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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4321 O_BomoASG13890_complete:A_BomoASG_c28421_g1_i3
110bp
4322 O_BomoASG13891_complete:A_BomoASG_c28421_g1_i3
102bp
4323 O_BomoASG13892_complete:A_BomoASG_c28421_g1_i3
101bp
4324 O_BomoASG13893_complete:A_BomoASG_c28421_g1_i3
101bp
4325 O_BomoASG13894_complete:A_BomoASG_c28422_g1_i1
252bp
 uncharacterized_protein_LOC101745394_[Bombyx_mori]
4326 O_BomoASG13895_5prime_partial:A_BomoASG_c28425_g1_i1
248bp
 LOW_QUALITY_PROTEIN:_CDP-diacylglycerol--glycerol-3-phosphate_3-phosphatidyltransferase,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0006629 P lipid metabolic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0008444 F CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
GO:0008654 P phospholipid biosynthetic process
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
4327 O_BomoASG13896_complete:A_BomoASG_c28426_g1_i1
496bp
 calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
4328 O_BomoASG13897_complete:A_BomoASG_c28426_g1_i2
533bp
 calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
4329 O_BomoASG13898_complete:A_BomoASG_c28426_g1_i2
165bp
 calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0007399 P nervous system development
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0033017 C sarcoplasmic reticulum membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
4330 O_BomoASG13899_complete:A_BomoASG_c28426_g1_i2
125bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_calcium_homeostasis_endoplasmic_reticulum_protein_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0007399 P nervous system development
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0033017 C sarcoplasmic reticulum membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
4331 O_BomoASG1389_3prime_partial:A_BomoASG_c8533_g1_i1
277bp
 chromobox_protein_homolog_5-like_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000784 C chromosome, telomeric region
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0005730 C nucleolus
GO:0010369 C chromocenter
GO:0016605 C PML body
GO:0017053 C transcription repressor complex
GO:0030674 F protein-macromolecule adaptor activity
GO:0035064 F methylated histone binding
GO:0035097 C histone methyltransferase complex
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070491 F DNA-binding transcription factor binding
4332 O_BomoASG138_internal:A_BomoASG_c1050_g1_i1
105bp
 uncharacterized_LOC101743290_precursor_[Bombyx_mori]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0016055 P Wnt signaling pathway
4333 O_BomoASG13900_complete:A_BomoASG_c28426_g1_i3
533bp
 calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
4334 O_BomoASG13901_complete:A_BomoASG_c28426_g1_i3
273bp
 calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
4335 O_BomoASG13902_complete:A_BomoASG_c28426_g1_i4
817bp
 calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
4336 O_BomoASG13903_internal:A_BomoASG_c28427_g1_i1
470bp
 acetylcholinesterase_[Bombyx_mori]
GO:0001507 P acetylcholine catabolic process in synaptic cleft
GO:0003990 F acetylcholinesterase activity
GO:0004104 F cholinesterase activity
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0031225 C anchored component of membrane
GO:0042135 P neurotransmitter catabolic process
GO:0043083 C synaptic cleft
GO:0045202 C synapse
GO:0052689 F carboxylic ester hydrolase activity
4337 O_BomoASG13904_complete:A_BomoASG_c28427_g1_i1
141bp
4338 O_BomoASG13905_internal:A_BomoASG_c28427_g1_i2
205bp
 acetylcholinesterase_[Bombyx_mandarina]
GO:0001507 P acetylcholine catabolic process in synaptic cleft
GO:0003990 F acetylcholinesterase activity
GO:0004104 F cholinesterase activity
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0031225 C anchored component of membrane
GO:0042135 P neurotransmitter catabolic process
GO:0043083 C synaptic cleft
GO:0045202 C synapse
GO:0052689 F carboxylic ester hydrolase activity
4339 O_BomoASG13906_complete:A_BomoASG_c28427_g1_i2
141bp
4340 O_BomoASG13907_3prime_partial:A_BomoASG_c28428_g1_i1
168bp
 PREDICTED:_sulfated_surface_glycoprotein_185-like_[Papilio_machaon]
4341 O_BomoASG13908_3prime_partial:A_BomoASG_c28430_g1_i2
333bp
 ATP-binding_cassette_sub-family_F_member_3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0051607 P defense response to virus
4342 O_BomoASG13909_5prime_partial:A_BomoASG_c28430_g1_i2
236bp
4343 O_BomoASG1390_internal:A_BomoASG_c8548_g1_i1
112bp
 ras_GTPase-activating-like_protein_IQGAP1_[Bombyx_mori]
GO:0001726 C ruffle
GO:0001817 P regulation of cytokine production
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0007165 P signal transduction
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007264 P small GTPase mediated signal transduction
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0015629 C actin cytoskeleton
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0017048 F small GTPase binding
GO:0019901 F protein kinase binding
GO:0019903 F protein phosphatase binding
GO:0019904 F protein domain specific binding
GO:0030424 C axon
GO:0030426 C growth cone
GO:0030496 C midbody
GO:0030529 C ribonucleoprotein complex
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0031252 C cell leading edge
GO:0032403 F protein-containing complex binding
GO:0035305 P negative regulation of dephosphorylation
GO:0036057 C slit diaphragm
GO:0036120 P cellular response to platelet-derived growth factor stimulus
GO:0036464 C cytoplasmic ribonucleoprotein granule
GO:0043005 C neuron projection
GO:0043087 P regulation of GTPase activity
GO:0043234 C protein-containing complex
GO:0043539 F protein serine/threonine kinase activator activity
GO:0043547 P positive regulation of GTPase activity
GO:0044344 P cellular response to fibroblast growth factor stimulus
GO:0044548 F S100 protein binding
GO:0045860 P positive regulation of protein kinase activity
GO:0048008 P platelet-derived growth factor receptor signaling pathway
GO:0048365 F small GTPase binding
GO:0070062 C extracellular exosome
GO:0071277 P cellular response to calcium ion
GO:0071364 P cellular response to epidermal growth factor stimulus
GO:0071902 P positive regulation of protein serine/threonine kinase activity
GO:0072015 P glomerular visceral epithelial cell development
GO:1990138 P neuron projection extension
4344 O_BomoASG13910_5prime_partial:A_BomoASG_c28430_g2_i1
381bp
 ATP-binding_cassette_sub-family_F_member_3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0051607 P defense response to virus
4345 O_BomoASG13911_3prime_partial:A_BomoASG_c28432_g1_i1
164bp
 serine/threonine-protein_kinase_MARK2_isoform_X9_[Bombyx_mori]
4346 O_BomoASG13912_3prime_partial:A_BomoASG_c28432_g1_i1
118bp
4347 O_BomoASG13913_internal:A_BomoASG_c28432_g1_i2
112bp
 serine/threonine-protein_kinase_MARK2_isoform_X9_[Bombyx_mori]
4348 O_BomoASG13914_3prime_partial:A_BomoASG_c28432_g1_i3
164bp
 serine/threonine-protein_kinase_MARK2_isoform_X9_[Bombyx_mori]
4349 O_BomoASG13915_3prime_partial:A_BomoASG_c28432_g1_i4
164bp
 serine/threonine-protein_kinase_MARK2_isoform_X9_[Bombyx_mori]
4350 O_BomoASG13916_complete:A_BomoASG_c28432_g1_i4
113bp
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