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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6841 O_BomoASG16158_complete:A_BomoASG_c29355_g1_i3
112bp
 splicing_factor_arginine/serine-rich_6_isoform_X4_[Bombyx_mori]
6842 O_BomoASG16159_complete:A_BomoASG_c29355_g1_i4
364bp
 splicing_factor_arginine/serine-rich_6_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0007067 P mitotic cell cycle
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0016607 C nuclear speck
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035062 C omega speckle
GO:0035327 C euchromatin
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6843 O_BomoASG1615_complete:A_BomoASG_c10039_g1_i1
342bp
 aldo-keto_reductase_AKR2E4-like_[Bombyx_mori]
GO:0006629 P lipid metabolic process
GO:0008202 P steroid metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
6844 O_BomoASG16160_complete:A_BomoASG_c29355_g1_i4
155bp
6845 O_BomoASG16161_complete:A_BomoASG_c29355_g1_i4
145bp
6846 O_BomoASG16162_complete:A_BomoASG_c29356_g1_i1
275bp
 1-acyl-sn-glycerol-3-phosphate_acyltransferase_alpha-like_[Bombyx_mori]
GO:0001819 P positive regulation of cytokine production
GO:0001961 P positive regulation of cytokine-mediated signaling pathway
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006644 P phospholipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0031325 P positive regulation of cellular metabolic process
6847 O_BomoASG16163_5prime_partial:A_BomoASG_c29357_g1_i2
212bp
 putative_Copia_protein_[Danaus_plexippus_plexippus]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
6848 O_BomoASG16164_5prime_partial:A_BomoASG_c29357_g1_i3
290bp
 putative_Copia_protein_[Danaus_plexippus_plexippus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
6849 O_BomoASG16165_complete:A_BomoASG_c29358_g1_i1
267bp
 ankyrin_repeat_domain-containing_protein_54_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006913 P nucleocytoplasmic transport
GO:0019887 F protein kinase regulator activity
GO:0030496 C midbody
GO:0032403 F protein-containing complex binding
GO:0045648 P positive regulation of erythrocyte differentiation
GO:0045859 P regulation of protein kinase activity
GO:1902531 P regulation of intracellular signal transduction
6850 O_BomoASG16166_complete:A_BomoASG_c29359_g2_i2
553bp
 regulator_of_chromosome_condensation_[Bombyx_mori]
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005087 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0007346 P regulation of mitotic cell cycle
GO:0007417 P central nervous system development
GO:0007419 P ventral cord development
GO:0022008 P neurogenesis
GO:0043547 P positive regulation of GTPase activity
GO:0046822 P regulation of nucleocytoplasmic transport
GO:0050767 P regulation of neurogenesis
GO:0051301 P cell division
6851 O_BomoASG16167_complete:A_BomoASG_c29359_g2_i2
147bp
6852 O_BomoASG16168_complete:A_BomoASG_c29359_g2_i3
553bp
 regulator_of_chromosome_condensation_[Bombyx_mori]
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005087 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0007346 P regulation of mitotic cell cycle
GO:0007417 P central nervous system development
GO:0007419 P ventral cord development
GO:0022008 P neurogenesis
GO:0043547 P positive regulation of GTPase activity
GO:0046822 P regulation of nucleocytoplasmic transport
GO:0050767 P regulation of neurogenesis
GO:0051301 P cell division
6853 O_BomoASG16169_complete:A_BomoASG_c29359_g2_i3
147bp
6854 O_BomoASG1616_complete:A_BomoASG_c10039_g1_i1
100bp
6855 O_BomoASG16170_complete:A_BomoASG_c29360_g2_i1
266bp
 uncharacterized_protein_LOC101738890_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
6856 O_BomoASG16171_3prime_partial:A_BomoASG_c29360_g2_i1
234bp
 uncharacterized_protein_LOC105841624_isoform_X1_[Bombyx_mori]
6857 O_BomoASG16172_complete:A_BomoASG_c29360_g2_i1
164bp
 uncharacterized_protein_LOC110383276_[Helicoverpa_armigera]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
6858 O_BomoASG16173_3prime_partial:A_BomoASG_c29360_g2_i2
234bp
 uncharacterized_protein_LOC105841624_isoform_X1_[Bombyx_mori]
6859 O_BomoASG16174_complete:A_BomoASG_c29363_g1_i1
575bp
 tyrosine-protein_kinase_shark_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
6860 O_BomoASG16175_complete:A_BomoASG_c29363_g1_i1
135bp
6861 O_BomoASG16176_complete:A_BomoASG_c29363_g1_i1
125bp
6862 O_BomoASG16177_complete:A_BomoASG_c29363_g1_i2
804bp
 tyrosine-protein_kinase_shark_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
6863 O_BomoASG16178_complete:A_BomoASG_c29363_g1_i2
135bp
6864 O_BomoASG16179_complete:A_BomoASG_c29363_g1_i2
125bp
6865 O_BomoASG1617_5prime_partial:A_BomoASG_c10053_g1_i1
123bp
6866 O_BomoASG16180_complete:A_BomoASG_c29363_g1_i3
785bp
 tyrosine-protein_kinase_shark_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
6867 O_BomoASG16181_complete:A_BomoASG_c29363_g1_i3
135bp
6868 O_BomoASG16182_complete:A_BomoASG_c29363_g1_i3
125bp
6869 O_BomoASG16183_complete:A_BomoASG_c29363_g1_i4
575bp
 tyrosine-protein_kinase_shark_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
6870 O_BomoASG16184_complete:A_BomoASG_c29363_g1_i4
135bp
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