SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/32479
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5731 O_BomoASG15159_3prime_partial:A_BomoASG_c28955_g2_i2
444bp
 PREDICTED:_zinc_finger_protein_660-like_isoform_X6_[Papilio_machaon]
GO:0001223 F transcription coactivator binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008134 F transcription factor binding
GO:0008285 P negative regulation of cell population proliferation
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
5732 O_BomoASG1515_internal:A_BomoASG_c9411_g1_i1
152bp
 PREDICTED:_uncharacterized_protein_LOC106719761_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
5733 O_BomoASG15160_complete:A_BomoASG_c28956_g1_i1
302bp
 uncharacterized_protein_LOC101741560_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
5734 O_BomoASG15161_complete:A_BomoASG_c28956_g1_i2
181bp
 uncharacterized_protein_LOC101741560_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
5735 O_BomoASG15162_5prime_partial:A_BomoASG_c28957_g1_i1
258bp
 testis-expressed_protein_2-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0006665 P sphingolipid metabolic process
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5736 O_BomoASG15163_3prime_partial:A_BomoASG_c28961_g1_i1
384bp
 mkk7_[Danaus_plexippus_plexippus]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0001934 P positive regulation of protein phosphorylation
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004708 F MAP kinase kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006970 P response to osmotic stress
GO:0007165 P signal transduction
GO:0007254 P JNK cascade
GO:0007257 P obsolete activation of JUN kinase activity
GO:0008022 F protein C-terminus binding
GO:0008545 F JUN kinase kinase activity
GO:0009408 P response to heat
GO:0009411 P response to UV
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0019903 F protein phosphatase binding
GO:0031435 F mitogen-activated protein kinase kinase kinase binding
GO:0032212 P positive regulation of telomere maintenance via telomerase
GO:0034612 P response to tumor necrosis factor
GO:0035897 P obsolete proteolysis in other organism
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0043525 P positive regulation of neuron apoptotic process
GO:0046872 F metal ion binding
GO:0051403 P stress-activated MAPK cascade
GO:0051973 P positive regulation of telomerase activity
GO:0072709 P cellular response to sorbitol
GO:1904355 P positive regulation of telomere capping
5737 O_BomoASG15164_5prime_partial:A_BomoASG_c28963_g2_i1
273bp
 limbic_system-associated_membrane_protein_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0008150 P biological_process
GO:0030054 C cell junction
GO:0050896 P response to stimulus
5738 O_BomoASG15165_complete:A_BomoASG_c28963_g2_i2
486bp
 limbic_system-associated_membrane_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0007424 P open tracheal system development
GO:0016020 C membrane
GO:0016331 P morphogenesis of embryonic epithelium
GO:0019898 C extrinsic component of membrane
GO:0019991 P septate junction assembly
GO:0031225 C anchored component of membrane
GO:0035151 P regulation of tube size, open tracheal system
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0042803 F protein homodimerization activity
GO:0061343 P cell adhesion involved in heart morphogenesis
5739 O_BomoASG15166_5prime_partial:A_BomoASG_c28964_g1_i4
205bp
 PREDICTED:_uncharacterized_protein_LOC108767548_[Trachymyrmex_cornetzi]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
5740 O_BomoASG15167_complete:A_BomoASG_c28966_g1_i1
331bp
 fumarylacetoacetase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
5741 O_BomoASG15168_complete:A_BomoASG_c28966_g1_i1
170bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
5742 O_BomoASG15169_internal:A_BomoASG_c28967_g1_i1
524bp
 mucin-2_[Bombyx_mori]
5743 O_BomoASG1516_5prime_partial:A_BomoASG_c9416_g1_i1
132bp
 uncharacterized_protein_LOC101745807_[Bombyx_mori]
5744 O_BomoASG15170_internal:A_BomoASG_c28967_g1_i2
453bp
 mucin-2_[Bombyx_mori]
5745 O_BomoASG15171_internal:A_BomoASG_c28967_g1_i3
284bp
 mucin-2_[Bombyx_mori]
5746 O_BomoASG15172_internal:A_BomoASG_c28967_g2_i1
225bp
 oviduct-specific_glycoprotein_[Bombyx_mori]
5747 O_BomoASG15173_complete:A_BomoASG_c28967_g2_i1
103bp
5748 O_BomoASG15174_5prime_partial:A_BomoASG_c28968_g1_i1
323bp
 transcriptional_activator_protein_Pur-alpha_isoform_X4_[Bombyx_mori]
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003691 F double-stranded telomeric DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005737 C cytoplasm
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007399 P nervous system development
GO:0008134 F transcription factor binding
GO:0008283 P cell population proliferation
GO:0008284 P positive regulation of cell population proliferation
GO:0017148 P negative regulation of translation
GO:0030154 P cell differentiation
GO:0030425 C dendrite
GO:0032422 F purine-rich negative regulatory element binding
GO:0042127 P regulation of cell population proliferation
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046332 F SMAD binding
5749 O_BomoASG15175_complete:A_BomoASG_c28968_g1_i1
159bp
5750 O_BomoASG15176_complete:A_BomoASG_c28968_g1_i2
287bp
