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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
781 O_BomoASG10703_internal:A_BomoASG_c26511_g1_i1
158bp
 integrator_complex_subunit_1-like_[Bombyx_mori]
782 O_BomoASG10704_5prime_partial:A_BomoASG_c26511_g1_i1
103bp
783 O_BomoASG10705_complete:A_BomoASG_c26514_g1_i1
149bp
 mitochondrial_single-stranded_DNA-binding_protein_[Bombyx_mori]
GO:0000002 P mitochondrial genome maintenance
GO:0000262 C mitochondrial chromosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006264 P mitochondrial DNA replication
784 O_BomoASG10706_internal:A_BomoASG_c26515_g1_i1
156bp
 exportin-6_[Bombyx_mori]
785 O_BomoASG10707_5prime_partial:A_BomoASG_c26515_g1_i1
107bp
786 O_BomoASG10708_3prime_partial:A_BomoASG_c26516_g1_i1
386bp
 protein_RFT1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005319 F lipid transporter activity
GO:0005575 C cellular_component
GO:0005789 C endoplasmic reticulum membrane
GO:0006869 P lipid transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034203 P glycolipid translocation
787 O_BomoASG10709_3prime_partial:A_BomoASG_c26516_g1_i2
386bp
 protein_RFT1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005319 F lipid transporter activity
GO:0005575 C cellular_component
GO:0005789 C endoplasmic reticulum membrane
GO:0006869 P lipid transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034203 P glycolipid translocation
788 O_BomoASG1070_internal:A_BomoASG_c6517_g1_i1
330bp
 activin_receptor_type-1_isoform_X2_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0001569 P branching involved in blood vessel morphogenesis
GO:0001702 P gastrulation with mouth forming second
GO:0001707 P mesoderm formation
GO:0001755 P neural crest cell migration
GO:0002526 P acute inflammatory response
GO:0003143 P embryonic heart tube morphogenesis
GO:0003183 P mitral valve morphogenesis
GO:0003289 P atrial septum primum morphogenesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004675 F transmembrane receptor protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005025 F transforming growth factor beta receptor activity, type I
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007178 P transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007281 P germ cell development
GO:0007368 P determination of left/right symmetry
GO:0007369 P gastrulation
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0009968 P negative regulation of signal transduction
GO:0010694 P positive regulation of alkaline phosphatase activity
GO:0010718 P positive regulation of epithelial to mesenchymal transition
GO:0010862 P positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016361 F activin receptor activity, type I
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0018107 P peptidyl-threonine phosphorylation
GO:0019838 F growth factor binding
GO:0023014 P signal transduction
GO:0030278 P regulation of ossification
GO:0030335 P positive regulation of cell migration
GO:0030501 P positive regulation of bone mineralization
GO:0030509 P BMP signaling pathway
GO:0030513 P positive regulation of BMP signaling pathway
GO:0032924 P activin receptor signaling pathway
GO:0032926 P negative regulation of activin receptor signaling pathway
GO:0035556 P intracellular signal transduction
GO:0042118 P endothelial cell activation
GO:0042803 F protein homodimerization activity
GO:0045177 C apical part of cell
GO:0045669 P positive regulation of osteoblast differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0048179 C activin receptor complex
GO:0048185 F activin binding
GO:0048762 P mesenchymal cell differentiation
GO:0050431 F transforming growth factor beta binding
GO:0051145 P smooth muscle cell differentiation
GO:0060037 P pharyngeal system development
GO:0060317 P cardiac epithelial to mesenchymal transition
GO:0060389 P pathway-restricted SMAD protein phosphorylation
GO:0060923 P cardiac muscle cell fate commitment
GO:0061445 P endocardial cushion cell fate commitment
GO:0071773 P cellular response to BMP stimulus
GO:2000017 P positive regulation of determination of dorsal identity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
789 O_BomoASG10710_5prime_partial:A_BomoASG_c26516_g1_i2
108bp
 ragulator_complex_protein_LAMTOR4_homolog_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005764 C lysosome
GO:0008361 P regulation of cell size
GO:0032008 P positive regulation of TOR signaling
GO:0032947 F molecular adaptor activity
