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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8251 O_BomoASG17427_5prime_partial:A_BomoASG_c29853_g1_i1
605bp
 ecotropic_viral_integration_site_5_ortholog_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006886 P intracellular protein transport
GO:0007298 P border follicle cell migration
GO:0017137 F small GTPase binding
GO:0030334 P regulation of cell migration
GO:0031338 P regulation of vesicle fusion
GO:0031982 C vesicle
GO:0032880 P regulation of protein localization
GO:0043087 P regulation of GTPase activity
GO:0055037 C recycling endosome
GO:0090630 P activation of GTPase activity
8252 O_BomoASG17428_complete:A_BomoASG_c29853_g1_i1
111bp
8253 O_BomoASG17429_5prime_partial:A_BomoASG_c29853_g1_i2
653bp
 ecotropic_viral_integration_site_5_ortholog_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006886 P intracellular protein transport
GO:0007298 P border follicle cell migration
GO:0017137 F small GTPase binding
GO:0030334 P regulation of cell migration
GO:0031338 P regulation of vesicle fusion
GO:0031982 C vesicle
GO:0032880 P regulation of protein localization
GO:0043087 P regulation of GTPase activity
GO:0055037 C recycling endosome
GO:0090630 P activation of GTPase activity
8254 O_BomoASG1742_internal:A_BomoASG_c11199_g1_i1
118bp
 zinc_finger_protein_271_isoform_X2_[Bombyx_mori]
8255 O_BomoASG17430_complete:A_BomoASG_c29853_g1_i2
111bp
8256 O_BomoASG17431_5prime_partial:A_BomoASG_c29853_g1_i4
649bp
 ecotropic_viral_integration_site_5_ortholog_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006886 P intracellular protein transport
GO:0007298 P border follicle cell migration
GO:0017137 F small GTPase binding
GO:0030334 P regulation of cell migration
GO:0031338 P regulation of vesicle fusion
GO:0031982 C vesicle
GO:0032880 P regulation of protein localization
GO:0043087 P regulation of GTPase activity
GO:0055037 C recycling endosome
GO:0090630 P activation of GTPase activity
8257 O_BomoASG17432_complete:A_BomoASG_c29853_g1_i4
111bp
8258 O_BomoASG17433_5prime_partial:A_BomoASG_c29853_g1_i5
138bp
 ecotropic_viral_integration_site_5_ortholog_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006886 P intracellular protein transport
GO:0007298 P border follicle cell migration
GO:0017137 F small GTPase binding
GO:0030334 P regulation of cell migration
GO:0031338 P regulation of vesicle fusion
GO:0031982 C vesicle
GO:0032880 P regulation of protein localization
GO:0043087 P regulation of GTPase activity
GO:0055037 C recycling endosome
GO:0090630 P activation of GTPase activity
8259 O_BomoASG17434_internal:A_BomoASG_c29854_g1_i1
162bp
 amyloid_protein-binding_protein_2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0046907 P intracellular transport
8260 O_BomoASG17435_5prime_partial:A_BomoASG_c29854_g1_i1
136bp
8261 O_BomoASG17436_5prime_partial:A_BomoASG_c29854_g1_i2
208bp
 amyloid_protein-binding_protein_2_[Bombyx_mori]
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0046907 P intracellular transport
8262 O_BomoASG17437_5prime_partial:A_BomoASG_c29854_g1_i3
231bp
 amyloid_protein-binding_protein_2_[Bombyx_mori]
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0046907 P intracellular transport
8263 O_BomoASG17438_5prime_partial:A_BomoASG_c29854_g1_i4
232bp
 amyloid_protein-binding_protein_2_[Bombyx_mori]
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0046907 P intracellular transport
8264 O_BomoASG17439_5prime_partial:A_BomoASG_c29854_g1_i5
311bp
 amyloid_protein-binding_protein_2_[Bombyx_mori]
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0046907 P intracellular transport
8265 O_BomoASG1743_internal:A_BomoASG_c11218_g1_i1
147bp
 rapamycin-insensitive_companion_of_mTOR_[Bombyx_mori]
8266 O_BomoASG17440_3prime_partial:A_BomoASG_c29855_g1_i1
355bp
 uncharacterized_protein_LOC105842280_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0019903 F protein phosphatase binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043666 P regulation of phosphoprotein phosphatase activity
8267 O_BomoASG17441_5prime_partial:A_BomoASG_c29855_g1_i1
107bp
8268 O_BomoASG17442_internal:A_BomoASG_c29856_g1_i1
290bp
 dystrophin,_isoforms_A/C/F/G/H,_partial_[Bombyx_mori]
8269 O_BomoASG17443_5prime_partial:A_BomoASG_c29856_g1_i1
215bp
8270 O_BomoASG17444_5prime_partial:A_BomoASG_c29856_g1_i1
205bp
8271 O_BomoASG17445_5prime_partial:A_BomoASG_c29856_g1_i1
179bp
8272 O_BomoASG17446_internal:A_BomoASG_c29856_g1_i2
278bp
 dystrophin,_isoforms_A/C/F/G/H,_partial_[Bombyx_mori]
8273 O_BomoASG17447_5prime_partial:A_BomoASG_c29856_g1_i2
215bp
8274 O_BomoASG17448_5prime_partial:A_BomoASG_c29856_g1_i2
205bp
8275 O_BomoASG17449_5prime_partial:A_BomoASG_c29856_g1_i2
179bp
8276 O_BomoASG1744_5prime_partial:A_BomoASG_c11218_g1_i1
104bp
8277 O_BomoASG17450_5prime_partial:A_BomoASG_c29857_g1_i1
280bp
 FAST_kinase_domain-containing_protein_5,_mitochondrial_[Bombyx_mori]
GO:0000963 P mitochondrial RNA processing
GO:0003723 F RNA binding
GO:0004672 F protein kinase activity
GO:0005739 C mitochondrion
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0019843 F rRNA binding
GO:0035770 C ribonucleoprotein granule
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:0045333 P cellular respiration
8278 O_BomoASG17451_5prime_partial:A_BomoASG_c29857_g1_i3
308bp
 FAST_kinase_domain-containing_protein_5,_mitochondrial_[Bombyx_mori]
GO:0000963 P mitochondrial RNA processing
GO:0003723 F RNA binding
GO:0004672 F protein kinase activity
GO:0005739 C mitochondrion
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0019843 F rRNA binding
GO:0035770 C ribonucleoprotein granule
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:0045333 P cellular respiration
8279 O_BomoASG17452_5prime_partial:A_BomoASG_c29858_g1_i1
213bp
 piggyBac_transposable_element-derived_protein_4-like_isoform_X5_[Bombyx_mori]
8280 O_BomoASG17453_complete:A_BomoASG_c29858_g1_i1
187bp
 piggyBac_transposable_element-derived_protein_4-like_isoform_X3_[Bombyx_mori]
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