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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
751 O_BomoASG10677_complete:A_BomoASG_c26485_g1_i2
302bp
 PIH1_domain-containing_protein_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
752 O_BomoASG10678_5prime_partial:A_BomoASG_c26488_g1_i2
206bp
 uncharacterized_protein_LOC110384829_[Bombyx_mori]
753 O_BomoASG10679_5prime_partial:A_BomoASG_c26488_g1_i2
104bp
754 O_BomoASG1067_complete:A_BomoASG_c6510_g2_i1
113bp
 ribosomal_protein_P2_[Bombyx_mori]
GO:0000036 F acyl carrier activity
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006414 P translational elongation
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008610 P lipid biosynthetic process
GO:0030529 C ribonucleoprotein complex
755 O_BomoASG10680_3prime_partial:A_BomoASG_c26490_g1_i1
514bp
 zinc_finger_protein_260_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
756 O_BomoASG10681_complete:A_BomoASG_c26490_g1_i1
141bp
757 O_BomoASG10682_3prime_partial:A_BomoASG_c26491_g1_i1
108bp
 LOW_QUALITY_PROTEIN:_protein_son_of_sevenless_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007015 P actin filament organization
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0008293 P torso signaling pathway
GO:0008360 P regulation of cell shape
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016199 P axon midline choice point recognition
GO:0030154 P cell differentiation
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035022 P positive regulation of Rac protein signal transduction
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0045500 P sevenless signaling pathway
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0046982 F protein heterodimerization activity
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
758 O_BomoASG10683_5prime_partial:A_BomoASG_c26497_g1_i1
265bp
 EH_domain-binding_protein_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
759 O_BomoASG10684_3prime_partial:A_BomoASG_c26497_g1_i1
262bp
760 O_BomoASG10685_complete:A_BomoASG_c26497_g1_i1
111bp
761 O_BomoASG10686_internal:A_BomoASG_c26498_g1_i1
120bp
DUF1725_domain-containing_protein,_partial_[Mycobacterium_shimoidei]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
762 O_BomoASG10687_5prime_partial:A_BomoASG_c26502_g2_i1
162bp
 cytoplasmic_FMR1-interacting_protein_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001745 P compound eye morphogenesis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008360 P regulation of cell shape
GO:0017048 F small GTPase binding
GO:0022416 P chaeta development
GO:0030031 P cell projection assembly
GO:0030154 P cell differentiation
GO:0030866 P cortical actin cytoskeleton organization
GO:0031209 C SCAR complex
GO:0033627 P cell adhesion mediated by integrin
GO:0045177 C apical part of cell
GO:0045202 C synapse
GO:0050807 P regulation of synapse organization
763 O_BomoASG10688_5prime_partial:A_BomoASG_c26502_g2_i1
104bp
764 O_BomoASG10689_complete:A_BomoASG_c26504_g1_i1
244bp
 uncharacterized_protein_LOC101737875_isoform_X1_[Bombyx_mori]
765 O_BomoASG1068_complete:A_BomoASG_c6510_g2_i1
104bp
 conserved_hypothetical_protein_[Culex_quinquefasciatus]
766 O_BomoASG10690_complete:A_BomoASG_c26504_g1_i2
244bp
 uncharacterized_protein_LOC101737875_isoform_X1_[Bombyx_mori]
767 O_BomoASG10691_complete:A_BomoASG_c26504_g1_i3
244bp
 uncharacterized_protein_LOC101737875_isoform_X1_[Bombyx_mori]
768 O_BomoASG10692_complete:A_BomoASG_c26504_g1_i4
209bp
 uncharacterized_protein_LOC101737875_isoform_X3_[Bombyx_mori]
769 O_BomoASG10693_complete:A_BomoASG_c26507_g1_i1
203bp
 solute_carrier_family_22_member_16-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005887 C integral component of plasma membrane
GO:0015747 P urate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:0090416 F nicotinate transmembrane transporter activity
GO:2001142 P nicotinate transport
770 O_BomoASG10694_complete:A_BomoASG_c26507_g2_i1
104bp
771 O_BomoASG10695_complete:A_BomoASG_c26508_g1_i1
174bp
 globin_1_isoform_X1_[Bombyx_mori]
GO:0001666 P response to hypoxia
GO:0004096 F catalase activity
GO:0004601 F peroxidase activity
GO:0005344 F oxygen carrier activity
GO:0005506 F iron ion binding
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006979 P response to oxidative stress
GO:0010764 P negative regulation of fibroblast migration
GO:0015671 P oxygen transport
GO:0019395 P fatty acid oxidation
GO:0019825 F oxygen binding
GO:0020037 F heme binding
GO:0032966 P negative regulation of collagen biosynthetic process
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0047888 F fatty acid peroxidase activity
GO:0098869 P cellular oxidant detoxification
GO:2000490 P negative regulation of hepatic stellate cell activation
772 O_BomoASG10696_5prime_partial:A_BomoASG_c26508_g1_i1
102bp
773 O_BomoASG10697_5prime_partial:A_BomoASG_c26508_g1_i2
102bp
774 O_BomoASG10698_complete:A_BomoASG_c26508_g1_i3
174bp
 globin_1_isoform_X1_[Bombyx_mori]
GO:0001666 P response to hypoxia
GO:0004096 F catalase activity
GO:0004601 F peroxidase activity
GO:0005344 F oxygen carrier activity
GO:0005506 F iron ion binding
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006979 P response to oxidative stress
GO:0010764 P negative regulation of fibroblast migration
GO:0015671 P oxygen transport
GO:0019395 P fatty acid oxidation
GO:0019825 F oxygen binding
GO:0020037 F heme binding
GO:0032966 P negative regulation of collagen biosynthetic process
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0047888 F fatty acid peroxidase activity
GO:0098869 P cellular oxidant detoxification
GO:2000490 P negative regulation of hepatic stellate cell activation
775 O_BomoASG10699_5prime_partial:A_BomoASG_c26508_g1_i3
102bp
776 O_BomoASG1069_complete:A_BomoASG_c6514_g1_i1
171bp
 uncharacterized_protein_LOC101739113_[Bombyx_mori]
777 O_BomoASG106_complete:A_BomoASG_c616_g1_i1
466bp
 elongation_factor_Tu_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0016020 C membrane
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
GO:0070125 P mitochondrial translational elongation
778 O_BomoASG10700_5prime_partial:A_BomoASG_c26509_g1_i1
199bp
 kelch-like_ECH-associated_protein_1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043433 P negative regulation of DNA-binding transcription factor activity
779 O_BomoASG10701_3prime_partial:A_BomoASG_c26510_g1_i1
220bp
 mediator_of_RNA_polymerase_II_transcription_subunit_16_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
780 O_BomoASG10702_internal:A_BomoASG_c26510_g1_i2
193bp
 mediator_of_RNA_polymerase_II_transcription_subunit_16_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
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