GO:0043547 P positive regulation of GTPase activity
GO:0061462 P protein localization to lysosome
GO:0071230 P cellular response to amino acid stimulus
GO:0071986 C Ragulator complex
790 O_BomoASG10711_5prime_partial:A_BomoASG_c26521_g1_i1
336bp
 abhydrolase_domain_containing_11_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
791 O_BomoASG10712_3prime_partial:A_BomoASG_c26522_g1_i1
107bp
 PREDICTED:_uncharacterized_protein_LOC106711875_[Papilio_machaon]
792 O_BomoASG10713_3prime_partial:A_BomoASG_c26523_g1_i1
125bp
793 O_BomoASG10714_5prime_partial:A_BomoASG_c26523_g1_i1
123bp
 LOW_QUALITY_PROTEIN:_histone_H1.4-like,_partial_[Bombyx_mori]
794 O_BomoASG10715_internal:A_BomoASG_c26523_g2_i1
203bp
 hypothetical_protein_ALC57_18227,_partial_[Trachymyrmex_cornetzi]
795 O_BomoASG10716_3prime_partial:A_BomoASG_c26523_g2_i1
165bp
 histone_H1-like,_partial_[Bombyx_mori]
GO:0000786 C nucleosome
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006333 P chromatin assembly or disassembly
GO:0006334 P nucleosome assembly
GO:0006342 P heterochromatin assembly
GO:0031057 P negative regulation of histone modification
GO:0031490 F chromatin DNA binding
GO:0051276 P chromosome organization
796 O_BomoASG10717_internal:A_BomoASG_c26525_g1_i1
216bp
 protein_abrupt_[Bombyx_mori]
GO:0001223 F transcription coactivator binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008134 F transcription factor binding
GO:0008285 P negative regulation of cell population proliferation
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
797 O_BomoASG10718_internal:A_BomoASG_c26526_g1_i1
355bp
 lethal(3)malignant_brain_tumor-like_protein_3_isoform_X2_[Bombyx_mori]
798 O_BomoASG10719_5prime_partial:A_BomoASG_c26532_g1_i1
309bp
 condensin_complex_subunit_3_isoform_X1_[Bombyx_mori]
GO:0000796 C condensin complex
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0030261 P chromosome condensation
GO:0051301 P cell division
799 O_BomoASG1071_5prime_partial:A_BomoASG_c6517_g1_i1
264bp
 PREDICTED:_netrin_receptor_UNC5C_[Astyanax_mexicanus]
800 O_BomoASG10720_complete:A_BomoASG_c26534_g1_i1
156bp
 vitamin_K_epoxide_reductase_complex_subunit_1-like_protein_1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0017187 P peptidyl-glutamic acid carboxylation
GO:0034599 P cellular response to oxidative stress
GO:0042373 P vitamin K metabolic process
GO:0047057 F vitamin-K-epoxide reductase (warfarin-sensitive) activity
GO:0048038 F quinone binding
GO:0055114 P obsolete oxidation-reduction process
801 O_BomoASG10721_3prime_partial:A_BomoASG_c26536_g1_i1
1108bp
 integrator_complex_subunit_2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016180 P snRNA processing
GO:0031965 C nuclear membrane
GO:0032039 C integrator complex
GO:0042795 P snRNA transcription by RNA polymerase II
802 O_BomoASG10722_internal:A_BomoASG_c26536_g1_i2
1018bp
 integrator_complex_subunit_2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016180 P snRNA processing
GO:0031965 C nuclear membrane
GO:0032039 C integrator complex
GO:0042795 P snRNA transcription by RNA polymerase II
803 O_BomoASG10723_5prime_partial:A_BomoASG_c26539_g1_i2
147bp
804 O_BomoASG10724_5prime_partial:A_BomoASG_c26539_g1_i2
128bp
805 O_BomoASG10725_internal:A_BomoASG_c26540_g1_i1
197bp
 arfaptin-2,_partial_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005829 C cytosol
GO:0006886 P intracellular protein transport
GO:0019904 F protein domain specific binding
GO:0032588 C trans-Golgi network membrane
GO:0034315 P regulation of Arp2/3 complex-mediated actin nucleation
GO:0050708 P regulation of protein secretion
GO:0070273 F phosphatidylinositol-4-phosphate binding
806 O_BomoASG10726_complete:A_BomoASG_c26540_g1_i1
141bp
807 O_BomoASG10727_3prime_partial:A_BomoASG_c26540_g1_i2
224bp
 arfaptin-2,_partial_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005829 C cytosol
GO:0006886 P intracellular protein transport
GO:0019904 F protein domain specific binding
GO:0032588 C trans-Golgi network membrane
GO:0034315 P regulation of Arp2/3 complex-mediated actin nucleation
GO:0050708 P regulation of protein secretion
GO:0070273 F phosphatidylinositol-4-phosphate binding
808 O_BomoASG10728_complete:A_BomoASG_c26540_g1_i2
141bp
809 O_BomoASG10729_internal:A_BomoASG_c26541_g1_i1
326bp
 uncharacterized_protein_LOC101744402_[Bombyx_mori]
GO:0016567 P protein ubiquitination
810 O_BomoASG1072_complete:A_BomoASG_c6517_g1_i1
126bp
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