 transcriptional_activator_protein_Pur-alpha_isoform_X6_[Bombyx_mori]
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003691 F double-stranded telomeric DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005737 C cytoplasm
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007399 P nervous system development
GO:0008134 F transcription factor binding
GO:0008283 P cell population proliferation
GO:0008284 P positive regulation of cell population proliferation
GO:0017148 P negative regulation of translation
GO:0030154 P cell differentiation
GO:0030425 C dendrite
GO:0032422 F purine-rich negative regulatory element binding
GO:0042127 P regulation of cell population proliferation
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046332 F SMAD binding
5751 O_BomoASG15177_complete:A_BomoASG_c28968_g1_i2
159bp
5752 O_BomoASG15178_5prime_partial:A_BomoASG_c28968_g1_i3
263bp
 transcriptional_activator_protein_Pur-alpha_isoform_X4_[Bombyx_mori]
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003691 F double-stranded telomeric DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005737 C cytoplasm
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007399 P nervous system development
GO:0008134 F transcription factor binding
GO:0008283 P cell population proliferation
GO:0008284 P positive regulation of cell population proliferation
GO:0017148 P negative regulation of translation
GO:0030154 P cell differentiation
GO:0030425 C dendrite
GO:0032422 F purine-rich negative regulatory element binding
GO:0042127 P regulation of cell population proliferation
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046332 F SMAD binding
5753 O_BomoASG15179_complete:A_BomoASG_c28968_g1_i3
159bp
5754 O_BomoASG1517_internal:A_BomoASG_c9422_g1_i1
118bp
 hypothetical_protein_RP20_CCG022329_[Aedes_albopictus]
GO:0001508 P action potential
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005251 F delayed rectifier potassium channel activity
GO:0005267 F potassium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007611 P learning or memory
GO:0007619 P courtship behavior
GO:0007629 P flight behavior
GO:0007637 P proboscis extension reflex
GO:0008076 C voltage-gated potassium channel complex
GO:0008345 P larval locomotory behavior
GO:0009584 P detection of visible light
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022843 F voltage-gated cation channel activity
GO:0030431 P sleep
GO:0034765 P regulation of ion transmembrane transport
GO:0045187 P regulation of circadian sleep/wake cycle, sleep
GO:0048047 P mating behavior, sex discrimination
GO:0048150 P behavioral response to ether
GO:0048675 P axon extension
GO:0050909 P sensory perception of taste
GO:0051260 P protein homooligomerization
GO:0055085 P transmembrane transport
GO:0060025 P regulation of synaptic activity
GO:0071805 P potassium ion transmembrane transport
5755 O_BomoASG15180_complete:A_BomoASG_c28969_g1_i1
465bp
 neuropeptide_receptor_A11_[Bombyx_mori]
GO:0001601 F peptide YY receptor activity
GO:0003151 P outflow tract morphogenesis
GO:0003214 P cardiac left ventricle morphogenesis
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0004983 F neuropeptide Y receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007193 P adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway
GO:0007218 P neuropeptide signaling pathway
GO:0007268 P chemical synaptic transmission
GO:0007631 P feeding behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031513 C non-motile cilium
5756 O_BomoASG15181_3prime_partial:A_BomoASG_c28970_g1_i1
471bp
 LOW_QUALITY_PROTEIN:_type_II_inositol_1,4,5-trisphosphate_5-phosphatase_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0004439 F phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
GO:0004445 F inositol-polyphosphate 5-phosphatase activity
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030317 P flagellated sperm motility
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0046856 P phosphatidylinositol dephosphorylation
GO:0046872 F metal ion binding
GO:0052658 F inositol-1,4,5-trisphosphate 5-phosphatase activity
GO:0070613 P regulation of protein processing
5757 O_BomoASG15182_5prime_partial:A_BomoASG_c28971_g1_i1
731bp
 serine/threonine-protein_kinase_mig-15_isoform_X3_[Bombyx_mori]
GO:0000003 P reproduction
GO:0000166 F nucleotide binding
GO:0002119 P nematode larval development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0010171 P body morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0030334 P regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0033563 P dorsal/ventral axon guidance
GO:0048812 P neuron projection morphogenesis
5758 O_BomoASG15183_complete:A_BomoASG_c28971_g1_i1
108bp
5759 O_BomoASG15184_complete:A_BomoASG_c28971_g1_i2
1061bp
 serine/threonine-protein_kinase_mig-15_isoform_X5_[Bombyx_mori]
GO:0000003 P reproduction
GO:0000166 F nucleotide binding
GO:0002119 P nematode larval development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0010171 P body morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0030334 P regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0033563 P dorsal/ventral axon guidance
GO:0048812 P neuron projection morphogenesis
5760 O_BomoASG15185_complete:A_BomoASG_c28971_g1_i2
121bp
previous next from show/32479

- SilkBase 1999-2023 -