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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5851 O_BomoASG15267_5prime_partial:A_BomoASG_c29001_g1_i1
1123bp
 protein_brunelleschi_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000916 P actomyosin contractile ring contraction
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007112 P male meiosis cytokinesis
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030008 C TRAPP complex
GO:0036063 C acroblast
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0048137 P spermatocyte division
5852 O_BomoASG15268_complete:A_BomoASG_c29001_g1_i2
1333bp
 protein_brunelleschi_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000916 P actomyosin contractile ring contraction
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007112 P male meiosis cytokinesis
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030008 C TRAPP complex
GO:0036063 C acroblast
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0048137 P spermatocyte division
5853 O_BomoASG15269_complete:A_BomoASG_c29001_g1_i2
104bp
5854 O_BomoASG1526_internal:A_BomoASG_c9457_g1_i1
326bp
 uncharacterized_protein_LOC105842954_[Bombyx_mori]
5855 O_BomoASG15270_internal:A_BomoASG_c29002_g1_i1
407bp
 serine--tRNA_ligase,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004828 F serine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006434 P seryl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0044822 F RNA binding
GO:0097056 P selenocysteinyl-tRNA(Sec) biosynthetic process
5856 O_BomoASG15271_complete:A_BomoASG_c29003_g1_i1
121bp
 uncharacterized_protein_LOC105842659_[Bombyx_mori]
5857 O_BomoASG15272_5prime_partial:A_BomoASG_c29003_g1_i2
229bp
 craniofacial_development_protein_2-like_[Bombyx_mori]
5858 O_BomoASG15273_5prime_partial:A_BomoASG_c29003_g3_i1
105bp
 craniofacial_development_protein_2-like_[Helicoverpa_armigera]
5859 O_BomoASG15274_5prime_partial:A_BomoASG_c29003_g3_i2
101bp
 craniofacial_development_protein_2-like_[Helicoverpa_armigera]
5860 O_BomoASG15275_5prime_partial:A_BomoASG_c29004_g1_i1
554bp
 putative_fatty_acyl-CoA_reductase_CG5065_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
5861 O_BomoASG15276_complete:A_BomoASG_c29004_g1_i1
152bp
5862 O_BomoASG15277_complete:A_BomoASG_c29004_g1_i1
144bp
5863 O_BomoASG15278_complete:A_BomoASG_c29004_g1_i1
139bp
5864 O_BomoASG15279_5prime_partial:A_BomoASG_c29004_g1_i1
106bp
5865 O_BomoASG1527_5prime_partial:A_BomoASG_c9457_g1_i1
100bp
5866 O_BomoASG15280_5prime_partial:A_BomoASG_c29004_g1_i2
322bp
 putative_fatty_acyl-CoA_reductase_CG5065_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
5867 O_BomoASG15281_complete:A_BomoASG_c29004_g1_i2
144bp
5868 O_BomoASG15282_3prime_partial:A_BomoASG_c29006_g1_i1
1946bp
 LOW_QUALITY_PROTEIN:_protein_split_ends_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
5869 O_BomoASG15283_complete:A_BomoASG_c29006_g1_i1
243bp
5870 O_BomoASG15284_complete:A_BomoASG_c29006_g1_i1
168bp
5871 O_BomoASG15285_complete:A_BomoASG_c29006_g1_i1
114bp
5872 O_BomoASG15286_complete:A_BomoASG_c29006_g1_i1
106bp
5873 O_BomoASG15287_complete:A_BomoASG_c29006_g1_i1
105bp
5874 O_BomoASG15288_5prime_partial:A_BomoASG_c29008_g1_i1
649bp
 LOW_QUALITY_PROTEIN:_ATP-dependent_RNA_helicase_DHX8_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
5875 O_BomoASG15289_5prime_partial:A_BomoASG_c29008_g1_i1
214bp
 hypothetical_protein_D910_00434,_partial_[Dendroctonus_ponderosae]
5876 O_BomoASG1528_internal:A_BomoASG_c9462_g1_i1
323bp
 dual_specificity_protein_kinase_KNS1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0008380 P RNA splicing
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
5877 O_BomoASG15290_5prime_partial:A_BomoASG_c29008_g1_i2
1292bp
 LOW_QUALITY_PROTEIN:_ATP-dependent_RNA_helicase_DHX8_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
5878 O_BomoASG15291_complete:A_BomoASG_c29008_g1_i3
1315bp
 LOW_QUALITY_PROTEIN:_ATP-dependent_RNA_helicase_DHX8_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
5879 O_BomoASG15292_complete:A_BomoASG_c29008_g1_i3
122bp
5880 O_BomoASG15293_internal:A_BomoASG_c29010_g1_i1
292bp
 DNA_polymerase_iota_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019985 P translesion synthesis
GO:0042276 P error-prone translesion synthesis
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
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