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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5311 O_BomoASG14781_5prime_partial:A_BomoASG_c28792_g1_i1
358bp
 putative_transcription_factor_capicua_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007362 P terminal region determination
GO:0007474 P imaginal disc-derived wing vein specification
GO:0030308 P negative regulation of cell growth
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046843 P dorsal appendage formation
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048592 P eye morphogenesis
GO:0070491 F DNA-binding transcription factor binding
5312 O_BomoASG14782_complete:A_BomoASG_c28792_g1_i1
112bp
5313 O_BomoASG14783_complete:A_BomoASG_c28794_g1_i1
229bp
 glutathione_S-transferase_epsilon_6_isoform_X1_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0008152 P metabolic process
GO:0016740 F transferase activity
5314 O_BomoASG14784_complete:A_BomoASG_c28794_g1_i2
229bp
 glutathione_S-transferase_epsilon_6_isoform_X1_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0008152 P metabolic process
GO:0016740 F transferase activity
5315 O_BomoASG14785_complete:A_BomoASG_c28794_g1_i3
229bp
 glutathione_S-transferase_epsilon_6_isoform_X1_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0008152 P metabolic process
GO:0016740 F transferase activity
5316 O_BomoASG14786_complete:A_BomoASG_c28795_g1_i1
341bp
 retinol_dehydrogenase_14_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008106 F alcohol dehydrogenase (NADP+) activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0052650 F NADP-retinol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
5317 O_BomoASG14787_complete:A_BomoASG_c28795_g1_i2
341bp
 retinol_dehydrogenase_14_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008106 F alcohol dehydrogenase (NADP+) activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0052650 F NADP-retinol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
5318 O_BomoASG14788_5prime_partial:A_BomoASG_c28796_g1_i1
318bp
 ribosomal_RNA-processing_protein_8_[Bombyx_mori]
GO:0000183 P rDNA heterochromatin assembly
GO:0005634 C nucleus
GO:0005677 C chromatin silencing complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0033553 C rDNA heterochromatin
GO:0035064 F methylated histone binding
GO:0042149 P cellular response to glucose starvation
GO:0044822 F RNA binding
GO:0046015 P regulation of transcription by glucose
GO:0071158 P regulation of cell cycle
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
5319 O_BomoASG14789_5prime_partial:A_BomoASG_c28796_g1_i3
373bp
 ribosomal_RNA-processing_protein_8_[Bombyx_mori]
GO:0000183 P rDNA heterochromatin assembly
GO:0005634 C nucleus
GO:0005677 C chromatin silencing complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0033553 C rDNA heterochromatin
GO:0035064 F methylated histone binding
GO:0042149 P cellular response to glucose starvation
GO:0044822 F RNA binding
GO:0046015 P regulation of transcription by glucose
GO:0071158 P regulation of cell cycle
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
5320 O_BomoASG1478_internal:A_BomoASG_c9261_g1_i1
124bp
 synaptic_vesicle_glycoprotein_2B_[Bombyx_mori]
5321 O_BomoASG14790_complete:A_BomoASG_c28797_g1_i2
230bp
 2-methoxy-6-polyprenyl-1,4-benzoquinol_methylase,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006744 P ubiquinone biosynthetic process
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043334 F 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
GO:0102005 F 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
5322 O_BomoASG14791_complete:A_BomoASG_c28797_g1_i3
300bp
 2-methoxy-6-polyprenyl-1,4-benzoquinol_methylase,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006744 P ubiquinone biosynthetic process
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043334 F 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
GO:0102005 F 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
5323 O_BomoASG14792_5prime_partial:A_BomoASG_c28798_g1_i1
108bp
 uncharacterized_protein_LOC101735705_isoform_X3_[Bombyx_mori]
5324 O_BomoASG14793_5prime_partial:A_BomoASG_c28799_g1_i1
490bp
 ATPase_family_AAA_domain-containing_protein_2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003682 F chromatin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031936 P obsolete negative regulation of chromatin silencing
