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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7051 O_BomoASG16347_internal:A_BomoASG_c29426_g1_i1
160bp
 DNA_cytosine-5_methyltransferase_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
7052 O_BomoASG16348_3prime_partial:A_BomoASG_c29426_g1_i2
317bp
 DNA_cytosine-5_methyltransferase_[Bombyx_mori]
GO:0001975 P response to amphetamine
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
7053 O_BomoASG16349_3prime_partial:A_BomoASG_c29428_g1_i1
155bp
 G_patch_domain_and_ankyrin_repeat-containing_protein_1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
7054 O_BomoASG1634_internal:A_BomoASG_c10264_g1_i1
125bp
 uncharacterized_protein_LOC101739091_isoform_X3_[Bombyx_mori]
7055 O_BomoASG16350_internal:A_BomoASG_c29428_g1_i2
306bp
 G_patch_domain_and_ankyrin_repeat-containing_protein_1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
7056 O_BomoASG16351_complete:A_BomoASG_c29428_g1_i2
132bp
7057 O_BomoASG16352_complete:A_BomoASG_c29429_g1_i1
207bp
 mpv17-like_protein_2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7058 O_BomoASG16353_5prime_partial:A_BomoASG_c29429_g1_i2
164bp
 mpv17-like_protein_2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7059 O_BomoASG16354_complete:A_BomoASG_c29429_g1_i3
207bp
 mpv17-like_protein_2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7060 O_BomoASG16355_5prime_partial:A_BomoASG_c29430_g2_i1
1152bp
 uncharacterized_protein_LOC105841518_[Bombyx_mori]
7061 O_BomoASG16356_complete:A_BomoASG_c29430_g2_i1
153bp
7062 O_BomoASG16357_complete:A_BomoASG_c29430_g2_i1
123bp
7063 O_BomoASG16358_internal:A_BomoASG_c29431_g1_i1
407bp
 ATP-dependent_RNA_helicase_DHX36_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001503 P ossification
GO:0002151 F G-quadruplex RNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0009615 P response to virus
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032206 P positive regulation of telomere maintenance
GO:0042826 F histone deacetylase binding
GO:0043330 P response to exogenous dsRNA
GO:0044212 F transcription cis-regulatory region binding
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051880 F G-quadruplex DNA binding
GO:0070062 C extracellular exosome
7064 O_BomoASG16359_3prime_partial:A_BomoASG_c29432_g1_i1
362bp
 anaphase-promoting_complex_subunit_5_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005680 C anaphase-promoting complex
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016567 P protein ubiquitination
GO:0019903 F protein phosphatase binding
GO:0051301 P cell division
GO:0070979 P protein K11-linked ubiquitination
7065 O_BomoASG1635_internal:A_BomoASG_c10274_g1_i1
135bp
 uncharacterized_protein_LOC101738890_[Bombyx_mori]
7066 O_BomoASG16360_3prime_partial:A_BomoASG_c29432_g1_i2
358bp
 anaphase-promoting_complex_subunit_5_isoform_X2_[Bombyx_mori]
GO:0005680 C anaphase-promoting complex
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016567 P protein ubiquitination
GO:0051301 P cell division
GO:0070979 P protein K11-linked ubiquitination
7067 O_BomoASG16361_5prime_partial:A_BomoASG_c29435_g1_i1
357bp
 death_related_ced-3/Nedd2-like_protein_[Bombyx_mori]
GO:0002376 P immune system process
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008656 F cysteine-type endopeptidase activator activity involved in apoptotic process
GO:0016787 F hydrolase activity
GO:0045087 P innate immune response
GO:0050829 P defense response to Gram-negative bacterium
7068 O_BomoASG16362_internal:A_BomoASG_c29436_g1_i1
409bp
 prolyl_3-hydroxylase_sudestada1_[Bombyx_mori]
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006449 P regulation of translational termination
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0018126 P protein hydroxylation
GO:0019511 P peptidyl-proline hydroxylation
GO:0031418 F L-ascorbic acid binding
GO:0031543 F peptidyl-proline dioxygenase activity
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
7069 O_BomoASG16363_internal:A_BomoASG_c29436_g1_i2
266bp
 prolyl_3-hydroxylase_sudestada1_[Bombyx_mori]
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006449 P regulation of translational termination
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0018126 P protein hydroxylation
GO:0019511 P peptidyl-proline hydroxylation
GO:0031418 F L-ascorbic acid binding
GO:0031543 F peptidyl-proline dioxygenase activity
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
7070 O_BomoASG16364_3prime_partial:A_BomoASG_c29437_g2_i1
276bp
 peptidylglycine_alpha-hydroxylating_monooxygenase_[Bombyx_mori]
GO:0001519 P peptide amidation
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0004504 F peptidylglycine monooxygenase activity
GO:0005507 F copper ion binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006518 P peptide metabolic process
GO:0007613 P memory
GO:0009620 P response to fungus
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016715 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen
GO:0032504 P multicellular organism reproduction
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
7071 O_BomoASG16365_5prime_partial:A_BomoASG_c29437_g2_i1
118bp
7072 O_BomoASG16366_complete:A_BomoASG_c29437_g2_i2
337bp
 peptidylglycine_alpha-hydroxylating_monooxygenase_[Bombyx_mori]
GO:0001519 P peptide amidation
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0004504 F peptidylglycine monooxygenase activity
GO:0005507 F copper ion binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006518 P peptide metabolic process
GO:0007613 P memory
GO:0009620 P response to fungus
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016715 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen
GO:0032504 P multicellular organism reproduction
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
7073 O_BomoASG16367_complete:A_BomoASG_c29437_g2_i2
185bp
7074 O_BomoASG16368_5prime_partial:A_BomoASG_c29438_g1_i1
121bp
 hypothetical_protein_RR46_13726_[Papilio_xuthus]
7075 O_BomoASG16369_3prime_partial:A_BomoASG_c29439_g1_i1
469bp
 uncharacterized_protein_LOC101739253_[Bombyx_mori]
7076 O_BomoASG1636_5prime_partial:A_BomoASG_c10281_g1_i1
127bp
7077 O_BomoASG16370_5prime_partial:A_BomoASG_c29439_g1_i1
141bp
7078 O_BomoASG16371_complete:A_BomoASG_c29439_g1_i2
412bp
 uncharacterized_protein_LOC101739253_[Bombyx_mori]
7079 O_BomoASG16372_5prime_partial:A_BomoASG_c29439_g1_i3
141bp
7080 O_BomoASG16373_3prime_partial:A_BomoASG_c29439_g1_i3
112bp
 uncharacterized_protein_LOC101739253_[Bombyx_mori]
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