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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5341 O_BomoASG14808_5prime_partial:A_BomoASG_c28804_g1_i1
132bp
5342 O_BomoASG14809_5prime_partial:A_BomoASG_c28804_g1_i1
125bp
 ATP-binding_cassette_sub-family_D_member_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005324 F long-chain fatty acid transporter activity
GO:0005325 F long-chain fatty acid transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0006635 P fatty acid beta-oxidation
GO:0006810 P transport
GO:0007031 P peroxisome organization
GO:0015910 P long-chain fatty acid import into peroxisome
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0019899 F enzyme binding
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042758 P long-chain fatty acid catabolic process
GO:0042760 P very long-chain fatty acid catabolic process
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0048471 C perinuclear region of cytoplasm
GO:0055085 P transmembrane transport
5343 O_BomoASG1480_internal:A_BomoASG_c9282_g1_i1
140bp
 DNA-binding_protein_RFX2_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001843 P neural tube closure
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0030030 P cell projection organization
GO:0042384 P cilium assembly
5344 O_BomoASG14810_internal:A_BomoASG_c28805_g1_i1
386bp
 DNA_primase_small_subunit_[Bombyx_mori]
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003896 F DNA primase activity
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005658 C alpha DNA polymerase:primase complex
GO:0006260 P DNA replication
GO:0006269 P DNA replication, synthesis of RNA primer
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:1990077 C primosome complex
5345 O_BomoASG14811_5prime_partial:A_BomoASG_c28806_g1_i1
174bp
 cuticular_protein_hypothetical_34_precursor_[Bombyx_mori]
GO:0005199 F structural constituent of cell wall
GO:0005576 C extracellular region
GO:0005618 C cell wall
GO:0007275 P multicellular organism development
5346 O_BomoASG14812_5prime_partial:A_BomoASG_c28806_g1_i1
145bp
 hypothetical_protein_GUITHDRAFT_120753_[Guillardia_theta_CCMP2712]
GO:0005199 F structural constituent of cell wall
GO:0005576 C extracellular region
GO:0005618 C cell wall
GO:0007275 P multicellular organism development
5347 O_BomoASG14813_5prime_partial:A_BomoASG_c28806_g1_i2
163bp
 cuticular_protein_hypothetical_25_precursor_[Bombyx_mori]
GO:0005199 F structural constituent of cell wall
GO:0005576 C extracellular region
GO:0005618 C cell wall
GO:0007275 P multicellular organism development
5348 O_BomoASG14814_5prime_partial:A_BomoASG_c28806_g1_i2
134bp
 DNA-binding_response_regulator_[Clostridium_sp._FS41]
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009405 P obsolete pathogenesis
GO:0035432 P positive regulation of gluconate transmembrane transport
5349 O_BomoASG14815_internal:A_BomoASG_c28807_g1_i1
101bp
 uncharacterized_protein_LOC110386636,_partial_[Bombyx_mori]
5350 O_BomoASG14816_internal:A_BomoASG_c28807_g1_i1
101bp
5351 O_BomoASG14817_internal:A_BomoASG_c28807_g1_i2
173bp
5352 O_BomoASG14818_internal:A_BomoASG_c28807_g1_i2
173bp
 uncharacterized_protein_LOC110386636,_partial_[Bombyx_mori]
5353 O_BomoASG14819_5prime_partial:A_BomoASG_c28807_g1_i2
145bp
5354 O_BomoASG1481_5prime_partial:A_BomoASG_c9282_g1_i1
107bp
5355 O_BomoASG14820_5prime_partial:A_BomoASG_c28809_g1_i1
364bp
 uncharacterized_protein_LOC101746806_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
5356 O_BomoASG14821_3prime_partial:A_BomoASG_c28809_g1_i1
154bp
5357 O_BomoASG14822_5prime_partial:A_BomoASG_c28809_g1_i1
139bp
5358 O_BomoASG14823_complete:A_BomoASG_c28809_g1_i1
130bp
5359 O_BomoASG14824_complete:A_BomoASG_c28809_g1_i1
113bp
5360 O_BomoASG14825_5prime_partial:A_BomoASG_c28811_g1_i1
151bp
5361 O_BomoASG14826_3prime_partial:A_BomoASG_c28811_g1_i2
122bp
5362 O_BomoASG14827_5prime_partial:A_BomoASG_c28811_g1_i2
109bp
 shootin-1_[Bombyx_mori]
5363 O_BomoASG14828_complete:A_BomoASG_c28813_g1_i1
362bp
 box_C/D_snoRNA_protein_1_[Bombyx_mori]
GO:0042254 P ribosome biogenesis
GO:0046872 F metal ion binding
5364 O_BomoASG14829_5prime_partial:A_BomoASG_c28813_g1_i2
247bp
 box_C/D_snoRNA_protein_1_[Bombyx_mori]
GO:0000492 P box C/D snoRNP assembly
GO:0001094 F TFIID-class transcription factor complex binding
GO:0019899 F enzyme binding
GO:0042254 P ribosome biogenesis
GO:0042802 F identical protein binding
GO:0046872 F metal ion binding
GO:0048254 P snoRNA localization
GO:0051117 F ATPase binding
GO:0051259 P protein complex oligomerization
GO:0070062 C extracellular exosome
GO:0070761 C pre-snoRNP complex
5365 O_BomoASG1482_internal:A_BomoASG_c9283_g1_i1
211bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA1109_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019915 P lipid storage
GO:0045444 P fat cell differentiation
GO:0051647 P nucleus localization
GO:0060612 P adipose tissue development
5366 O_BomoASG14830_5prime_partial:A_BomoASG_c28814_g1_i1
467bp
 ubiquitin-protein_ligase_E3B_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
5367 O_BomoASG14831_complete:A_BomoASG_c28814_g1_i1
130bp
5368 O_BomoASG14832_complete:A_BomoASG_c28814_g1_i1
104bp
5369 O_BomoASG14833_5prime_partial:A_BomoASG_c28814_g1_i1
103bp
5370 O_BomoASG14834_complete:A_BomoASG_c28815_g1_i1
299bp
 spermatogenesis-associated_protein_6_isoform_X3_[Bombyx_mori]
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