g1_i2
137bp
 PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Amyelois_transitella]
8290 O_BomoASG17462_complete:A_BomoASG_c29863_g1_i1
317bp
 uncharacterized_protein_LOC101742817_[Bombyx_mori]
8291 O_BomoASG17463_complete:A_BomoASG_c29863_g1_i2
317bp
 uncharacterized_protein_LOC101742817_[Bombyx_mori]
8292 O_BomoASG17464_complete:A_BomoASG_c29866_g1_i1
409bp
 STAM-binding_protein-like_A_[Bombyx_mori]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
8293 O_BomoASG17465_3prime_partial:A_BomoASG_c29867_g1_i1
310bp
 GTP-binding_protein_128up_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
8294 O_BomoASG17466_complete:A_BomoASG_c29867_g1_i1
152bp
 hypothetical_protein_HERIO_2169_[Hepatospora_eriocheir]
8295 O_BomoASG17467_3prime_partial:A_BomoASG_c29867_g1_i2
310bp
 GTP-binding_protein_128up_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
8296 O_BomoASG17468_complete:A_BomoASG_c29867_g1_i2
152bp
 hypothetical_protein_HERIO_2169_[Hepatospora_eriocheir]
8297 O_BomoASG17469_3prime_partial:A_BomoASG_c29867_g1_i3
296bp
 PREDICTED:_GTP-binding_protein_128up_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
8298 O_BomoASG1746_5prime_partial:A_BomoASG_c11238_g1_i1
108bp
 sperm_mitochondrial-associated_cysteine-rich_protein-like_[Bombyx_mori]
8299 O_BomoASG17470_complete:A_BomoASG_c29867_g1_i3
152bp
 hypothetical_protein_HERIO_2169_[Hepatospora_eriocheir]
8300 O_BomoASG17471_complete:A_BomoASG_c29870_g1_i1
200bp
 polycomb_protein_suz12-B_isoform_X2_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005704 C polytene chromosome band
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0008283 P cell population proliferation
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0035097 C histone methyltransferase complex
GO:0035098 C ESC/E(Z) complex
GO:0042054 F histone methyltransferase activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070734 P histone H3-K27 methylation
GO:2001229 P negative regulation of response to gamma radiation
8301 O_BomoASG17472_5prime_partial:A_BomoASG_c29870_g1_i2
265bp
 polycomb_protein_suz12-B_isoform_X2_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005704 C polytene chromosome band
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0008283 P cell population proliferation
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0035097 C histone methyltransferase complex
GO:0035098 C ESC/E(Z) complex
GO:0042054 F histone methyltransferase activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070734 P histone H3-K27 methylation
GO:2001229 P negative regulation of response to gamma radiation
8302 O_BomoASG17473_complete:A_BomoASG_c29870_g1_i4
117bp
 polycomb_protein_suz12-B_isoform_X2_[Bombyx_mori]
8303 O_BomoASG17474_5prime_partial:A_BomoASG_c29872_g1_i1
672bp
 SCY1-like_protein_2_[Bombyx_mori]
GO:0002092 P positive regulation of receptor internalization
GO:0004672 F protein kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0048471 C perinuclear region of cytoplasm
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000286 P receptor internalization involved in canonical Wnt signaling pathway
GO:2000370 P positive regulation of clathrin-dependent endocytosis
8304 O_BomoASG17475_complete:A_BomoASG_c29872_g1_i1
102bp
8305 O_BomoASG17476_complete:A_BomoASG_c29872_g1_i1
102bp
8306 O_BomoASG17477_5prime_partial:A_BomoASG_c29873_g1_i1
205bp
 ATP-binding_cassette_sub-family_G_member_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005543 F phospholipid binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009720 P detection of hormone stimulus
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010887 P negative regulation of cholesterol storage
GO:0010888 P negative regulation of lipid storage
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042157 P lipoprotein metabolic process
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055037 C recycling endosome
GO:0055085 P transmembrane transport
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
8307 O_BomoASG17478_internal:A_BomoASG_c29873_g1_i2
348bp
 ATP-binding_cassette_sub-family_G_member_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005543 F phospholipid binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009720 P detection of hormone stimulus
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010887 P negative regulation of cholesterol storage
GO:0010888 P negative regulation of lipid storage
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042157 P lipoprotein metabolic process
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055037 C recycling endosome
GO:0055085 P transmembrane transport
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
8308 O_BomoASG17479_internal:A_BomoASG_c29873_g2_i1
211bp
 ATP-binding_cassette_sub-family_G_member_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005543 F phospholipid binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009720 P detection of hormone stimulus
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010887 P negative regulation of cholesterol storage
GO:0010888 P negative regulation of lipid storage
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042157 P lipoprotein metabolic process
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055037 C recycling endosome
GO:0055085 P transmembrane transport
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
8309 O_BomoASG1747_5prime_partial:A_BomoASG_c11257_g1_i1
136bp
 E3_ubiquitin-protein_ligase_AIP2-like_[Bombyx_mori]
8310 O_BomoASG17480_complete:A_BomoASG_c29873_g2_i1
120bp
 hypothetical_protein_PITG_04292_[Phytophthora_infestans_T30-4]
previous next from show/32479

- SilkBase 1999-2023 -