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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8131 O_BomoASG17319_3prime_partial:A_BomoASG_c29811_g1_i2
367bp
 putative_mediator_of_RNA_polymerase_II_transcription_subunit_26_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0016925 P protein sumoylation
GO:0016926 P protein desumoylation
GO:0016929 F SUMO-specific protease activity
GO:0070646 P protein modification by small protein removal
GO:0090169 P regulation of spindle assembly
GO:0090234 P regulation of kinetochore assembly
8132 O_BomoASG1731_complete:A_BomoASG_c11041_g1_i2
438bp
 YAP65-like_protein_[Bombyx_mori]
GO:0003406 P retinal pigment epithelium development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007420 P brain development
GO:0007492 P endoderm development
GO:0009950 P dorsal/ventral axis specification
GO:0010629 P negative regulation of gene expression
GO:0031016 P pancreas development
GO:0035162 P embryonic hemopoiesis
GO:0039022 P pronephric duct development
GO:0042384 P cilium assembly
GO:0043066 P negative regulation of apoptotic process
GO:0048916 P posterior lateral line development
GO:0051216 P cartilage development
GO:0060914 P heart formation
8133 O_BomoASG17320_complete:A_BomoASG_c29811_g1_i2
119bp
8134 O_BomoASG17321_complete:A_BomoASG_c29811_g1_i2
102bp
8135 O_BomoASG17322_5prime_partial:A_BomoASG_c29811_g1_i3
832bp
 putative_mediator_of_RNA_polymerase_II_transcription_subunit_26_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0016925 P protein sumoylation
GO:0016926 P protein desumoylation
GO:0016929 F SUMO-specific protease activity
GO:0070646 P protein modification by small protein removal
GO:0090169 P regulation of spindle assembly
GO:0090234 P regulation of kinetochore assembly
8136 O_BomoASG17323_3prime_partial:A_BomoASG_c29811_g1_i3
367bp
 putative_mediator_of_RNA_polymerase_II_transcription_subunit_26_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0016925 P protein sumoylation
GO:0016926 P protein desumoylation
GO:0016929 F SUMO-specific protease activity
GO:0070646 P protein modification by small protein removal
GO:0090169 P regulation of spindle assembly
GO:0090234 P regulation of kinetochore assembly
8137 O_BomoASG17324_complete:A_BomoASG_c29811_g1_i3
119bp
8138 O_BomoASG17325_complete:A_BomoASG_c29811_g1_i3
102bp
8139 O_BomoASG17326_3prime_partial:A_BomoASG_c29811_g1_i4
367bp
 putative_mediator_of_RNA_polymerase_II_transcription_subunit_26_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0016925 P protein sumoylation
GO:0016926 P protein desumoylation
GO:0016929 F SUMO-specific protease activity
GO:0070646 P protein modification by small protein removal
GO:0090169 P regulation of spindle assembly
GO:0090234 P regulation of kinetochore assembly
8140 O_BomoASG17327_complete:A_BomoASG_c29811_g1_i4
258bp
 putative_mediator_of_RNA_polymerase_II_transcription_subunit_26_isoform_X4_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0016925 P protein sumoylation
GO:0016926 P protein desumoylation
GO:0016929 F SUMO-specific protease activity
GO:0070646 P protein modification by small protein removal
GO:0090169 P regulation of spindle assembly
GO:0090234 P regulation of kinetochore assembly
8141 O_BomoASG17328_complete:A_BomoASG_c29811_g1_i4
119bp
8142 O_BomoASG17329_5prime_partial:A_BomoASG_c29812_g1_i1
511bp
 dedicator_of_cytokinesis_protein_9_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005622 C intracellular anatomical structure
GO:0007264 P small GTPase mediated signal transduction
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0017048 F small GTPase binding
GO:0043547 P positive regulation of GTPase activity
8143 O_BomoASG1732_3prime_partial:A_BomoASG_c11106_g1_i1
100bp
 ribosomal_protein_P1_[Bombyx_mori]
GO:0002181 P cytoplasmic translation
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006414 P translational elongation
GO:0022625 C cytosolic large ribosomal subunit
GO:0030295 F protein kinase activator activity
GO:0030529 C ribonucleoprotein complex
GO:0030687 C preribosome, large subunit precursor
GO:0032147 P activation of protein kinase activity
GO:0045860 P positive regulation of protein kinase activity
GO:0070180 F large ribosomal subunit rRNA binding
8144 O_BomoASG17330_3prime_partial:A_BomoASG_c29813_g1_i5
200bp
 Myotubularin-related_protein_5_[Papilio_xuthus]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005774 C vacuolar membrane
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0019208 F phosphatase regulator activity
GO:0019902 F phosphatase binding
GO:0035091 F phosphatidylinositol binding
GO:0042552 P myelination
GO:0042803 F protein homodimerization activity
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0051262 P protein tetramerization
8145 O_BomoASG17331_complete:A_BomoASG_c29813_g1_i5
116bp
8146 O_BomoASG17332_complete:A_BomoASG_c29814_g1_i1
