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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7291 O_BomoASG16563_complete:A_BomoASG_c29497_g1_i2
109bp
 Uncharacterized_protein_APZ42_028919_[Daphnia_magna]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
7292 O_BomoASG16564_5prime_partial:A_BomoASG_c29500_g1_i1
268bp
 CD63_antigen-like_[Bombyx_mori]
GO:0002092 P positive regulation of receptor internalization
GO:0005576 C extracellular region
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005771 C multivesicular body
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0012505 C endomembrane system
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016477 P cell migration
GO:0031226 C intrinsic component of plasma membrane
GO:0031902 C late endosome membrane
GO:0035646 P endosome to melanosome transport
GO:0042470 C melanosome
GO:0045807 P positive regulation of endocytosis
GO:0048757 P pigment granule maturation
GO:0070062 C extracellular exosome
GO:0097487 C multivesicular body, internal vesicle
GO:1900746 P regulation of vascular endothelial growth factor signaling pathway
GO:2001046 P positive regulation of integrin-mediated signaling pathway
7293 O_BomoASG16565_3prime_partial:A_BomoASG_c29503_g1_i1
382bp
 toll-like_receptor_6_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0008150 P biological_process
GO:0070062 C extracellular exosome
GO:0072562 C blood microparticle
7294 O_BomoASG16566_5prime_partial:A_BomoASG_c29504_g1_i1
280bp
 LOW_QUALITY_PROTEIN:_ATPase_WRNIP1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030174 P regulation of DNA-dependent DNA replication initiation
GO:0042802 F identical protein binding
GO:0048471 C perinuclear region of cytoplasm
7295 O_BomoASG16567_5prime_partial:A_BomoASG_c29504_g1_i3
293bp
 LOW_QUALITY_PROTEIN:_ATPase_WRNIP1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030174 P regulation of DNA-dependent DNA replication initiation
GO:0042802 F identical protein binding
GO:0048471 C perinuclear region of cytoplasm
7296 O_BomoASG16568_complete:A_BomoASG_c29504_g1_i3
140bp
 LOW_QUALITY_PROTEIN:_ATPase_WRNIP1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030174 P regulation of DNA-dependent DNA replication initiation
GO:0042802 F identical protein binding
GO:0048471 C perinuclear region of cytoplasm
7297 O_BomoASG16569_3prime_partial:A_BomoASG_c29504_g1_i3
139bp
 hypothetical_protein_ACD_48C00541G0003_[uncultured_bacterium]
7298 O_BomoASG1656_3prime_partial:A_BomoASG_c10448_g1_i1
151bp
 signal_transducing_adapter_molecule_2_[Bombyx_mori]
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0007165 P signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0031901 C early endosome membrane
GO:0033565 C ESCRT-0 complex
GO:0036258 P multivesicular body assembly
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:1903543 P positive regulation of exosomal secretion
GO:1903551 P regulation of extracellular exosome assembly
7299 O_BomoASG16570_5prime_partial:A_BomoASG_c29506_g1_i1
121bp
 histone_deacetylase_6_isoform_X1_[Bombyx_mori]
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006476 P protein deacetylation
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0033558 F protein deacetylase activity
GO:0046872 F metal ion binding
GO:0070932 P histone H3 deacetylation
7300 O_BomoASG16571_complete:A_BomoASG_c29506_g1_i2
361bp
 histone_deacetylase_6_isoform_X1_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006476 P protein deacetylation
GO:0014003 P oligodendrocyte development
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0019899 F enzyme binding
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0033558 F protein deacetylase activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070932 P histone H3 deacetylation
7301 O_BomoASG16572_3prime_partial:A_BomoASG_c29506_g1_i3
433bp
 histone_deacetylase_6_isoform_X1_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006476 P protein deacetylation
GO:0014003 P oligodendrocyte development
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0019899 F enzyme binding
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0033558 F protein deacetylase activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070932 P histone H3 deacetylation
7302 O_BomoASG16573_internal:A_BomoASG_c29507_g1_i1
124bp
 uncharacterized_protein_LOC101743382,_partial_[Bombyx_mori]
7303 O_BomoASG16574_internal:A_BomoASG_c29507_g1_i1
123bp
7304 O_BomoASG16575_3prime_partial:A_BomoASG_c29508_g2_i1
137bp
 sentrin-specific_protease_[Bombyx_mori]
7305 O_BomoASG16576_5prime_partial:A_BomoASG_c29509_g1_i1
110bp
 transcription_factor_cwo_isoform_X4_[Bombyx_mori]
GO:0001568 P blood vessel development
GO:0001570 P vasculogenesis
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007507 P heart development
GO:0035912 P dorsal aorta morphogenesis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046983 F protein dimerization activity
GO:0048514 P blood vessel morphogenesis
GO:0048844 P artery morphogenesis
GO:0060840 P artery development
GO:0060853 P Notch signaling pathway involved in arterial endothelial cell fate commitment
7306 O_BomoASG16577_5prime_partial:A_BomoASG_c29509_g1_i2
415bp
 transcription_factor_cwo_isoform_X4_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000983 F RNA polymerase II general transcription initiation factor activity
GO:0000988 F obsolete transcription factor activity, protein binding
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001568 P blood vessel development
GO:0001570 P vasculogenesis
GO:0003150 P muscular septum morphogenesis
GO:0003151 P outflow tract morphogenesis
GO:0003171 P atrioventricular valve development
GO:0003184 P pulmonary valve morphogenesis
GO:0003186 P tricuspid valve morphogenesis
GO:0003195 P tricuspid valve formation
