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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7261 O_BomoASG16536_internal:A_BomoASG_c29488_g3_i1
325bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
7262 O_BomoASG16537_internal:A_BomoASG_c29488_g3_i2
360bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
7263 O_BomoASG16538_5prime_partial:A_BomoASG_c29489_g1_i1
352bp
 uncharacterized_protein_LOC101740358_isoform_X3_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0009986 C cell surface
GO:0051260 P protein homooligomerization
GO:0051291 P protein heterooligomerization
7264 O_BomoASG16539_complete:A_BomoASG_c29489_g1_i1
115bp
7265 O_BomoASG1653_5prime_partial:A_BomoASG_c10424_g1_i1
178bp
 lysosomal-trafficking_regulator_[Bombyx_mori]
7266 O_BomoASG16540_complete:A_BomoASG_c29491_g1_i1
303bp
 cyclin-dependent_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002088 P lens development in camera-type eye
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0009636 P response to toxic substance
GO:0015030 C Cajal body
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030332 F cyclin binding
GO:0031100 P animal organ regeneration
GO:0032355 P response to estradiol
GO:0032403 F protein-containing complex binding
GO:0032869 P cellular response to insulin stimulus
GO:0042493 P response to xenobiotic stimulus
GO:0043231 C intracellular membrane-bounded organelle
GO:0045471 P response to ethanol
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0051591 P response to cAMP
GO:0051602 P response to electrical stimulus
GO:0051726 P regulation of cell cycle
7267 O_BomoASG16541_complete:A_BomoASG_c29491_g1_i2
234bp
 cyclin-dependent_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002088 P lens development in camera-type eye
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0009636 P response to toxic substance
GO:0015030 C Cajal body
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030332 F cyclin binding
GO:0031100 P animal organ regeneration
GO:0032355 P response to estradiol
GO:0032403 F protein-containing complex binding
GO:0032869 P cellular response to insulin stimulus
GO:0042493 P response to xenobiotic stimulus
GO:0043231 C intracellular membrane-bounded organelle
GO:0045471 P response to ethanol
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0051591 P response to cAMP
GO:0051602 P response to electrical stimulus
GO:0051726 P regulation of cell cycle
7268 O_BomoASG16542_complete:A_BomoASG_c29491_g2_i1
397bp
 E3_ubiquitin-protein_ligase_RNF13_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005637 C nuclear inner membrane
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031902 C late endosome membrane
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
7269 O_BomoASG16543_complete:A_BomoASG_c29491_g2_i1
205bp
7270 O_BomoASG16544_complete:A_BomoASG_c29491_g3_i1
241bp
 pre-mRNA-splicing_factor_SPF27_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030054 C cell junction
GO:0071011 C precatalytic spliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
7271 O_BomoASG16545_complete:A_BomoASG_c29491_g3_i1
114bp
7272 O_BomoASG16546_complete:A_BomoASG_c29491_g3_i2
241bp
 pre-mRNA-splicing_factor_SPF27_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030054 C cell junction
GO:0071011 C precatalytic spliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
7273 O_BomoASG16547_complete:A_BomoASG_c29491_g3_i2
114bp
7274 O_BomoASG16548_5prime_partial:A_BomoASG_c29492_g1_i1
406bp
 protein_mahjong_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008180 C COP9 signalosome
GO:0016032 P viral process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0030183 P B cell differentiation
GO:0033151 P V(D)J recombination
GO:0035212 P cell competition in a multicellular organism
GO:1990244 F histone kinase activity (H2A-T120 specific)
GO:1990245 P histone H2A-T120 phosphorylation
7275 O_BomoASG16549_5prime_partial:A_BomoASG_c29492_g1_i1
193bp
7276 O_BomoASG1654_3prime_partial:A_BomoASG_c10447_g1_i1
431bp
 dual_specificity_protein_kinase_pom1_isoform_X3_[Bombyx_mori]
7277 O_BomoASG16550_complete:A_BomoASG_c29492_g1_i1
146bp
7278 O_BomoASG16551_complete:A_BomoASG_c29492_g1_i1
130bp
7279 O_BomoASG16552_complete:A_BomoASG_c29493_g1_i1
157bp
 putative_peptidyl-prolyl_cis-trans_isomerase_dodo_[Helicoverpa_armigera]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
7280 O_BomoASG16553_5prime_partial:A_BomoASG_c29493_g2_i1
161bp
 COMM_domain_containing_4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
7281 O_BomoASG16554_5prime_partial:A_BomoASG_c29493_g1_i2
139bp
 putative_peptidyl-prolyl_cis-trans_isomerase_dodo_[Helicoverpa_armigera]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
7282 O_BomoASG16555_5prime_partial:A_BomoASG_c29493_g1_i3
114bp
 putative_peptidyl-prolyl_cis-trans_isomerase_dodo_[Helicoverpa_armigera]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
7283 O_BomoASG16556_complete:A_BomoASG_c29493_g2_i2
195bp
 COMM_domain_containing_4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
7284 O_BomoASG16557_complete:A_BomoASG_c29495_g1_i1
717bp
 uncharacterized_protein_LOC101738297_[Bombyx_mori]
GO:0046872 F metal ion binding
7285 O_BomoASG16558_internal:A_BomoASG_c29496_g1_i1
917bp
 HEAT_repeat-containing_protein_6_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0008150 P biological_process
7286 O_BomoASG16559_complete:A_BomoASG_c29496_g1_i1
157bp
7287 O_BomoASG1655_5prime_partial:A_BomoASG_c10448_g1_i1
175bp
7288 O_BomoASG16560_internal:A_BomoASG_c29496_g1_i2
622bp
 HEAT_repeat-containing_protein_6_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0008150 P biological_process
7289 O_BomoASG16561_complete:A_BomoASG_c29496_g1_i2
157bp
7290 O_BomoASG16562_complete:A_BomoASG_c29497_g1_i1
126bp
 Uncharacterized_protein_APZ42_028919_[Daphnia_magna]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
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