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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3991 O_BomoASG13593_complete:A_BomoASG_c28296_g1_i2
928bp
 potassium_voltage-gated_channel_subfamily_H_member_6-like_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005242 F inward rectifier potassium channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007623 P circadian rhythm
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042391 P regulation of membrane potential
GO:0051291 P protein heterooligomerization
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
3992 O_BomoASG13594_complete:A_BomoASG_c28296_g1_i2
161bp
3993 O_BomoASG13595_complete:A_BomoASG_c28296_g1_i2
142bp
3994 O_BomoASG13596_complete:A_BomoASG_c28296_g1_i2
132bp
3995 O_BomoASG13597_complete:A_BomoASG_c28296_g1_i3
902bp
 potassium_voltage-gated_channel_subfamily_H_member_6-like_isoform_X6_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042391 P regulation of membrane potential
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
3996 O_BomoASG13598_complete:A_BomoASG_c28296_g1_i3
161bp
3997 O_BomoASG13599_complete:A_BomoASG_c28296_g1_i3
132bp
3998 O_BomoASG1359_5prime_partial:A_BomoASG_c8193_g1_i1
459bp
 26S_protease_regulatory_subunit_6A-B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000502 C proteasome complex
GO:0000932 C P-body
GO:0001824 P blastocyst development
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0017025 F TBP-class protein binding
GO:0022624 C proteasome accessory complex
GO:0030163 P protein catabolic process
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031595 C nuclear proteasome complex
GO:0031597 C cytosolic proteasome complex
GO:0036402 F proteasome-activating activity
GO:0045899 P positive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:1901800 P positive regulation of proteasomal protein catabolic process
3999 O_BomoASG135_internal:A_BomoASG_c984_g1_i1
103bp
 tyrosine_hydroxylase_[Bombyx_mandarina]
GO:0004497 F monooxygenase activity
GO:0004511 F tyrosine 3-monooxygenase activity
GO:0005506 F iron ion binding
GO:0005575 C cellular_component
GO:0006584 P catecholamine metabolic process
GO:0007619 P courtship behavior
GO:0008049 P male courtship behavior
GO:0008344 P adult locomotory behavior
GO:0009072 P aromatic amino acid family metabolic process
GO:0009611 P response to wounding
GO:0016491 F oxidoreductase activity
GO:0016714 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen
GO:0035220 P wing disc development
GO:0040040 P thermosensory behavior
GO:0042053 P regulation of dopamine metabolic process
GO:0042136 P neurotransmitter biosynthetic process
GO:0042416 P dopamine biosynthetic process
GO:0042417 P dopamine metabolic process
GO:0042423 P catecholamine biosynthetic process
GO:0043052 P thermotaxis
GO:0046872 F metal ion binding
GO:0048066 P developmental pigmentation
GO:0048067 P cuticle pigmentation
GO:0048082 P regulation of adult chitin-containing cuticle pigmentation
GO:0048085 P adult chitin-containing cuticle pigmentation
GO:0055114 P obsolete oxidation-reduction process
GO:2000274 P regulation of epithelial cell migration, open tracheal system
4000 O_BomoASG13600_complete:A_BomoASG_c28296_g1_i4
662bp
 potassium_voltage-gated_channel_subfamily_H_member_6-like_isoform_X3_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005242 F inward rectifier potassium channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007623 P circadian rhythm
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042391 P regulation of membrane potential
GO:0051291 P protein heterooligomerization
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
4001 O_BomoASG13601_complete:A_BomoASG_c28296_g1_i4
142bp
4002 O_BomoASG13602_complete:A_BomoASG_c28296_g1_i5
902bp
 potassium_voltage-gated_channel_subfamily_H_member_6-like_isoform_X6_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042391 P regulation of membrane potential
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
4003 O_BomoASG13603_complete:A_BomoASG_c28296_g1_i5
