SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/32479
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5701 O_BomoASG15131_5prime_partial:A_BomoASG_c28945_g2_i1
233bp
 intersectin-1_isoform_X4_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0007264 P small GTPase mediated signal transduction
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019209 F kinase activator activity
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0032947 F molecular adaptor activity
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043065 P positive regulation of apoptotic process
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0046872 F metal ion binding
GO:0048013 P ephrin receptor signaling pathway
GO:0048488 P synaptic vesicle endocytosis
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0051897 P positive regulation of protein kinase B signaling
GO:0070064 F proline-rich region binding
5702 O_BomoASG15132_3prime_partial:A_BomoASG_c28945_g2_i1
227bp
 intersectin-1_isoform_X4_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0007264 P small GTPase mediated signal transduction
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019209 F kinase activator activity
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0032947 F molecular adaptor activity
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0046872 F metal ion binding
GO:0048013 P ephrin receptor signaling pathway
GO:0051897 P positive regulation of protein kinase B signaling
GO:0070064 F proline-rich region binding
5703 O_BomoASG15133_5prime_partial:A_BomoASG_c28945_g2_i1
163bp
5704 O_BomoASG15134_5prime_partial:A_BomoASG_c28945_g2_i1
134bp
5705 O_BomoASG15135_complete:A_BomoASG_c28946_g1_i1
136bp
 zinc_finger_CCHC_domain-containing_protein_10_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
5706 O_BomoASG15136_internal:A_BomoASG_c28947_g1_i1
110bp
 zinc_finger_SWIM_domain-containing_protein_4_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
5707 O_BomoASG15137_internal:A_BomoASG_c28947_g1_i1
110bp
5708 O_BomoASG15138_internal:A_BomoASG_c28947_g2_i1
166bp
 zinc_finger_SWIM_domain-containing_protein_4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0048812 P neuron projection morphogenesis
GO:2001222 P regulation of neuron migration
5709 O_BomoASG15139_5prime_partial:A_BomoASG_c28947_g2_i1
160bp
5710 O_BomoASG1513_internal:A_BomoASG_c9398_g1_i1
159bp
 integument_esterase_1_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
5711 O_BomoASG15140_5prime_partial:A_BomoASG_c28947_g2_i1
115bp
5712 O_BomoASG15141_internal:A_BomoASG_c28947_g3_i1
225bp
 zinc_finger_SWIM_domain-containing_protein_4-like_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005615 C extracellular space
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
5713 O_BomoASG15142_5prime_partial:A_BomoASG_c28947_g3_i1
105bp
5714 O_BomoASG15143_complete:A_BomoASG_c28948_g1_i1
471bp
 gastrula_zinc_finger_protein_XlCGF46.1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
5715 O_BomoASG15144_3prime_partial:A_BomoASG_c28950_g1_i1
517bp
 ATP-binding_cassette_sub-family_C_member_Sur_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0005524 F ATP binding
GO:0006031 P chitin biosynthetic process
GO:0006810 P transport
GO:0007507 P heart development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
5716 O_BomoASG15145_5prime_partial:A_BomoASG_c28950_g1_i1
145bp
 ATP-binding_cassette_sub-family_C_member_Sur_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0005524 F ATP binding
GO:0006031 P chitin biosynthetic process
GO:0006810 P transport
GO:0007507 P heart development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
5717 O_BomoASG15146_complete:A_BomoASG_c28950_g1_i1
110bp
5718 O_BomoASG15147_complete:A_BomoASG_c28954_g1_i1
857bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
5719 O_BomoASG15148_complete:A_BomoASG_c28954_g1_i1
250bp
5720 O_BomoASG15149_complete:A_BomoASG_c28954_g1_i1
129bp
5721 O_BomoASG1514_internal:A_BomoASG_c9409_g1_i1
126bp
 phospholipase_C_beta_1_[Bombyx_mori]
GO:0004435 F phosphatidylinositol phospholipase C activity
GO:0004871 F obsolete signal transducer activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005623 C obsolete cell
GO:0006629 P lipid metabolic process
GO:0006651 P diacylglycerol biosynthetic process
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0007165 P signal transduction
GO:0007629 P flight behavior
GO:0008081 F phosphoric diester hydrolase activity
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0035556 P intracellular signal transduction
GO:0070050 P neuron cellular homeostasis
GO:1900073 P regulation of neuromuscular synaptic transmission
5722 O_BomoASG15150_complete:A_BomoASG_c28954_g1_i2
939bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
5723 O_BomoASG15151_complete:A_BomoASG_c28954_g1_i2
250bp
5724 O_BomoASG15152_complete:A_BomoASG_c28954_g1_i2
129bp
5725 O_BomoASG15153_complete:A_BomoASG_c28954_g1_i3
857bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
5726 O_BomoASG15154_complete:A_BomoASG_c28954_g1_i3
250bp
5727 O_BomoASG15155_complete:A_BomoASG_c28954_g1_i3
129bp
5728 O_BomoASG15156_internal:A_BomoASG_c28955_g2_i1
153bp
 zinc_finger_protein_62_homolog_[Bombyx_mori]
5729 O_BomoASG15157_5prime_partial:A_BomoASG_c28955_g3_i1
494bp
 serine/threonine-protein_kinase_RIO1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006364 P rRNA processing
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
5730 O_BomoASG15158_complete:A_BomoASG_c28955_g3_i1
135bp
previous next from show/32479

- SilkBase 1999-2023 -