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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6181 O_BomoASG15564_3prime_partial:A_BomoASG_c29142_g1_i3
518bp
 E3_ubiquitin-protein_ligase_TRIP12_isoform_X4_[Bombyx_mori]
6182 O_BomoASG15565_complete:A_BomoASG_c29143_g1_i1
521bp
 embryonic_polarity_protein_dorsal_isoform_A_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001715 P ectodermal cell fate specification
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006952 P defense response
GO:0006954 P inflammatory response
GO:0006955 P immune response
GO:0006964 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
GO:0007398 P ectoderm development
GO:0007419 P ventral cord development
GO:0007498 P mesoderm development
GO:0007501 P mesodermal cell fate specification
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0008354 P germ cell migration
GO:0008358 P maternal determination of anterior/posterior axis, embryo
GO:0009950 P dorsal/ventral axis specification
GO:0009952 P anterior/posterior pattern specification
GO:0009953 P dorsal/ventral pattern formation
GO:0010004 P gastrulation involving germ band extension
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0016015 F morphogen activity
GO:0031594 C neuromuscular junction
GO:0033256 C I-kappaB/NF-kappaB complex
GO:0034097 P response to cytokine
GO:0035006 P melanization defense response
GO:0035206 P regulation of hemocyte proliferation
GO:0038061 P NIK/NF-kappaB signaling
GO:0042387 P plasmatocyte differentiation
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048935 P peripheral nervous system neuron development
GO:0070379 F high mobility group box 1 binding
GO:0070491 F DNA-binding transcription factor binding
6183 O_BomoASG15566_complete:A_BomoASG_c29143_g1_i1
186bp
6184 O_BomoASG15567_complete:A_BomoASG_c29143_g1_i1
137bp
 hypothetical_protein_A2511_13515_[Deltaproteobacteria_bacterium_RIFOXYD12_FULL_50_9]
6185 O_BomoASG15568_complete:A_BomoASG_c29143_g1_i1
124bp
6186 O_BomoASG15569_complete:A_BomoASG_c29143_g1_i1
113bp
6187 O_BomoASG1556_internal:A_BomoASG_c9587_g1_i1
140bp
 LOW_QUALITY_PROTEIN:_protein_sidekick_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042675 P compound eye cone cell differentiation
GO:0046533 P negative regulation of photoreceptor cell differentiation
GO:0050931 P pigment cell differentiation
GO:0098595 C perivitelline space
6188 O_BomoASG15570_complete:A_BomoASG_c29143_g1_i2
573bp
 embryonic_polarity_protein_dorsal_isoform_B_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001715 P ectodermal cell fate specification
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006952 P defense response
GO:0006954 P inflammatory response
GO:0006955 P immune response
GO:0006964 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
GO:0007398 P ectoderm development
GO:0007419 P ventral cord development
GO:0007498 P mesoderm development
GO:0007501 P mesodermal cell fate specification
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0008354 P germ cell migration
GO:0008358 P maternal determination of anterior/posterior axis, embryo
GO:0009950 P dorsal/ventral axis specification
GO:0009952 P anterior/posterior pattern specification
GO:0009953 P dorsal/ventral pattern formation
GO:0010004 P gastrulation involving germ band extension
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0016015 F morphogen activity
GO:0031594 C neuromuscular junction
GO:0033256 C I-kappaB/NF-kappaB complex
GO:0034097 P response to cytokine
GO:0035006 P melanization defense response
GO:0035206 P regulation of hemocyte proliferation
GO:0038061 P NIK/NF-kappaB signaling
GO:0042387 P plasmatocyte differentiation
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048935 P peripheral nervous system neuron development
GO:0070379 F high mobility group box 1 binding