161bp
4004 O_BomoASG13604_complete:A_BomoASG_c28296_g1_i5
132bp
4005 O_BomoASG13605_complete:A_BomoASG_c28296_g1_i6
954bp
 potassium_voltage-gated_channel_subfamily_H_member_6-like_isoform_X3_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042391 P regulation of membrane potential
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
4006 O_BomoASG13606_complete:A_BomoASG_c28296_g1_i6
161bp
4007 O_BomoASG13607_complete:A_BomoASG_c28296_g1_i6
142bp
4008 O_BomoASG13608_complete:A_BomoASG_c28296_g1_i6
132bp
4009 O_BomoASG13609_complete:A_BomoASG_c28297_g1_i1
373bp
 leucine-rich_repeat_protein_SHOC-2_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4010 O_BomoASG1360_5prime_partial:A_BomoASG_c8193_g1_i2
464bp
 26S_protease_regulatory_subunit_6A-B_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0000502 C proteasome complex
GO:0000932 C P-body
GO:0001824 P blastocyst development
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006521 P regulation of cellular amino acid metabolic process
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0017025 F TBP-class protein binding
GO:0022624 C proteasome accessory complex
GO:0030163 P protein catabolic process
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0031595 C nuclear proteasome complex
GO:0031597 C cytosolic proteasome complex
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0036402 F proteasome-activating activity
GO:0038061 P NIK/NF-kappaB signaling
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043488 P regulation of mRNA stability
GO:0045899 P positive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:0050852 P T cell receptor signaling pathway
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:1901800 P positive regulation of proteasomal protein catabolic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
4011 O_BomoASG13610_complete:A_BomoASG_c28297_g1_i2
367bp
 leucine-rich_repeat_protein_SHOC-2_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4012 O_BomoASG13611_complete:A_BomoASG_c28299_g1_i1
469bp
 multiple_inositol_polyphosphate_phosphatase_1_isoform_X2_[Bombyx_mori]
GO:0003993 F acid phosphatase activity
GO:0004446 F inositol-hexakisphosphate phosphatase activity
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0034417 F bisphosphoglycerate 3-phosphatase activity
GO:0052826 F inositol hexakisphosphate 2-phosphatase activity
4013 O_BomoASG13612_complete:A_BomoASG_c28299_g1_i2
469bp
 multiple_inositol_polyphosphate_phosphatase_1_isoform_X2_[Bombyx_mori]
GO:0003993 F acid phosphatase activity
GO:0004446 F inositol-hexakisphosphate phosphatase activity
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0034417 F bisphosphoglycerate 3-phosphatase activity
GO:0052826 F inositol hexakisphosphate 2-phosphatase activity
4014 O_BomoASG13613_complete:A_BomoASG_c28299_g1_i3
469bp
 multiple_inositol_polyphosphate_phosphatase_1_isoform_X2_[Bombyx_mori]
GO:0003993 F acid phosphatase activity
GO:0004446 F inositol-hexakisphosphate phosphatase activity
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0034417 F bisphosphoglycerate 3-phosphatase activity
GO:0052826 F inositol hexakisphosphate 2-phosphatase activity
4015 O_BomoASG13614_5prime_partial:A_BomoASG_c28301_g2_i1
161bp
 fork_head_domain-containing_protein_FD4_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0043565 F sequence-specific DNA binding
4016 O_BomoASG13615_5prime_partial:A_BomoASG_c28301_g2_i2
148bp
 fork_head_domain-containing_protein_FD4_[Bombyx_mori]
4017 O_BomoASG13616_3prime_partial:A_BomoASG_c28302_g1_i1
330bp
 uncharacterized_protein_YJR142W_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0044715 F 8-oxo-dGDP phosphatase activity
4018 O_BomoASG13617_5prime_partial:A_BomoASG_c28302_g1_i1
147bp
4019 O_BomoASG13618_3prime_partial:A_BomoASG_c28302_g1_i2
330bp
 uncharacterized_protein_YJR142W_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0044715 F 8-oxo-dGDP phosphatase activity
4020 O_BomoASG13619_5prime_partial:A_BomoASG_c28302_g1_i2
147bp
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