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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7021 O_BomoASG1631_internal:A_BomoASG_c10214_g1_i1
216bp
 uncharacterized_protein_LOC110385508_isoform_X2_[Bombyx_mori]
7022 O_BomoASG16320_complete:A_BomoASG_c29413_g1_i1
193bp
 mitochondrial_import_inner_membrane_translocase_subunit_Tim23_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0005758 C mitochondrial intermembrane space
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0015266 F protein transmembrane transporter activity
GO:0015450 F protein-transporting ATPase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030150 P protein import into mitochondrial matrix
GO:0031305 C integral component of mitochondrial inner membrane
7023 O_BomoASG16321_complete:A_BomoASG_c29415_g1_i1
164bp
 cyclic_AMP-regulated_protein_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
GO:0019899 F enzyme binding
GO:0050832 P defense response to fungus
GO:0070062 C extracellular exosome
7024 O_BomoASG16322_complete:A_BomoASG_c29416_g1_i2
301bp
 GPN-loop_GTPase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
7025 O_BomoASG16323_complete:A_BomoASG_c29416_g1_i2
141bp
 hypothetical_protein_RR48_15076_[Papilio_machaon]
GO:0000502 C proteasome complex
7026 O_BomoASG16324_complete:A_BomoASG_c29418_g2_i1
434bp
 uncharacterized_protein_LOC101736400_[Bombyx_mori]
7027 O_BomoASG16325_complete:A_BomoASG_c29418_g2_i2
713bp
 uncharacterized_protein_LOC101736400_[Bombyx_mori]
7028 O_BomoASG16326_complete:A_BomoASG_c29418_g2_i2
200bp
7029 O_BomoASG16327_complete:A_BomoASG_c29418_g2_i2
128bp
7030 O_BomoASG16328_internal:A_BomoASG_c29419_g1_i1
524bp
 nucleolar_protein_11_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0030490 P maturation of SSU-rRNA
GO:1901838 P positive regulation of transcription of nucleolar large rRNA by RNA polymerase I
7031 O_BomoASG16329_internal:A_BomoASG_c29419_g1_i2
340bp
 nucleolar_protein_11_[Bombyx_mori]
7032 O_BomoASG1632_complete:A_BomoASG_c10214_g1_i1
111bp
7033 O_BomoASG16330_3prime_partial:A_BomoASG_c29419_g1_i3
542bp
 nucleolar_protein_11_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0030490 P maturation of SSU-rRNA
GO:1901838 P positive regulation of transcription of nucleolar large rRNA by RNA polymerase I
7034 O_BomoASG16331_5prime_partial:A_BomoASG_c29420_g1_i1
174bp
 nicotinate_phosphoribosyltransferase_isoform_X3_[Bombyx_mori]
GO:0004514 F nicotinate-nucleotide diphosphorylase (carboxylating) activity
GO:0004516 F nicotinate phosphoribosyltransferase activity
GO:0005829 C cytosol
GO:0006979 P response to oxidative stress
GO:0009435 P NAD biosynthetic process
GO:0016740 F transferase activity
GO:0016874 F ligase activity
GO:0019358 P nicotinate nucleotide salvage
GO:0019363 P pyridine nucleotide biosynthetic process
7035 O_BomoASG16332_complete:A_BomoASG_c29420_g1_i2
550bp
 nicotinate_phosphoribosyltransferase_isoform_X1_[Bombyx_mori]
GO:0004514 F nicotinate-nucleotide diphosphorylase (carboxylating) activity
GO:0004516 F nicotinate phosphoribosyltransferase activity
GO:0005829 C cytosol
GO:0006979 P response to oxidative stress
GO:0009435 P NAD biosynthetic process
GO:0016740 F transferase activity
GO:0016874 F ligase activity
GO:0019358 P nicotinate nucleotide salvage
GO:0019363 P pyridine nucleotide biosynthetic process
7036 O_BomoASG16333_complete:A_BomoASG_c29420_g1_i2
184bp
7037 O_BomoASG16334_internal:A_BomoASG_c29421_g1_i1
991bp
 uncharacterized_protein_LOC105841473_[Bombyx_mori]
GO:0000002 P mitochondrial genome maintenance
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005657 C replication fork
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0010521 F telomerase inhibitor activity
GO:0016787 F hydrolase activity
GO:0032211 P negative regulation of telomere maintenance via telomerase
GO:0032508 P DNA duplex unwinding
GO:0043141 F 5'-3' DNA helicase activity
GO:0044806 P G-quadruplex DNA unwinding
GO:0051974 P negative regulation of telomerase activity
7038 O_BomoASG16335_internal:A_BomoASG_c29421_g2_i1
158bp
 uncharacterized_protein_LOC105841473_[Bombyx_mori]
7039 O_BomoASG16336_3prime_partial:A_BomoASG_c29424_g1_i1
300bp
 reverse_transcriptase_[Bombyx_mori]
7040 O_BomoASG16337_5prime_partial:A_BomoASG_c29424_g1_i1
144bp
 unnamed_protein_product,_partial_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004533 F exoribonuclease H activity
GO:0005198 F structural molecule activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0008289 F lipid binding
GO:0015074 P DNA integration
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0019028 C viral capsid
GO:0019076 P viral release from host cell
GO:0020002 C host cell plasma membrane
GO:0030430 C host cell cytoplasm
GO:0033644 C host cell membrane
GO:0039657 P suppression by virus of host gene expression
GO:0042025 C host cell nucleus
GO:0044174 C host cell endosome
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0055036 C virion membrane
GO:0071897 P DNA biosynthetic process
GO:0072494 C host multivesicular body
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
7041 O_BomoASG16338_complete:A_BomoASG_c29424_g1_i1
115bp
7042 O_BomoASG16339_internal:A_BomoASG_c29424_g1_i2
184bp
 reverse_transcriptase_[Bombyx_mori]
7043 O_BomoASG1633_internal:A_BomoASG_c10243_g1_i1
159bp
 gag_pol_polyprotein_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
7044 O_BomoASG16340_internal:A_BomoASG_c29424_g3_i1
101bp
 reverse_transcriptase_[Bombyx_mori]
7045 O_BomoASG16341_internal:A_BomoASG_c29425_g1_i1
347bp
 spatacsin_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008088 P axo-dendritic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0048675 P axon extension
GO:0070062 C extracellular exosome
7046 O_BomoASG16342_internal:A_BomoASG_c29425_g1_i2
369bp
 spatacsin_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008088 P axo-dendritic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0048675 P axon extension
GO:0070062 C extracellular exosome
7047 O_BomoASG16343_internal:A_BomoASG_c29425_g1_i3
395bp
 spatacsin_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008088 P axo-dendritic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0048675 P axon extension
GO:0070062 C extracellular exosome
7048 O_BomoASG16344_internal:A_BomoASG_c29425_g2_i1
312bp
 spatacsin_[Bombyx_mori]
7049 O_BomoASG16345_3prime_partial:A_BomoASG_c29425_g2_i2
328bp
 spatacsin_[Bombyx_mori]
7050 O_BomoASG16346_3prime_partial:A_BomoASG_c29425_g2_i3
328bp
 spatacsin_[Bombyx_mori]
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