Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
7471	O_BomoASG16725_complete:A_BomoASG_c29572_g1_i2 116bp	Bomo_Chr9
7472	O_BomoASG16726_complete:A_BomoASG_c29572_g1_i2 102bp	Bomo_Chr9
7473	O_BomoASG16727_complete:A_BomoASG_c29572_g1_i3 807bp	Bomo_Chr9	zinc_finger_MIZ_domain-containing_protein_1_isoform_X2_[Bombyx_mori]	GO:0001570 P vasculogenesis GO:0001701 P in utero embryonic development GO:0003007 P heart morphogenesis GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007296 P vitellogenesis GO:0007569 P cell aging GO:0008270 F zinc ion binding GO:0016607 C nuclear speck GO:0043231 C intracellular membrane-bounded organelle GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046872 F metal ion binding GO:0048146 P positive regulation of fibroblast proliferation GO:0048589 P developmental growth GO:0048844 P artery morphogenesis
7474	O_BomoASG16728_complete:A_BomoASG_c29572_g1_i3 144bp	Bomo_Chr9
7475	O_BomoASG16729_complete:A_BomoASG_c29572_g1_i3 116bp	Bomo_Chr9
7476	O_BomoASG1672_complete:A_BomoASG_c10601_g1_i1 151bp	Bomo_Chr23	ashwin-like_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005654 C nucleoplasm GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation GO:0008150 P biological_process GO:0048598 P embryonic morphogenesis GO:0072669 C tRNA-splicing ligase complex
7477	O_BomoASG16730_complete:A_BomoASG_c29572_g1_i3 102bp	Bomo_Chr9
7478	O_BomoASG16731_3prime_partial:A_BomoASG_c29574_g1_i1 443bp	Bomo_Chr12	DDB1-_and_CUL4-associated_factor_13_[Bombyx_mori]	GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006364 P rRNA processing GO:0016567 P protein ubiquitination GO:0030529 C ribonucleoprotein complex GO:0032040 C small-subunit processome GO:0042254 P ribosome biogenesis GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
7479	O_BomoASG16732_internal:A_BomoASG_c29574_g1_i2 378bp	Bomo_Chr12	DDB1-_and_CUL4-associated_factor_13_[Bombyx_mori]	GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006364 P rRNA processing GO:0016567 P protein ubiquitination GO:0030529 C ribonucleoprotein complex GO:0032040 C small-subunit processome GO:0042254 P ribosome biogenesis GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
7480	O_BomoASG16733_5prime_partial:A_BomoASG_c29575_g1_i1 120bp	Bomo_Chr11	uncharacterized_protein_C7orf26_homolog_[Bombyx_mori]
7481	O_BomoASG16734_5prime_partial:A_BomoASG_c29575_g1_i2 340bp	Bomo_Chr11	uncharacterized_protein_C7orf26_homolog_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
7482	O_BomoASG16735_5prime_partial:A_BomoASG_c29576_g1_i1 273bp	Bomo_Chr5	putative_deoxynucleoside_kinase_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004797 F thymidine kinase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0006139 P nucleobase-containing compound metabolic process GO:0006165 P nucleoside diphosphate phosphorylation GO:0006230 P TMP biosynthetic process GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0019136 F deoxynucleoside kinase activity GO:0019206 F nucleoside kinase activity GO:0046939 P nucleotide phosphorylation GO:0071897 P DNA biosynthetic process
7483	O_BomoASG16736_complete:A_BomoASG_c29576_g1_i1 138bp	Bomo_Chr5
7484	O_BomoASG16737_complete:A_BomoASG_c29577_g1_i1 1023bp	Bomo_Chr25	uncharacterized_protein_LOC101745223_isoform_X2_[Bombyx_mori]	GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0006810 P transport GO:0015031 P protein transport GO:0030121 C AP-1 adaptor complex GO:0030276 F clathrin binding GO:0043231 C intracellular membrane-bounded organelle GO:0046907 P intracellular transport
7485	O_BomoASG16738_5prime_partial:A_BomoASG_c29577_g1_i2 868bp	Bomo_Chr25	uncharacterized_protein_LOC101745223_isoform_X2_[Bombyx_mori]	GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0006810 P transport GO:0015031 P protein transport GO:0030121 C AP-1 adaptor complex GO:0030276 F clathrin binding GO:0043231 C intracellular membrane-bounded organelle GO:0046907 P intracellular transport
7486	O_BomoASG16739_5prime_partial:A_BomoASG_c29578_g1_i1 100bp	Bomo_Chr1
7487	O_BomoASG1673_internal:A_BomoASG_c10607_g1_i1 216bp	Bomo_Chr14	uncharacterized_protein_LOC101741429_[Bombyx_mori]
7488	O_BomoASG16740_5prime_partial:A_BomoASG_c29579_g2_i1 239bp	Bomo_Chr12	uncharacterized_protein_LOC105842101_[Bombyx_mori]	GO:0000387 P spliceosomal snRNP assembly GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0032797 C SMN complex GO:0034719 C SMN-Sm protein complex GO:0097504 C Gemini of coiled bodies
7489	O_BomoASG16741_complete:A_BomoASG_c29579_g2_i1 128bp	Bomo_Chr12
7490	O_BomoASG16742_5prime_partial:A_BomoASG_c29579_g2_i3 209bp	Bomo_Chr12	uncharacterized_protein_LOC105842101_[Bombyx_mori]	GO:0000387 P spliceosomal snRNP assembly GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0032797 C SMN complex GO:0034719 C SMN-Sm protein complex GO:0097504 C Gemini of coiled bodies
7491	O_BomoASG16743_complete:A_BomoASG_c29579_g2_i3 128bp	Bomo_Chr12
7492	O_BomoASG16744_5prime_partial:A_BomoASG_c29579_g2_i4 242bp	Bomo_Chr12	uncharacterized_protein_LOC105842101_[Bombyx_mori]	GO:0000387 P spliceosomal snRNP assembly GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0032797 C SMN complex GO:0034719 C SMN-Sm protein complex GO:0097504 C Gemini of coiled bodies
7493	O_BomoASG16745_complete:A_BomoASG_c29579_g2_i4 128bp	Bomo_Chr12
7494	O_BomoASG16746_5prime_partial:A_BomoASG_c29580_g2_i1 164bp	Bomo_Chr25	uncharacterized_protein_LOC101742722_[Bombyx_mori]
7495	O_BomoASG16747_3prime_partial:A_BomoASG_c29580_g2_i1 145bp	Bomo_Chr25	reverse_transcriptase_-_silkworm_transposon_Pao
7496	O_BomoASG16748_complete:A_BomoASG_c29581_g1_i1 473bp	Bomo_Chr17	zinc_finger_protein_583_isoform_X1_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
7497	O_BomoASG16749_complete:A_BomoASG_c29581_g1_i1 111bp	Bomo_Chr17
7498	O_BomoASG1674_internal:A_BomoASG_c10612_g1_i1 244bp	Bomo_Chr11	MATH_and_LRR_domain-containing_protein_PFE0570w_[Bombyx_mori]
7499	O_BomoASG16750_5prime_partial:A_BomoASG_c29581_g1_i3 482bp	Bomo_Chr17	zinc_finger_protein_583_isoform_X1_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
7500	O_BomoASG16751_complete:A_BomoASG_c29581_g1_i3 111bp	Bomo_Chr17