GO:0070491 F DNA-binding transcription factor binding
6189 O_BomoASG15571_complete:A_BomoASG_c29143_g1_i2
186bp
6190 O_BomoASG15572_complete:A_BomoASG_c29143_g1_i2
137bp
 hypothetical_protein_A2511_13515_[Deltaproteobacteria_bacterium_RIFOXYD12_FULL_50_9]
6191 O_BomoASG15573_complete:A_BomoASG_c29143_g1_i2
124bp
6192 O_BomoASG15574_complete:A_BomoASG_c29143_g1_i2
113bp
6193 O_BomoASG15575_internal:A_BomoASG_c29145_g1_i1
143bp
 rho_GTPase-activating_protein_conundrum_isoform_X3_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008360 P regulation of cell shape
GO:0030833 P regulation of actin filament polymerization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:2000145 P regulation of cell motility
6194 O_BomoASG15576_internal:A_BomoASG_c29145_g1_i1
142bp
6195 O_BomoASG15577_internal:A_BomoASG_c29145_g1_i2
252bp
 rho_GTPase-activating_protein_conundrum_isoform_X3_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008360 P regulation of cell shape
GO:0030833 P regulation of actin filament polymerization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:2000145 P regulation of cell motility
6196 O_BomoASG15578_3prime_partial:A_BomoASG_c29146_g1_i1
142bp
 putative_gamma-glutamylcyclotransferase_CG2811_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
6197 O_BomoASG15579_3prime_partial:A_BomoASG_c29146_g1_i2
142bp
 putative_gamma-glutamylcyclotransferase_CG2811_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
6198 O_BomoASG1557_5prime_partial:A_BomoASG_c9592_g1_i1
299bp
 uncharacterized_protein_LOC101744659_[Bombyx_mori]
GO:0000323 C lytic vacuole
GO:0005537 F mannose binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015578 F mannose transmembrane transporter activity
GO:0015761 P mannose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033299 P secretion of lysosomal enzymes
GO:0048471 C perinuclear region of cytoplasm
6199 O_BomoASG15580_3prime_partial:A_BomoASG_c29146_g1_i3
153bp
 putative_gamma-glutamylcyclotransferase_CG2811_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
6200 O_BomoASG15581_3prime_partial:A_BomoASG_c29146_g1_i4
200bp
 putative_gamma-glutamylcyclotransferase_CG2811_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
6201 O_BomoASG15582_complete:A_BomoASG_c29146_g1_i5
170bp
 putative_gamma-glutamylcyclotransferase_CG2811_isoform_X4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
6202 O_BomoASG15583_internal:A_BomoASG_c29146_g1_i6
176bp
 putative_gamma-glutamylcyclotransferase_CG2811_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
6203 O_BomoASG15584_complete:A_BomoASG_c29146_g1_i7
172bp
 putative_gamma-glutamylcyclotransferase_CG2811_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
6204 O_BomoASG15585_5prime_partial:A_BomoASG_c29148_g1_i1
202bp
 disintegrin_and_metalloproteinase_domain-containing_protein_10_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0006468 P protein phosphorylation
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0007162 P negative regulation of cell adhesion
GO:0007219 P Notch signaling pathway
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
6205 O_BomoASG15586_3prime_partial:A_BomoASG_c29148_g1_i1
110bp
6206 O_BomoASG15587_complete:A_BomoASG_c29149_g3_i1
200bp
 uncharacterized_protein_LOC101735549_isoform_X1_[Bombyx_mori]
6207 O_BomoASG15588_complete:A_BomoASG_c29149_g3_i2
167bp
 uncharacterized_protein_LOC101735549_isoform_X2_[Bombyx_mori]
6208 O_BomoASG15589_complete:A_BomoASG_c29149_g3_i3
124bp
 uncharacterized_protein_LOC101735549_isoform_X3_[Bombyx_mori]
6209 O_BomoASG1558_internal:A_BomoASG_c9605_g1_i1
124bp
 uncharacterized_protein_LOC105842707_[Bombyx_mori]
6210 O_BomoASG15590_complete:A_BomoASG_c29149_g3_i4
167bp
 uncharacterized_protein_LOC101735549_isoform_X2_[Bombyx_mori]
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