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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6001 O_BomoASG15401_complete:A_BomoASG_c29069_g1_i1
113bp
6002 O_BomoASG15402_3prime_partial:A_BomoASG_c29070_g1_i1
214bp
 actin-related_protein_10_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0007018 P microtubule-based movement
6003 O_BomoASG15403_5prime_partial:A_BomoASG_c29070_g1_i1
103bp
6004 O_BomoASG15404_5prime_partial:A_BomoASG_c29070_g1_i2
146bp
6005 O_BomoASG15405_5prime_partial:A_BomoASG_c29070_g1_i3
146bp
6006 O_BomoASG15406_3prime_partial:A_BomoASG_c29070_g1_i4
115bp
6007 O_BomoASG15407_5prime_partial:A_BomoASG_c29070_g1_i4
102bp
6008 O_BomoASG15408_complete:A_BomoASG_c29073_g1_i1
231bp
 uncharacterized_protein_LOC101737690_[Bombyx_mori]
6009 O_BomoASG15409_complete:A_BomoASG_c29073_g1_i1
121bp
6010 O_BomoASG1540_internal:A_BomoASG_c9544_g1_i1
136bp
 LOW_QUALITY_PROTEIN:_dynein_heavy_chain_8,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0030286 C dynein complex
GO:0031514 C motile cilium
GO:0036157 C outer dynein arm
GO:0042995 C cell projection
GO:0097228 C sperm principal piece
6011 O_BomoASG15410_complete:A_BomoASG_c29074_g1_i1
223bp
 ras-related_protein_Rab-39B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0031489 F myosin V binding
GO:0031982 C vesicle
GO:0043005 C neuron projection
GO:0050808 P synapse organization
6012 O_BomoASG15411_5prime_partial:A_BomoASG_c29074_g1_i2
165bp
 ras-related_protein_Rab-39B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005764 C lysosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0006914 P autophagy
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045335 C phagocytic vesicle
GO:0090383 P phagosome acidification
GO:0090385 P phagosome-lysosome fusion
6013 O_BomoASG15412_complete:A_BomoASG_c29076_g1_i1
143bp
 Uncharacterized_protein_OBRU01_22790_[Operophtera_brumata]
6014 O_BomoASG15413_5prime_partial:A_BomoASG_c29078_g1_i1
280bp
 uncharacterized_protein_LOC110386479_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
6015 O_BomoASG15414_complete:A_BomoASG_c29078_g1_i1
111bp
6016 O_BomoASG15415_3prime_partial:A_BomoASG_c29080_g1_i1
509bp
 PREDICTED:_E2/E3_hybrid_ubiquitin-protein_ligase_UBE2O_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006513 P protein monoubiquitination
GO:0006810 P transport
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0030513 P positive regulation of BMP signaling pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0042147 P retrograde transport, endosome to Golgi
GO:0044822 F RNA binding
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070534 P protein K63-linked ubiquitination
6017 O_BomoASG15416_5prime_partial:A_BomoASG_c29080_g1_i1
107bp
6018 O_BomoASG15417_3prime_partial:A_BomoASG_c29082_g1_i1
295bp
 probable_tRNA_N6-adenosine_threonylcarbamoyltransferase,_mitochondrial_[Bombyx_mori]
GO:0000408 C EKC/KEOPS complex
GO:0002949 P tRNA threonylcarbamoyladenosine modification
GO:0004222 F metalloendopeptidase activity
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008033 P tRNA processing
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0046872 F metal ion binding
GO:0061711 F N(6)-L-threonylcarbamoyladenine synthase activity
6019 O_BomoASG15418_complete:A_BomoASG_c29083_g1_i2
676bp
 sodium/hydrogen_exchanger_7_isoform_X1_[Helicoverpa_armigera]
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0006885 P regulation of pH
GO:0015297 F antiporter activity
GO:0015299 F solute:proton antiporter activity
GO:0015385 F sodium:proton antiporter activity
GO:0015386 F potassium:proton antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035725 P sodium ion transmembrane transport
GO:0055038 C recycling endosome membrane
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
GO:1902600 P proton transmembrane transport
6020 O_BomoASG15419_complete:A_BomoASG_c29083_g1_i2
121bp
6021 O_BomoASG1541_internal:A_BomoASG_c9545_g1_i2
213bp
 acyl-CoA_synthetase_family_member_2,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
6022 O_BomoASG15420_complete:A_BomoASG_c29083_g1_i3
641bp
 sodium/hydrogen_exchanger_7_isoform_X6_[Helicoverpa_armigera]
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0006885 P regulation of pH
GO:0015297 F antiporter activity
GO:0015299 F solute:proton antiporter activity
GO:0015385 F sodium:proton antiporter activity
GO:0015386 F potassium:proton antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035725 P sodium ion transmembrane transport
GO:0055038 C recycling endosome membrane
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
GO:1902600 P proton transmembrane transport
6023 O_BomoASG15421_complete:A_BomoASG_c29083_g1_i3
121bp
6024 O_BomoASG15422_complete:A_BomoASG_c29083_g1_i4
666bp
 sodium/hydrogen_exchanger_7_isoform_X3_[Helicoverpa_armigera]
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0006885 P regulation of pH
GO:0015297 F antiporter activity
GO:0015299 F solute:proton antiporter activity
GO:0015385 F sodium:proton antiporter activity
GO:0015386 F potassium:proton antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035725 P sodium ion transmembrane transport
GO:0055038 C recycling endosome membrane
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
GO:1902600 P proton transmembrane transport
6025 O_BomoASG15423_complete:A_BomoASG_c29083_g1_i4
121bp
6026 O_BomoASG15424_complete:A_BomoASG_c29083_g1_i5
651bp
 sodium/hydrogen_exchanger_7_isoform_X5_[Helicoverpa_armigera]
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0006885 P regulation of pH
GO:0015297 F antiporter activity
GO:0015299 F solute:proton antiporter activity
GO:0015385 F sodium:proton antiporter activity
GO:0015386 F potassium:proton antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035725 P sodium ion transmembrane transport
GO:0055038 C recycling endosome membrane
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
GO:1902600 P proton transmembrane transport
6027 O_BomoASG15425_complete:A_BomoASG_c29083_g1_i5
121bp
6028 O_BomoASG15426_3prime_partial:A_BomoASG_c29084_g1_i1
271bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
6029 O_BomoASG15427_5prime_partial:A_BomoASG_c29084_g1_i1
134bp
 PREDICTED:_uncharacterized_protein_LOC106718363_[Papilio_machaon]
GO:0046872 F metal ion binding
6030 O_BomoASG15428_complete:A_BomoASG_c29084_g1_i1
112bp
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