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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7171 O_BomoASG16455_complete:A_BomoASG_c29473_g1_i1
208bp
 kxDL_motif-containing_protein_CG10681_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
7172 O_BomoASG16456_complete:A_BomoASG_c29474_g1_i1
281bp
 transmembrane_protein_177_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7173 O_BomoASG16457_3prime_partial:A_BomoASG_c29474_g1_i2
153bp
 transmembrane_protein_177_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7174 O_BomoASG16458_complete:A_BomoASG_c29474_g1_i2
105bp
 transmembrane_protein_177_[Bombyx_mori]
7175 O_BomoASG16459_5prime_partial:A_BomoASG_c29475_g2_i1
111bp
 hypothetical_protein_RR46_02018_[Papilio_xuthus]
7176 O_BomoASG1645_internal:A_BomoASG_c10387_g1_i1
142bp
 uncharacterized_protein_LOC101746443_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005856 C cytoskeleton
GO:0008289 F lipid binding
GO:0042995 C cell projection
GO:0043197 C dendritic spine
GO:0051835 P positive regulation of synapse structural plasticity
7177 O_BomoASG16460_5prime_partial:A_BomoASG_c29475_g2_i2
123bp
 hypothetical_protein_RR46_02018_[Papilio_xuthus]
7178 O_BomoASG16461_5prime_partial:A_BomoASG_c29475_g2_i3
221bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
7179 O_BomoASG16462_5prime_partial:A_BomoASG_c29475_g2_i3
121bp
 hypothetical_protein_RR46_02018_[Papilio_xuthus]
7180 O_BomoASG16463_complete:A_BomoASG_c29476_g1_i1
848bp
 uncharacterized_protein_LOC101744580_[Bombyx_mori]
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
7181 O_BomoASG16464_complete:A_BomoASG_c29476_g1_i1
137bp
7182 O_BomoASG16465_complete:A_BomoASG_c29476_g1_i2
506bp
 uncharacterized_protein_LOC101744580_[Bombyx_mori]
7183 O_BomoASG16466_complete:A_BomoASG_c29476_g1_i2
137bp
7184 O_BomoASG16467_5prime_partial:A_BomoASG_c29476_g1_i2
112bp
7185 O_BomoASG16468_complete:A_BomoASG_c29476_g1_i3
870bp
 uncharacterized_protein_LOC101744580_[Bombyx_mori]
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
7186 O_BomoASG16469_complete:A_BomoASG_c29476_g1_i3
137bp
7187 O_BomoASG1646_3prime_partial:A_BomoASG_c10387_g1_i1
111bp
7188 O_BomoASG16470_complete:A_BomoASG_c29476_g1_i4
860bp
 uncharacterized_protein_LOC101744580_[Bombyx_mori]
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
7189 O_BomoASG16471_complete:A_BomoASG_c29476_g1_i4
137bp
7190 O_BomoASG16472_3prime_partial:A_BomoASG_c29477_g1_i1
880bp
 protein_AF-10_isoform_X16_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
7191 O_BomoASG16473_complete:A_BomoASG_c29477_g1_i1
136bp
7192 O_BomoASG16474_complete:A_BomoASG_c29477_g1_i1
121bp
7193 O_BomoASG16475_5prime_partial:A_BomoASG_c29477_g1_i1
112bp
GO:0000738 P DNA catabolic process, exonucleolytic
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006308 P DNA catabolic process
GO:0008152 P metabolic process
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0071897 P DNA biosynthetic process
7194 O_BomoASG16476_complete:A_BomoASG_c29477_g1_i1
109bp
7195 O_BomoASG16477_internal:A_BomoASG_c29477_g1_i2
534bp
 protein_AF-10_isoform_X18_[Bombyx_mori]
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0016246 P RNA interference
GO:0046872 F metal ion binding
7196 O_BomoASG16478_complete:A_BomoASG_c29477_g1_i2
136bp
7197 O_BomoASG16479_complete:A_BomoASG_c29477_g1_i2
121bp
7198 O_BomoASG1647_internal:A_BomoASG_c10392_g1_i1
174bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
7199 O_BomoASG16480_5prime_partial:A_BomoASG_c29477_g1_i2
112bp
GO:0000738 P DNA catabolic process, exonucleolytic
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006308 P DNA catabolic process
GO:0008152 P metabolic process
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0071897 P DNA biosynthetic process
7200 O_BomoASG16481_3prime_partial:A_BomoASG_c29477_g1_i3
848bp
 protein_AF-10_isoform_X18_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
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