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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
31 O_BomoASG10028_complete:A_BomoASG_c26010_g1_i1
240bp
 protein_SDE2_homolog_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
32 O_BomoASG10029_5prime_partial:A_BomoASG_c26013_g1_i1
501bp
 EGF_domain-specific_O-linked_N-acetylglucosamine_transferase_isoform_X1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006493 P protein O-linked glycosylation
GO:0008152 P metabolic process
GO:0008363 P larval chitin-based cuticle development
GO:0016262 F protein N-acetylglucosaminyltransferase activity
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0097363 F protein O-GlcNAc transferase activity
GO:0097370 P protein O-GlcNAcylation via threonine
33 O_BomoASG1002_3prime_partial:A_BomoASG_c6360_g1_i1
140bp
34 O_BomoASG10030_5prime_partial:A_BomoASG_c26016_g1_i1
204bp
 tubby-related_protein_4_[Bombyx_mori]
GO:0003700 F DNA-binding transcription factor activity
GO:0005737 C cytoplasm
GO:0005929 C cilium
GO:0006355 P regulation of transcription, DNA-templated
GO:0016567 P protein ubiquitination
GO:0035091 F phosphatidylinositol binding
GO:0035556 P intracellular signal transduction
GO:0061512 P protein localization to cilium
35 O_BomoASG10031_complete:A_BomoASG_c26019_g1_i1
363bp
 solute_carrier_family_35_member_F6_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
GO:1901029 P negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway
36 O_BomoASG10032_complete:A_BomoASG_c26019_g1_i1
113bp
37 O_BomoASG10033_complete:A_BomoASG_c26020_g2_i1
732bp
 NADH-ubiquinone_oxidoreductase_75_kDa_subunit,_mitochondrial_[Bombyx_mori]
GO:0003954 F NADH dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0019233 P sensory perception of pain
GO:0042773 P ATP synthesis coupled electron transport
GO:0045333 P cellular respiration
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
GO:0072593 P reactive oxygen species metabolic process
38 O_BomoASG10034_complete:A_BomoASG_c26020_g2_i1
188bp
39 O_BomoASG10035_complete:A_BomoASG_c26020_g3_i1
359bp
 activating_signal_cointegrator_1_complex_subunit_1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
40 O_BomoASG10036_5prime_partial:A_BomoASG_c26020_g3_i1
116bp
41 O_BomoASG10037_5prime_partial:A_BomoASG_c26020_g2_i2
742bp
 NADH-ubiquinone_oxidoreductase_75_kDa_subunit,_mitochondrial_[Bombyx_mori]
GO:0003954 F NADH dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0019233 P sensory perception of pain
GO:0042773 P ATP synthesis coupled electron transport
GO:0045333 P cellular respiration
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
GO:0072593 P reactive oxygen species metabolic process
42 O_BomoASG10038_complete:A_BomoASG_c26020_g2_i2
188bp
43 O_BomoASG10039_internal:A_BomoASG_c26021_g1_i1
134bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
44 O_BomoASG1003_complete:A_BomoASG_c6362_g1_i1
437bp
 proton-coupled_amino_acid_transporter-like_protein_pathetic_isoform_X1_[Bombyx_mori]
GO:0005280 F amino acid:proton symporter activity
GO:0005302 F L-tyrosine transmembrane transporter activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015078 F proton transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015187 F glycine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015804 P neutral amino acid transport
GO:0015808 P L-alanine transport
GO:0015816 P glycine transport
GO:0015824 P proline transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
GO:1902600 P proton transmembrane transport
45 O_BomoASG10040_internal:A_BomoASG_c26024_g1_i2
150bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X4_[Papilio_machaon]
46 O_BomoASG10041_3prime_partial:A_BomoASG_c26025_g1_i1
480bp
 E3_ubiquitin-protein_ligase_TRIM33_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
47 O_BomoASG10042_5prime_partial:A_BomoASG_c26025_g1_i1
175bp
48 O_BomoASG10043_internal:A_BomoASG_c26025_g1_i2
164bp
49 O_BomoASG10044_internal:A_BomoASG_c26025_g1_i2
163bp
 E3_ubiquitin-protein_ligase_TRIM33_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030218 P erythrocyte differentiation
GO:0033333 P fin development
GO:0034243 P regulation of transcription elongation from RNA polymerase II promoter
GO:0035162 P embryonic hemopoiesis
GO:0035166 P post-embryonic hemopoiesis
GO:0046872 F metal ion binding
GO:0060215 P primitive hemopoiesis
50 O_BomoASG10045_3prime_partial:A_BomoASG_c26026_g1_i1
222bp
 beta-chimaerin_[Bombyx_mori]
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0008045 P motor neuron axon guidance
GO:0009967 P positive regulation of signal transduction
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:0050770 P regulation of axonogenesis
GO:0051056 P regulation of small GTPase mediated signal transduction
51 O_BomoASG10046_5prime_partial:A_BomoASG_c26027_g1_i1
197bp
 cyclin-J_[Bombyx_mori]
52 O_BomoASG10047_internal:A_BomoASG_c26028_g1_i1
401bp
 zinc_finger_SWIM_domain-containing_protein_8_isoform_X2_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
53 O_BomoASG10048_complete:A_BomoASG_c26028_g1_i1
114bp
54 O_BomoASG10049_5prime_partial:A_BomoASG_c26028_g1_i1
109bp
55 O_BomoASG1004_internal:A_BomoASG_c6371_g1_i1
124bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
56 O_BomoASG10050_internal:A_BomoASG_c26029_g1_i1
294bp
 SET_and_MYND_domain-containing_protein_4_[Bombyx_mori]
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
57 O_BomoASG10051_5prime_partial:A_BomoASG_c26029_g1_i1
124bp
58 O_BomoASG10052_internal:A_BomoASG_c26029_g2_i1
111bp
59 O_BomoASG10053_5prime_partial:A_BomoASG_c26029_g2_i1
104bp
 SET_and_MYND_domain-containing_protein_4_[Bombyx_mori]
60 O_BomoASG10054_5prime_partial:A_BomoASG_c26029_g2_i2
217bp
 SET_and_MYND_domain-containing_protein_4_[Bombyx_mori]
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
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