GO:0003199 P endocardial cushion to mesenchymal transition involved in heart valve formation
GO:0003208 P cardiac ventricle morphogenesis
GO:0003214 P cardiac left ventricle morphogenesis
GO:0003215 P cardiac right ventricle morphogenesis
GO:0003222 P ventricular trabecula myocardium morphogenesis
GO:0003300 P cardiac muscle hypertrophy
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007389 P pattern specification process
GO:0007507 P heart development
GO:0008134 F transcription factor binding
GO:0009948 P anterior/posterior axis specification
GO:0010460 P positive regulation of heart rate
GO:0010468 P regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0010667 P negative regulation of cardiac muscle cell apoptotic process
GO:0014031 P mesenchymal cell development
GO:0014898 P cardiac muscle hypertrophy in response to stress
GO:0016580 C Sin3 complex
GO:0017053 C transcription repressor complex
GO:0035910 P ascending aorta morphogenesis
GO:0035912 P dorsal aorta morphogenesis
GO:0035939 F microsatellite binding
GO:0036304 P umbilical cord morphogenesis
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045607 P regulation of inner ear auditory receptor cell differentiation
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055015 P ventricular cardiac muscle cell development
GO:0060045 P positive regulation of cardiac muscle cell proliferation
GO:0060317 P cardiac epithelial to mesenchymal transition
GO:0060347 P heart trabecula formation
GO:0060411 P cardiac septum morphogenesis
GO:0060412 P ventricular septum morphogenesis
GO:0060413 P atrial septum morphogenesis
GO:0060633 P negative regulation of transcription initiation from RNA polymerase II promoter
GO:0060716 P labyrinthine layer blood vessel development
GO:0060840 P artery development
GO:0060842 P arterial endothelial cell differentiation
GO:0060948 P cardiac vascular smooth muscle cell development
GO:0060977 P coronary vasculature morphogenesis
GO:0061156 P pulmonary artery morphogenesis
GO:0061314 P Notch signaling involved in heart development
GO:0065004 P protein-DNA complex assembly
GO:0090102 P cochlea development
GO:0097084 P vascular associated smooth muscle cell development
GO:2000678 P negative regulation of transcription regulatory region DNA binding
GO:2000820 P negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation
GO:2001212 P regulation of vasculogenesis
7307 O_BomoASG16578_complete:A_BomoASG_c29509_g1_i2
122bp
7308 O_BomoASG16579_complete:A_BomoASG_c29509_g1_i3
336bp
 hairy/enhancer-of-split_related_with_YRPW_motif_protein_isoform_X3_[Bombyx_mori]
7309 O_BomoASG1657_complete:A_BomoASG_c10470_g1_i1
129bp
7310 O_BomoASG16580_5prime_partial:A_BomoASG_c29511_g2_i1
322bp
 phospholipase_C_gamma_isoform_X2_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0001726 C ruffle
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0004435 F phosphatidylinositol phospholipase C activity
GO:0004871 F obsolete signal transducer activity
GO:0005168 F neurotrophin TRKA receptor binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006629 P lipid metabolic process
GO:0007165 P signal transduction
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008081 F phosphoric diester hydrolase activity
GO:0008180 C COP9 signalosome
GO:0009395 P phospholipid catabolic process
GO:0010634 P positive regulation of epithelial cell migration
GO:0016042 P lipid catabolic process
GO:0016477 P cell migration
GO:0016787 F hydrolase activity
GO:0019722 P calcium-mediated signaling
GO:0019901 F protein kinase binding
GO:0030027 C lamellipodium
GO:0030971 F receptor tyrosine kinase binding
GO:0035254 F glutamate receptor binding
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0043536 P positive regulation of blood vessel endothelial cell migration
GO:0045766 P positive regulation of angiogenesis
GO:0046872 F metal ion binding
GO:0050852 P T cell receptor signaling pathway
GO:0051281 P positive regulation of release of sequestered calcium ion into cytosol
GO:0071364 P cellular response to epidermal growth factor stimulus
7311 O_BomoASG16581_5prime_partial:A_BomoASG_c29511_g2_i1
143bp
7312 O_BomoASG16582_complete:A_BomoASG_c29511_g2_i1
131bp
7313 O_BomoASG16583_3prime_partial:A_BomoASG_c29513_g1_i1
103bp
7314 O_BomoASG16584_complete:A_BomoASG_c29513_g1_i2
440bp
 alpha-(1,3)-fucosyltransferase_7-like_[Bombyx_mori]
GO:0002361 P CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation
GO:0002522 P leukocyte migration involved in immune response
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008417 F fucosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0032580 C Golgi cisterna membrane
GO:0036065 P fucosylation
7315 O_BomoASG16585_internal:A_BomoASG_c29514_g1_i1
383bp
 DENN_domain-containing_protein_4C_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005794 C Golgi apparatus
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0032483 P regulation of Rab protein signal transduction
GO:0043547 P positive regulation of GTPase activity
7316 O_BomoASG16586_internal:A_BomoASG_c29516_g1_i2
260bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X4_[Papilio_machaon]
7317 O_BomoASG16587_3prime_partial:A_BomoASG_c29516_g2_i2
137bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X4_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
7318 O_BomoASG16588_5prime_partial:A_BomoASG_c29516_g2_i2
118bp
 PREDICTED:_uncharacterized_protein_LOC106718363_[Papilio_machaon]
7319 O_BomoASG16589_3prime_partial:A_BomoASG_c29517_g1_i1
300bp
 serine_hydrolase-like_protein_isoform_X1_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
7320 O_BomoASG1658_internal:A_BomoASG_c10473_g1_i1
102bp
 Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
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