252bp
 dolichyldiphosphatase_1-like_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0047874 F dolichyldiphosphatase activity
8147 O_BomoASG17333_complete:A_BomoASG_c29814_g1_i2
252bp
 dolichyldiphosphatase_1-like_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0047874 F dolichyldiphosphatase activity
8148 O_BomoASG17334_internal:A_BomoASG_c29815_g1_i1
1656bp
 LOW_QUALITY_PROTEIN:_histone-lysine_N-methyltransferase_2C_[Bombyx_mori]
GO:0003713 F transcription coactivator activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0035075 P response to ecdysone
GO:0035332 P positive regulation of hippo signaling
GO:0042054 F histone methyltransferase activity
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044666 C MLL3/4 complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048749 P compound eye development
GO:0051568 P histone H3-K4 methylation
GO:1900114 P positive regulation of histone H3-K9 trimethylation
8149 O_BomoASG17335_3prime_partial:A_BomoASG_c29816_g1_i1
357bp
 phosphatidylinositol_4-phosphate_3-kinase_C2_domain-containing_subunit_alpha_isoform_X1_[Bombyx_mori]
8150 O_BomoASG17336_3prime_partial:A_BomoASG_c29816_g2_i1
120bp
 phosphatidylinositol_4-phosphate_3-kinase_C2_domain-containing_subunit_alpha_isoform_X2_[Bombyx_mori]
8151 O_BomoASG17337_internal:A_BomoASG_c29816_g2_i1
120bp
8152 O_BomoASG17338_5prime_partial:A_BomoASG_c29817_g1_i1
196bp
 carbohydrate-responsive_element-binding_protein_isoform_X5_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008284 P positive regulation of cell population proliferation
GO:0009653 P anatomical structure morphogenesis
GO:0010255 P glucose mediated signaling pathway
GO:0033137 P negative regulation of peptidyl-serine phosphorylation
GO:0035538 F carbohydrate response element binding
GO:0035556 P intracellular signal transduction
GO:0042593 P glucose homeostasis
GO:0042803 F protein homodimerization activity
GO:0045723 P positive regulation of fatty acid biosynthetic process
GO:0045821 P positive regulation of glycolytic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055089 P fatty acid homeostasis
GO:0070328 P triglyceride homeostasis
GO:0071157 P regulation of cell cycle
GO:0071322 P cellular response to carbohydrate stimulus
GO:0090324 P negative regulation of oxidative phosphorylation
GO:2000505 P energy homeostasis
8153 O_BomoASG17339_5prime_partial:A_BomoASG_c29817_g1_i2
609bp
 carbohydrate-responsive_element-binding_protein_isoform_X4_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008284 P positive regulation of cell population proliferation
GO:0009653 P anatomical structure morphogenesis
GO:0010255 P glucose mediated signaling pathway
GO:0033137 P negative regulation of peptidyl-serine phosphorylation
GO:0035538 F carbohydrate response element binding
GO:0035556 P intracellular signal transduction
GO:0042593 P glucose homeostasis
GO:0042803 F protein homodimerization activity
GO:0045723 P positive regulation of fatty acid biosynthetic process
GO:0045821 P positive regulation of glycolytic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055089 P fatty acid homeostasis
GO:0070328 P triglyceride homeostasis
GO:0071157 P regulation of cell cycle
GO:0071322 P cellular response to carbohydrate stimulus
GO:0090324 P negative regulation of oxidative phosphorylation
GO:2000505 P energy homeostasis
8154 O_BomoASG1733_internal:A_BomoASG_c11110_g1_i1
223bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8155 O_BomoASG17340_complete:A_BomoASG_c29817_g1_i2
157bp
8156 O_BomoASG17341_complete:A_BomoASG_c29817_g1_i2
143bp
8157 O_BomoASG17342_5prime_partial:A_BomoASG_c29817_g1_i3
615bp
 carbohydrate-responsive_element-binding_protein_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008284 P positive regulation of cell population proliferation
GO:0009653 P anatomical structure morphogenesis
GO:0010255 P glucose mediated signaling pathway
GO:0033137 P negative regulation of peptidyl-serine phosphorylation
GO:0035538 F carbohydrate response element binding
GO:0035556 P intracellular signal transduction
GO:0042593 P glucose homeostasis
GO:0042803 F protein homodimerization activity
GO:0045723 P positive regulation of fatty acid biosynthetic process
GO:0045821 P positive regulation of glycolytic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055089 P fatty acid homeostasis
GO:0070328 P triglyceride homeostasis
GO:0071157 P regulation of cell cycle
GO:0071322 P cellular response to carbohydrate stimulus
GO:0090324 P negative regulation of oxidative phosphorylation
GO:2000505 P energy homeostasis
8158 O_BomoASG17343_complete:A_BomoASG_c29817_g1_i3
157bp
8159 O_BomoASG17344_complete:A_BomoASG_c29817_g1_i3
143bp
8160 O_BomoASG17345_5prime_partial:A_BomoASG_c29818_g1_i1
421bp
 Gag_protein_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
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