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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5611 O_BomoASG15050_complete:A_BomoASG_c28903_g1_i3
272bp
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006413 P translational initiation
5612 O_BomoASG15051_complete:A_BomoASG_c28903_g1_i3
232bp
5613 O_BomoASG15052_complete:A_BomoASG_c28903_g1_i3
100bp
5614 O_BomoASG15053_complete:A_BomoASG_c28903_g1_i4
966bp
 basic_salivary_proline-rich_protein_2,_partial_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001106 F transcription corepressor activity
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0015629 C actin cytoskeleton
GO:0044822 F RNA binding
GO:0070064 F proline-rich region binding
5615 O_BomoASG15054_complete:A_BomoASG_c28903_g1_i4
272bp
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006413 P translational initiation
5616 O_BomoASG15055_complete:A_BomoASG_c28903_g1_i4
257bp
5617 O_BomoASG15056_complete:A_BomoASG_c28903_g1_i5
775bp
 basic_salivary_proline-rich_protein_2,_partial_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001106 F transcription corepressor activity
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0015629 C actin cytoskeleton
GO:0044822 F RNA binding
GO:0070064 F proline-rich region binding
5618 O_BomoASG15057_complete:A_BomoASG_c28903_g1_i5
272bp
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006413 P translational initiation
5619 O_BomoASG15058_complete:A_BomoASG_c28903_g1_i5
257bp
5620 O_BomoASG15059_complete:A_BomoASG_c28903_g1_i5
100bp
5621 O_BomoASG1505_complete:A_BomoASG_c9384_g2_i2
105bp
5622 O_BomoASG15060_3prime_partial:A_BomoASG_c28906_g1_i1
402bp
 WD_repeat-containing_protein_19_isoform_X1_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001701 P in utero embryonic development
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0008406 P gonad development
GO:0030030 P cell projection organization
GO:0030326 P embryonic limb morphogenesis
GO:0030991 C intraciliary transport particle A
GO:0031076 P embryonic camera-type eye development
GO:0031513 C non-motile cilium
GO:0031514 C motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042471 P ear morphogenesis
GO:0042995 C cell projection
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0050877 P nervous system process
GO:0055123 P digestive system development
GO:0060271 P cilium assembly
GO:0060830 P ciliary receptor clustering involved in smoothened signaling pathway
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0061055 P myotome development
GO:0061512 P protein localization to cilium
5623 O_BomoASG15061_3prime_partial:A_BomoASG_c28909_g1_i1
419bp
 nucleobindin-2_isoform_X2_[Bombyx_mori]
GO:0001965 F G-protein alpha-subunit binding
GO:0003677 F DNA binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005791 C rough endoplasmic reticulum
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005801 C cis-Golgi network
GO:0005802 C trans-Golgi network
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0032580 C Golgi cisterna membrane
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:0072718 P response to cisplatin
GO:0090498 C extrinsic component of Golgi membrane
GO:0098547 C lumenal side of Golgi membrane
GO:1903533 P regulation of protein targeting
5624 O_BomoASG15062_internal:A_BomoASG_c28913_g1_i1
100bp
 uncharacterized_protein_LOC101745833_[Bombyx_mori]
5625 O_BomoASG15063_3prime_partial:A_BomoASG_c28913_g1_i2
157bp
 uncharacterized_protein_LOC101745833_[Bombyx_mori]
5626 O_BomoASG15064_5prime_partial:A_BomoASG_c28913_g1_i2
154bp
 uncharacterized_protein_LOC101745833_[Bombyx_mori]
5627 O_BomoASG15065_internal:A_BomoASG_c28913_g1_i3
404bp
 uncharacterized_protein_LOC101745833_[Bombyx_mori]
5628 O_BomoASG15066_complete:A_BomoASG_c28914_g1_i1
660bp
 transmembrane_9_superfamily_member_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0008150 P biological_process
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
5629 O_BomoASG15067_3prime_partial:A_BomoASG_c28915_g1_i1
494bp
 zinc_finger_protein_2_homolog_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
5630 O_BomoASG15068_internal:A_BomoASG_c28916_g1_i1
221bp
 nuclear_pore_complex_protein_Nup88_[Bombyx_mori]
GO:0000055 P ribosomal large subunit export from nucleus
GO:0000056 P ribosomal small subunit export from nucleus
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0007067 P mitotic cell cycle
GO:0015031 P protein transport
GO:0051028 P mRNA transport
5631 O_BomoASG15069_3prime_partial:A_BomoASG_c28916_g1_i2
365bp
 nuclear_pore_complex_protein_Nup88_[Bombyx_mori]
GO:0000055 P ribosomal large subunit export from nucleus
GO:0000056 P ribosomal small subunit export from nucleus
GO:0002376 P immune system process
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006955 P immune response
GO:0007424 P open tracheal system development
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0031965 C nuclear membrane
GO:0035147 P branch fusion, open tracheal system
GO:0046826 P negative regulation of protein export from nucleus
GO:0051028 P mRNA transport
5632 O_BomoASG1506_complete:A_BomoASG_c9385_g1_i1
328bp
 sideroflexin-2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015075 F ion transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0034220 P ion transmembrane transport
GO:0055072 P iron ion homeostasis
GO:0055085 P transmembrane transport
5633 O_BomoASG15070_3prime_partial:A_BomoASG_c28917_g1_i1
998bp
 uncharacterized_protein_LOC101746893_isoform_X1_[Bombyx_mori]
GO:0032403 F protein-containing complex binding
5634 O_BomoASG15071_5prime_partial:A_BomoASG_c28918_g1_i1
474bp
 serine_protease_inhibitor_13_precursor_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
5635 O_BomoASG15072_internal:A_BomoASG_c28921_g1_i1
486bp
 PREDICTED:_dentin_sialophosphoprotein-like_[Amyelois_transitella]
5636 O_BomoASG15073_3prime_partial:A_BomoASG_c28924_g1_i1
340bp
 protein_FAM98A_[Bombyx_mori]
GO:0044822 F RNA binding
GO:0072669 C tRNA-splicing ligase complex
5637 O_BomoASG15074_internal:A_BomoASG_c28927_g1_i1
375bp
 nuclear_pore_complex_protein_Nup98-Nup96_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0000776 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 F RNA binding
GO:0005215 F transporter activity
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006260 P DNA replication
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0006999 P nuclear pore organization
GO:0007062 P sister chromatid cohesion
GO:0007077 P mitotic nuclear membrane disassembly
GO:0008139 F nuclear localization sequence binding
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034398 P telomere tethering at nuclear periphery
GO:0034399 C nuclear periphery
GO:0042277 F peptide binding
GO:0042405 C nuclear inclusion body
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0044615 C nuclear pore nuclear basket
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
5638 O_BomoASG15075_5prime_partial:A_BomoASG_c28927_g1_i1
290bp
5639 O_BomoASG15076_complete:A_BomoASG_c28927_g1_i2
218bp
 nuclear_pore_complex_protein_Nup98-Nup96_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0000776 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 F RNA binding
GO:0005215 F transporter activity
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006260 P DNA replication
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0006999 P nuclear pore organization
GO:0007062 P sister chromatid cohesion
GO:0007077 P mitotic nuclear membrane disassembly
GO:0008139 F nuclear localization sequence binding
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034398 P telomere tethering at nuclear periphery
GO:0034399 C nuclear periphery
GO:0042277 F peptide binding
GO:0042405 C nuclear inclusion body
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0044615 C nuclear pore nuclear basket
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
5640 O_BomoASG15077_complete:A_BomoASG_c28927_g1_i2
130bp
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