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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
61 O_BomoASG10055_3prime_partial:A_BomoASG_c26029_g2_i2
129bp
62 O_BomoASG10056_5prime_partial:A_BomoASG_c26029_g2_i3
128bp
 SET_and_MYND_domain-containing_protein_4_[Bombyx_mori]
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
63 O_BomoASG10057_3prime_partial:A_BomoASG_c26030_g1_i1
249bp
 beta-TrCP_isoform_X2_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0006470 P protein dephosphorylation
GO:0007049 P cell cycle
GO:0016055 P Wnt signaling pathway
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031648 P protein destabilization
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0042752 P regulation of circadian rhythm
GO:0042753 P positive regulation of circadian rhythm
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045862 P positive regulation of proteolysis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046983 F protein dimerization activity
GO:0048511 P rhythmic process
GO:0061630 F ubiquitin protein ligase activity
64 O_BomoASG10058_internal:A_BomoASG_c26033_g1_i2
199bp
 uncharacterized_protein_LOC101745257_isoform_X1_[Bombyx_mori]
65 O_BomoASG10059_3prime_partial:A_BomoASG_c26035_g1_i2
240bp
 E3_ubiquitin-protein_ligase_RFWD2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0010212 P response to ionizing radiation
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
66 O_BomoASG1005_5prime_partial:A_BomoASG_c6372_g1_i1
129bp
 fatty_acyl-CoA_reductase_wat_isoform_X2_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005782 C peroxisomal matrix
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
67 O_BomoASG10060_5prime_partial:A_BomoASG_c26035_g1_i2
188bp
68 O_BomoASG10061_3prime_partial:A_BomoASG_c26037_g1_i1
233bp
 leucine-rich_repeat-containing_protein_57-like_[Bombyx_mori]
GO:0016020 C membrane
GO:0070062 C extracellular exosome
69 O_BomoASG10062_3prime_partial:A_BomoASG_c26039_g1_i1
102bp
 acetylcholinesterase_2,_partial_[Bombyx_mori]
GO:0001507 P acetylcholine catabolic process in synaptic cleft
GO:0003990 F acetylcholinesterase activity
GO:0004104 F cholinesterase activity
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0031225 C anchored component of membrane
GO:0042135 P neurotransmitter catabolic process
GO:0043083 C synaptic cleft
GO:0045202 C synapse
GO:0052689 F carboxylic ester hydrolase activity
70 O_BomoASG10063_internal:A_BomoASG_c26039_g1_i2
109bp
 acetylcholinesterase_2,_partial_[Bombyx_mori]
GO:0001507 P acetylcholine catabolic process in synaptic cleft
GO:0003990 F acetylcholinesterase activity
GO:0004104 F cholinesterase activity
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0031225 C anchored component of membrane
GO:0042135 P neurotransmitter catabolic process
GO:0043083 C synaptic cleft
GO:0045202 C synapse
GO:0052689 F carboxylic ester hydrolase activity
71 O_BomoASG10064_internal:A_BomoASG_c26041_g1_i1
535bp
 LOW_QUALITY_PROTEIN:_mediator_of_RNA_polymerase_II_transcription_subunit_23_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
72 O_BomoASG10065_3prime_partial:A_BomoASG_c26042_g1_i1
1660bp
 ATP-dependent_helicase_brm_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003713 F transcription coactivator activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007409 P axonogenesis
GO:0007419 P ventral cord development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007517 P muscle organ development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0022008 P neurogenesis
GO:0035060 C brahma complex
GO:0035172 P hemocyte proliferation
GO:0035329 P hippo signaling
GO:0036335 P intestinal stem cell homeostasis
GO:0042393 F histone binding
GO:0043044 P chromatin remodeling
GO:0043974 P histone H3-K27 acetylation
GO:0045088 P regulation of innate immune response
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070604 C RSC-type complex
GO:0070983 P dendrite guidance
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
GO:2000648 P positive regulation of stem cell proliferation
73 O_BomoASG10066_complete:A_BomoASG_c26042_g1_i1
118bp
74 O_BomoASG10067_complete:A_BomoASG_c26042_g1_i1
113bp
75 O_BomoASG10068_complete:A_BomoASG_c26042_g1_i1
112bp
76 O_BomoASG10069_complete:A_BomoASG_c26042_g1_i1
100bp
77 O_BomoASG1006_internal:A_BomoASG_c6376_g1_i1
154bp
 glucosidase_precursor_[Bombyx_mori]
GO:0000016 F lactase activity
GO:0001666 P response to hypoxia
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005903 C brush border
GO:0005975 P carbohydrate metabolic process
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0008422 F beta-glucosidase activity
GO:0009725 P response to hormone
GO:0009744 P response to sucrose
GO:0010033 P response to organic substance
GO:0010040 P response to iron(II) ion
GO:0010045 P response to nickel cation