GO:0042393 F histone binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070062 C extracellular exosome
5325 O_BomoASG14794_complete:A_BomoASG_c28799_g1_i1
190bp
5326 O_BomoASG14795_3prime_partial:A_BomoASG_c28799_g1_i1
100bp
5327 O_BomoASG14796_5prime_partial:A_BomoASG_c28799_g1_i2
246bp
 ATPase_family_AAA_domain-containing_protein_2_isoform_X3_[Bombyx_mori]
5328 O_BomoASG14797_complete:A_BomoASG_c28799_g1_i2
190bp
5329 O_BomoASG14798_complete:A_BomoASG_c28800_g1_i1
248bp
 uncharacterized_protein_[Bombyx_mori]
5330 O_BomoASG14799_complete:A_BomoASG_c28800_g1_i1
103bp
5331 O_BomoASG1479_5prime_partial:A_BomoASG_c9264_g1_i1
110bp
 ELMO_domain-containing_protein_2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0016020 C membrane
GO:0043234 C protein-containing complex
GO:0043547 P positive regulation of GTPase activity
GO:0050688 P regulation of defense response to virus
5332 O_BomoASG147_internal:A_BomoASG_c1122_g1_i1
147bp
 transferrin-like_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0006811 P ion transport
GO:0046872 F metal ion binding
GO:0055072 P iron ion homeostasis
5333 O_BomoASG14800_internal:A_BomoASG_c28801_g1_i1
237bp
 ataxin-2-like_protein_[Bombyx_mori]
GO:0002091 P negative regulation of receptor internalization
GO:0005154 F epidermal growth factor receptor binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005844 C polysome
GO:0008022 F protein C-terminus binding
GO:0010494 C cytoplasmic stress granule
GO:0010603 P regulation of cytoplasmic mRNA processing body assembly
GO:0016020 C membrane
GO:0021702 P cerebellar Purkinje cell differentiation
GO:0030529 C ribonucleoprotein complex
GO:0033962 P P-body assembly
GO:0034063 P stress granule assembly
GO:0040015 P negative regulation of multicellular organism growth
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048812 P neuron projection morphogenesis
GO:0048872 P homeostasis of number of cells
GO:0050692 F DNA binding domain binding
GO:0050905 P neuromuscular process
5334 O_BomoASG14801_complete:A_BomoASG_c28801_g1_i1
105bp
5335 O_BomoASG14802_3prime_partial:A_BomoASG_c28801_g1_i2
279bp
 ataxin-2-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007614 P short-term memory
GO:0007616 P long-term memory
GO:0009994 P oocyte differentiation
GO:0010494 C cytoplasmic stress granule
GO:0010603 P regulation of cytoplasmic mRNA processing body assembly
GO:0022008 P neurogenesis
GO:0022416 P chaeta development
GO:0030833 P regulation of actin filament polymerization
GO:0032092 P positive regulation of protein binding
GO:0034063 P stress granule assembly
GO:0042051 P compound eye photoreceptor development
GO:0044822 F RNA binding
GO:0045475 P locomotor rhythm
GO:0046959 P habituation
GO:0048749 P compound eye development
GO:0051823 P regulation of synapse structural plasticity
GO:0060965 P negative regulation of gene silencing by miRNA
GO:0090328 P regulation of olfactory learning
GO:0097167 P circadian regulation of translation
GO:1901216 P positive regulation of neuron death
5336 O_BomoASG14803_complete:A_BomoASG_c28801_g1_i2
105bp
5337 O_BomoASG14804_internal:A_BomoASG_c28802_g1_i1
342bp
 hypothetical_protein_TcasGA2_TC001839_[Tribolium_castaneum]
5338 O_BomoASG14805_complete:A_BomoASG_c28802_g1_i1
108bp
5339 O_BomoASG14806_complete:A_BomoASG_c28803_g1_i1
3691bp
 uncharacterized_protein_LOC101743552_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0001701 P in utero embryonic development
GO:0002039 F p53 binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007420 P brain development
GO:0008013 F beta-catenin binding
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0016055 P Wnt signaling pathway
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0032508 P DNA duplex unwinding
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0043044 P chromatin remodeling
GO:0043066 P negative regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0045945 P positive regulation of transcription by RNA polymerase III
GO:0048565 P digestive tract development
GO:0060070 P canonical Wnt signaling pathway
GO:0070016 F armadillo repeat domain binding
GO:0071339 C MLL1 complex
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000270 P negative regulation of fibroblast apoptotic process
5340 O_BomoASG14807_5prime_partial:A_BomoASG_c28803_g1_i1
110bp
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