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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7441 O_BomoASG16699_complete:A_BomoASG_c29560_g1_i1
285bp
 39S_ribosomal_protein_L4,_mitochondrial_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022626 C cytosolic ribosome
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
7442 O_BomoASG1669_5prime_partial:A_BomoASG_c10553_g1_i1
124bp
7443 O_BomoASG166_3prime_partial:A_BomoASG_c1238_g1_i1
121bp
 spidroin-1_[Bombyx_mori]
7444 O_BomoASG16700_3prime_partial:A_BomoASG_c29563_g1_i1
661bp
 F-actin-uncapping_protein_LRRC16A_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030335 P positive regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0031252 C cell leading edge
GO:0031529 P ruffle organization
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0044351 P macropinocytosis
GO:0044354 C macropinosome
GO:0046415 P urate metabolic process
GO:0051496 P positive regulation of stress fiber assembly
GO:0051638 P barbed-end actin filament uncapping
GO:0051639 P actin filament network formation
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1902745 P positive regulation of lamellipodium organization
GO:2000813 P negative regulation of barbed-end actin filament capping
7445 O_BomoASG16701_5prime_partial:A_BomoASG_c29563_g1_i1
321bp
7446 O_BomoASG16702_complete:A_BomoASG_c29563_g1_i1
136bp
7447 O_BomoASG16703_3prime_partial:A_BomoASG_c29565_g1_i1
555bp
 putative_tick_transposon,_partial_[Operophtera_brumata]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
7448 O_BomoASG16704_complete:A_BomoASG_c29565_g1_i1
141bp
7449 O_BomoASG16705_complete:A_BomoASG_c29566_g1_i1
190bp
 28S_ribosomal_protein_S18b,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
7450 O_BomoASG16706_complete:A_BomoASG_c29567_g1_i4
281bp
 peroxisome_biogenesis_factor_2_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0007031 P peroxisome organization
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
7451 O_BomoASG16707_complete:A_BomoASG_c29567_g1_i7
281bp
 peroxisome_biogenesis_factor_2_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0007031 P peroxisome organization
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
7452 O_BomoASG16708_complete:A_BomoASG_c29568_g1_i2
331bp
 uncharacterized_protein_LOC101742632_[Bombyx_mori]
7453 O_BomoASG16709_complete:A_BomoASG_c29568_g1_i3
389bp
 uncharacterized_protein_LOC101742632_[Bombyx_mori]
7454 O_BomoASG1670_internal:A_BomoASG_c10555_g1_i1
103bp
 putative_DNA_helicase_[Cotesia_vestalis_bracovirus]
7455 O_BomoASG16710_3prime_partial:A_BomoASG_c29569_g1_i1
550bp
 ubiquitin_carboxyl-terminal_hydrolase_35_isoform_X1_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
7456 O_BomoASG16711_5prime_partial:A_BomoASG_c29569_g1_i1
107bp
7457 O_BomoASG16712_internal:A_BomoASG_c29569_g2_i1
219bp
 ubiquitin_carboxyl-terminal_hydrolase_35_isoform_X2_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0032153 C cell division site
GO:0034613 P cellular protein localization
GO:0036459 F thiol-dependent deubiquitinase
GO:0045013 P carbon catabolite repression of transcription
GO:0051286 C cell tip
7458 O_BomoASG16713_internal:A_BomoASG_c29571_g1_i1
414bp
 zinc_finger_protein_26-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7459 O_BomoASG16714_3prime_partial:A_BomoASG_c29571_g1_i1
129bp
7460 O_BomoASG16715_complete:A_BomoASG_c29571_g1_i1
105bp
7461 O_BomoASG16716_3prime_partial:A_BomoASG_c29571_g1_i2
471bp
 zinc_finger_protein_26-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7462 O_BomoASG16717_complete:A_BomoASG_c29571_g1_i2
141bp
7463 O_BomoASG16718_complete:A_BomoASG_c29571_g1_i2
105bp
7464 O_BomoASG16719_internal:A_BomoASG_c29571_g1_i3
219bp
 zinc_finger_protein_26-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7465 O_BomoASG1671_5prime_partial:A_BomoASG_c10576_g1_i1
116bp
 uncharacterized_protein_LOC101743387_isoform_X1_[Bombyx_mori]
7466 O_BomoASG16720_complete:A_BomoASG_c29572_g1_i1
812bp
 zinc_finger_MIZ_domain-containing_protein_1_isoform_X1_[Bombyx_mori]
GO:0001570 P vasculogenesis
GO:0001701 P in utero embryonic development
GO:0003007 P heart morphogenesis
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007296 P vitellogenesis
GO:0007569 P cell aging
GO:0008270 F zinc ion binding
GO:0016607 C nuclear speck
GO:0043231 C intracellular membrane-bounded organelle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048146 P positive regulation of fibroblast proliferation
GO:0048589 P developmental growth
GO:0048844 P artery morphogenesis
7467 O_BomoASG16721_complete:A_BomoASG_c29572_g1_i1
144bp
7468 O_BomoASG16722_complete:A_BomoASG_c29572_g1_i1
116bp
7469 O_BomoASG16723_complete:A_BomoASG_c29572_g1_i2
807bp
 zinc_finger_MIZ_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0001570 P vasculogenesis
GO:0001701 P in utero embryonic development
GO:0003007 P heart morphogenesis
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007296 P vitellogenesis
GO:0007569 P cell aging
GO:0008270 F zinc ion binding
GO:0016607 C nuclear speck
GO:0043231 C intracellular membrane-bounded organelle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048146 P positive regulation of fibroblast proliferation
GO:0048589 P developmental growth
GO:0048844 P artery morphogenesis
7470 O_BomoASG16724_complete:A_BomoASG_c29572_g1_i2
144bp
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