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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8041 O_BomoASG17238_5prime_partial:A_BomoASG_c29768_g1_i2
133bp
 MIP18_family_protein_CG7949_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007059 P chromosome segregation
GO:0008150 P biological_process
GO:0016226 P iron-sulfur cluster assembly
8042 O_BomoASG17239_3prime_partial:A_BomoASG_c29772_g1_i1
294bp
 WD_repeat-containing_protein_13_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:1904691 P negative regulation of type B pancreatic cell proliferation
GO:1990841 F promoter-specific chromatin binding
8043 O_BomoASG1723_3prime_partial:A_BomoASG_c11002_g1_i1
175bp
 uncharacterized_protein_LOC101742167_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
8044 O_BomoASG17240_5prime_partial:A_BomoASG_c29772_g1_i1
154bp
8045 O_BomoASG17241_complete:A_BomoASG_c29772_g1_i1
145bp
8046 O_BomoASG17242_5prime_partial:A_BomoASG_c29773_g1_i1
362bp
 uncharacterized_protein_LOC101745225_[Bombyx_mori]
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016247 F channel regulator activity
GO:0019226 P transmission of nerve impulse
GO:0030054 C cell junction
GO:0032281 C AMPA glutamate receptor complex
GO:0034765 P regulation of ion transmembrane transport
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0070588 P calcium ion transmembrane transport
GO:2000311 P regulation of AMPA receptor activity
8047 O_BomoASG17243_complete:A_BomoASG_c29773_g1_i2
328bp
 uncharacterized_protein_LOC101745225_[Bombyx_mori]
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016247 F channel regulator activity
GO:0019226 P transmission of nerve impulse
GO:0030054 C cell junction
GO:0032281 C AMPA glutamate receptor complex
GO:0034765 P regulation of ion transmembrane transport
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0070588 P calcium ion transmembrane transport
GO:2000311 P regulation of AMPA receptor activity
8048 O_BomoASG17244_3prime_partial:A_BomoASG_c29774_g1_i2
129bp
 copia_protein_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8049 O_BomoASG17245_3prime_partial:A_BomoASG_c29774_g1_i6
129bp
 copia_protein_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8050 O_BomoASG17246_3prime_partial:A_BomoASG_c29774_g1_i8
129bp
 copia_protein_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8051 O_BomoASG17247_3prime_partial:A_BomoASG_c29775_g1_i1
340bp
 uncharacterized_protein_LOC101742038_[Bombyx_mori]
8052 O_BomoASG17248_complete:A_BomoASG_c29775_g1_i1
107bp
8053 O_BomoASG17249_5prime_partial:A_BomoASG_c29776_g1_i2
485bp
 uncharacterized_protein_LOC101746239_isoform_X1_[Bombyx_mori]
8054 O_BomoASG1724_internal:A_BomoASG_c11008_g1_i1
122bp
8055 O_BomoASG17250_internal:A_BomoASG_c29779_g1_i1
117bp
 zinc_finger_protein_629_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0007423 P sensory organ development
GO:0007601 P visual perception
GO:0008407 P chaeta morphogenesis
GO:0008594 P photoreceptor cell morphogenesis
GO:0016360 P sensory organ precursor cell fate determination
GO:0042051 P compound eye photoreceptor development
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0043066 P negative regulation of apoptotic process
GO:0043425 F bHLH transcription factor binding
GO:0043565 F sequence-specific DNA binding
GO:0045464 P R8 cell fate specification
GO:0045465 P R8 cell differentiation
GO:0045872 P obsolete positive regulation of rhodopsin gene expression
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046530 P photoreceptor cell differentiation
GO:0046872 F metal ion binding
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0050896 P response to stimulus
8056 O_BomoASG17251_internal:A_BomoASG_c29779_g1_i2
311bp
 zinc_finger_protein_629_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0007423 P sensory organ development
GO:0007601 P visual perception
GO:0008407 P chaeta morphogenesis
GO:0008594 P photoreceptor cell morphogenesis
GO:0016360 P sensory organ precursor cell fate determination
GO:0042051 P compound eye photoreceptor development
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0043066 P negative regulation of apoptotic process
GO:0043425 F bHLH transcription factor binding
GO:0043565 F sequence-specific DNA binding
GO:0045464 P R8 cell fate specification
GO:0045465 P R8 cell differentiation
GO:0045872 P obsolete positive regulation of rhodopsin gene expression
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046530 P photoreceptor cell differentiation
GO:0046872 F metal ion binding
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0050896 P response to stimulus
8057 O_BomoASG17252_internal:A_BomoASG_c29779_g1_i3
348bp
 zinc_finger_protein_629_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0007423 P sensory organ development
GO:0007601 P visual perception
GO:0008407 P chaeta morphogenesis
GO:0008594 P photoreceptor cell morphogenesis
GO:0016360 P sensory organ precursor cell fate determination
GO:0042051 P compound eye photoreceptor development
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0043066 P negative regulation of apoptotic process
GO:0043425 F bHLH transcription factor binding
GO:0043565 F sequence-specific DNA binding
GO:0045464 P R8 cell fate specification
GO:0045465 P R8 cell differentiation
GO:0045872 P obsolete positive regulation of rhodopsin gene expression
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046530 P photoreceptor cell differentiation
GO:0046872 F metal ion binding
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0050896 P response to stimulus
8058 O_BomoASG17253_3prime_partial:A_BomoASG_c29779_g1_i4
369bp
 zinc_finger_protein_629_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0007423 P sensory organ development
GO:0007601 P visual perception
GO:0008407 P chaeta morphogenesis
GO:0008594 P photoreceptor cell morphogenesis
GO:0016360 P sensory organ precursor cell fate determination
GO:0042051 P compound eye photoreceptor development
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0043066 P negative regulation of apoptotic process
GO:0043425 F bHLH transcription factor binding
GO:0043565 F sequence-specific DNA binding
GO:0045464 P R8 cell fate specification
GO:0045465 P R8 cell differentiation
GO:0045872 P obsolete positive regulation of rhodopsin gene expression
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046530 P photoreceptor cell differentiation
GO:0046872 F metal ion binding
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0050896 P response to stimulus
8059 O_BomoASG17254_3prime_partial:A_BomoASG_c29780_g1_i1
150bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
8060 O_BomoASG17255_5prime_partial:A_BomoASG_c29780_g1_i1
104bp
8061 O_BomoASG17256_complete:A_BomoASG_c29780_g1_i2
248bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
8062 O_BomoASG17257_internal:A_BomoASG_c29781_g1_i1
912bp
 putative_transcription_factor_capicua_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0048286 P lung alveolus development
8063 O_BomoASG17258_complete:A_BomoASG_c29781_g1_i1
158bp
8064 O_BomoASG17259_complete:A_BomoASG_c29781_g1_i1
144bp
8065 O_BomoASG1725_internal:A_BomoASG_c11023_g1_i2
105bp
8066 O_BomoASG17260_internal:A_BomoASG_c29781_g1_i2
909bp
 putative_transcription_factor_capicua_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0048286 P lung alveolus development
8067 O_BomoASG17261_complete:A_BomoASG_c29781_g1_i2
158bp
8068 O_BomoASG17262_complete:A_BomoASG_c29781_g1_i2
144bp
8069 O_BomoASG17263_internal:A_BomoASG_c29781_g1_i3
886bp
 putative_transcription_factor_capicua_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0048286 P lung alveolus development
8070 O_BomoASG17264_complete:A_BomoASG_c29781_g1_i3
158bp
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