GO:0010288 P response to lead ion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0017042 F glycosylceramidase activity
GO:0042493 P response to xenobiotic stimulus
GO:0042594 P response to starvation
GO:0043627 P response to estrogen
GO:0045471 P response to ethanol
GO:1901657 P glycosyl compound metabolic process
78 O_BomoASG10070_internal:A_BomoASG_c26042_g1_i2
1418bp
 ATP-dependent_helicase_brm_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003713 F transcription coactivator activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007409 P axonogenesis
GO:0007419 P ventral cord development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007517 P muscle organ development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0022008 P neurogenesis
GO:0035060 C brahma complex
GO:0035172 P hemocyte proliferation
GO:0035329 P hippo signaling
GO:0036335 P intestinal stem cell homeostasis
GO:0042393 F histone binding
GO:0043044 P chromatin remodeling
GO:0043974 P histone H3-K27 acetylation
GO:0045088 P regulation of innate immune response
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070604 C RSC-type complex
GO:0070983 P dendrite guidance
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
GO:2000648 P positive regulation of stem cell proliferation
79 O_BomoASG10071_complete:A_BomoASG_c26042_g1_i2
118bp
80 O_BomoASG10072_complete:A_BomoASG_c26042_g1_i2
113bp
81 O_BomoASG10073_complete:A_BomoASG_c26042_g1_i2
100bp
82 O_BomoASG10074_internal:A_BomoASG_c26046_g1_i1
347bp
 nucleosome-remodeling_factor_subunit_NURF301_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016589 C NURF complex
GO:0016922 F nuclear receptor binding
GO:0019233 P sensory perception of pain
GO:0030097 P hemopoiesis
GO:0035064 F methylated histone binding
GO:0035073 P pupariation
GO:0035076 P ecdysone receptor-mediated signaling pathway
GO:0042766 P nucleosome mobilization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045824 P negative regulation of innate immune response
GO:0046331 P lateral inhibition
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0046872 F metal ion binding
GO:0048515 P spermatid differentiation
GO:0048813 P dendrite morphogenesis
GO:0070577 F lysine-acetylated histone binding
GO:0070615 F ATP-dependent chromatin remodeler activity
83 O_BomoASG10075_3prime_partial:A_BomoASG_c26047_g1_i1
986bp
 putative_leucine-rich_repeat-containing_protein_DDB_G0290503_isoform_X1_[Bombyx_mori]
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016605 C PML body
GO:0016607 C nuclear speck
GO:0030014 C CCR4-NOT complex
GO:0033962 P P-body assembly
84 O_BomoASG10076_complete:A_BomoASG_c26047_g1_i1
113bp
85 O_BomoASG10077_3prime_partial:A_BomoASG_c26048_g1_i1
139bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
86 O_BomoASG10078_internal:A_BomoASG_c26049_g1_i1
309bp
 glyoxylate_reductase/hydroxypyruvate_reductase_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0007588 P excretion
GO:0008152 P metabolic process
GO:0008465 F glycerate dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016618 F hydroxypyruvate reductase activity
GO:0030267 F glyoxylate reductase (NADP+) activity
GO:0031406 F carboxylic acid binding
GO:0042803 F protein homodimerization activity
GO:0043648 P dicarboxylic acid metabolic process
GO:0046487 P glyoxylate metabolic process
GO:0050661 F NADP binding
GO:0051259 P protein complex oligomerization
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070402 F NADPH binding
87 O_BomoASG10079_complete:A_BomoASG_c26050_g1_i1
213bp
 vegetative_cell_wall_protein_gp1-like_isoform_X1_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005044 F scavenger receptor activity
GO:0006508 P proteolysis
GO:0006898 P receptor-mediated endocytosis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0072562 C blood microparticle
88 O_BomoASG1007_3prime_partial:A_BomoASG_c6386_g1_i1
258bp
 rab_GTPase-binding_effector_protein_1_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0008083 F growth factor activity
GO:0015031 P protein transport
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0030139 C endocytic vesicle
GO:0031410 C cytoplasmic vesicle
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043547 P positive regulation of GTPase activity
GO:0055037 C recycling endosome
GO:0061025 P membrane fusion
89 O_BomoASG10080_complete:A_BomoASG_c26050_g2_i1
238bp
 PREDICTED:_uncharacterized_protein_LOC108759490_[Trachymyrmex_cornetzi]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0032502 P developmental process
90 O_BomoASG10081_complete:A_BomoASG_c26050_g2_i2
135bp
 PREDICTED:_uncharacterized_protein_LOC108759490_[Trachymyrmex_cornetzi]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0032502 P developmental process
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