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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4711 O_BomoASG14240_3prime_partial:A_BomoASG_c28564_g1_i2
106bp
4712 O_BomoASG14241_3prime_partial:A_BomoASG_c28566_g1_i1
316bp
 probable_nucleoporin_Nup58_isoform_X1_[Bombyx_mori]
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 F RNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0006405 P RNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0008139 F nuclear localization sequence binding
GO:0015031 P protein transport
GO:0017056 F structural constituent of nuclear pore
GO:0034398 P telomere tethering at nuclear periphery
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0051028 P mRNA transport
4713 O_BomoASG14242_5prime_partial:A_BomoASG_c28566_g1_i1
105bp
4714 O_BomoASG14243_3prime_partial:A_BomoASG_c28567_g1_i1
118bp
 uncharacterized_protein_LOC110385201_[Bombyx_mori]
4715 O_BomoASG14244_3prime_partial:A_BomoASG_c28568_g1_i1
198bp
 uncharacterized_protein_LOC101740198_[Bombyx_mori]
4716 O_BomoASG14245_internal:A_BomoASG_c28568_g1_i2
136bp
 uncharacterized_protein_LOC101740198_[Bombyx_mori]
4717 O_BomoASG14246_complete:A_BomoASG_c28569_g1_i1
298bp
 JNK1/MAPK8-associated_membrane_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031625 F ubiquitin protein ligase binding
4718 O_BomoASG14247_complete:A_BomoASG_c28569_g1_i2
298bp
 JNK1/MAPK8-associated_membrane_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031625 F ubiquitin protein ligase binding
4719 O_BomoASG14248_3prime_partial:A_BomoASG_c28571_g1_i1
311bp
 PREDICTED:_uncharacterized_protein_LOC105387464_[Plutella_xylostella]
4720 O_BomoASG14249_5prime_partial:A_BomoASG_c28571_g1_i1
215bp
 ORF2_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4721 O_BomoASG1424_internal:A_BomoASG_c8891_g1_i1
166bp
 zinc_finger_protein_81_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
4722 O_BomoASG14250_internal:A_BomoASG_c28571_g1_i2
290bp
 PREDICTED:_uncharacterized_protein_LOC105387464_[Plutella_xylostella]
4723 O_BomoASG14251_3prime_partial:A_BomoASG_c28571_g1_i3
311bp
 PREDICTED:_uncharacterized_protein_LOC105387464_[Plutella_xylostella]
4724 O_BomoASG14252_5prime_partial:A_BomoASG_c28571_g1_i3
134bp
 PREDICTED:_uncharacterized_protein_LOC106138248_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4725 O_BomoASG14253_internal:A_BomoASG_c28571_g1_i4
306bp
 PREDICTED:_uncharacterized_protein_LOC105387464_[Plutella_xylostella]
4726 O_BomoASG14254_internal:A_BomoASG_c28574_g1_i1
141bp
 Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4727 O_BomoASG14255_internal:A_BomoASG_c28575_g1_i1
255bp
 uncharacterized_protein_LOC101746539_[Bombyx_mori]
4728 O_BomoASG14256_internal:A_BomoASG_c28575_g1_i2
232bp
 uncharacterized_protein_LOC101746539_[Bombyx_mori]
4729 O_BomoASG14257_3prime_partial:A_BomoASG_c28575_g1_i3
425bp
 uncharacterized_protein_LOC101746539_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005923 C bicellular tight junction
GO:0030674 F protein-macromolecule adaptor activity
GO:0090162 P establishment of epithelial cell polarity
4730 O_BomoASG14258_complete:A_BomoASG_c28576_g1_i1
1059bp
 cGMP-dependent_protein_kinase,_isozyme_2_forms_cD5/T2-like_isoform_X1_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004690 F cyclic nucleotide-dependent protein kinase activity
GO:0004692 F cGMP-dependent protein kinase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007614 P short-term memory
GO:0007616 P long-term memory
GO:0007631 P feeding behavior
GO:0008016 P regulation of heart contraction
GO:0008345 P larval locomotory behavior
GO:0009744 P response to sucrose
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019233 P sensory perception of pain
GO:0030536 P larval feeding behavior
GO:0030553 F cGMP binding
GO:0032095 P regulation of response to food
GO:0046959 P habituation
4731 O_BomoASG14259_complete:A_BomoASG_c28576_g1_i1
124bp
4732 O_BomoASG1425_5prime_partial:A_BomoASG_c8891_g1_i1
153bp
4733 O_BomoASG14260_complete:A_BomoASG_c28576_g1_i2
1059bp
 cGMP-dependent_protein_kinase,_isozyme_2_forms_cD5/T2-like_isoform_X1_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004690 F cyclic nucleotide-dependent protein kinase activity
GO:0004692 F cGMP-dependent protein kinase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007614 P short-term memory
GO:0007616 P long-term memory
GO:0007631 P feeding behavior
GO:0008016 P regulation of heart contraction
GO:0008345 P larval locomotory behavior
GO:0009744 P response to sucrose
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019233 P sensory perception of pain
GO:0030536 P larval feeding behavior
GO:0030553 F cGMP binding
GO:0032095 P regulation of response to food
GO:0046959 P habituation
4734 O_BomoASG14261_complete:A_BomoASG_c28576_g1_i2
124bp
4735 O_BomoASG14262_complete:A_BomoASG_c28576_g1_i3
1059bp
 cGMP-dependent_protein_kinase,_isozyme_2_forms_cD5/T2-like_isoform_X1_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004690 F cyclic nucleotide-dependent protein kinase activity
GO:0004692 F cGMP-dependent protein kinase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007614 P short-term memory
GO:0007616 P long-term memory
GO:0007631 P feeding behavior
GO:0008016 P regulation of heart contraction
GO:0008345 P larval locomotory behavior
GO:0009744 P response to sucrose
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019233 P sensory perception of pain
GO:0030536 P larval feeding behavior
GO:0030553 F cGMP binding
GO:0032095 P regulation of response to food
GO:0046959 P habituation
4736 O_BomoASG14263_complete:A_BomoASG_c28576_g1_i3
124bp
4737 O_BomoASG14264_complete:A_BomoASG_c28576_g1_i4
745bp
 PKG-Ib_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004690 F cyclic nucleotide-dependent protein kinase activity
GO:0004692 F cGMP-dependent protein kinase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007614 P short-term memory
GO:0007616 P long-term memory
GO:0007631 P feeding behavior
GO:0008016 P regulation of heart contraction
GO:0008345 P larval locomotory behavior
GO:0009744 P response to sucrose
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019233 P sensory perception of pain
GO:0030536 P larval feeding behavior
GO:0030553 F cGMP binding
GO:0032095 P regulation of response to food
GO:0046959 P habituation
4738 O_BomoASG14265_complete:A_BomoASG_c28576_g1_i4
135bp
4739 O_BomoASG14266_complete:A_BomoASG_c28576_g1_i4
124bp
4740 O_BomoASG14267_5prime_partial:A_BomoASG_c28577_g1_i2
107bp
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