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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3931 O_BomoASG13539_complete:A_BomoASG_c28278_g1_i1
156bp
3932 O_BomoASG1353_internal:A_BomoASG_c8175_g1_i1
100bp
 uncharacterized_protein_LOC101736778_[Bombyx_mori]
3933 O_BomoASG13540_complete:A_BomoASG_c28278_g1_i1
129bp
3934 O_BomoASG13541_5prime_partial:A_BomoASG_c28278_g1_i2
577bp
 zinc_finger_protein_845_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3935 O_BomoASG13542_complete:A_BomoASG_c28278_g1_i2
230bp
3936 O_BomoASG13543_complete:A_BomoASG_c28278_g1_i2
129bp
3937 O_BomoASG13544_complete:A_BomoASG_c28278_g1_i3
496bp
 zinc_finger_protein_845_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3938 O_BomoASG13545_complete:A_BomoASG_c28278_g1_i3
230bp
3939 O_BomoASG13546_complete:A_BomoASG_c28278_g1_i3
129bp
3940 O_BomoASG13547_5prime_partial:A_BomoASG_c28278_g2_i1
252bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3941 O_BomoASG13548_complete:A_BomoASG_c28278_g2_i1
114bp
3942 O_BomoASG13549_complete:A_BomoASG_c28278_g2_i1
104bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
3943 O_BomoASG1354_3prime_partial:A_BomoASG_c8189_g1_i1
269bp
 zinc_finger_RNA-binding_protein_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
3944 O_BomoASG13550_5prime_partial:A_BomoASG_c28278_g1_i4
431bp
 zinc_finger_protein_845_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
3945 O_BomoASG13551_3prime_partial:A_BomoASG_c28278_g1_i4
230bp
3946 O_BomoASG13552_complete:A_BomoASG_c28278_g1_i4
129bp
3947 O_BomoASG13553_complete:A_BomoASG_c28278_g1_i5
216bp
 zinc_finger_protein_845_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
3948 O_BomoASG13554_complete:A_BomoASG_c28278_g1_i5
129bp
3949 O_BomoASG13555_3prime_partial:A_BomoASG_c28278_g1_i6
198bp
 zinc_finger_protein_845_[Bombyx_mori]
3950 O_BomoASG13556_complete:A_BomoASG_c28279_g1_i1
679bp
 ralBP1-associated_Eps_domain-containing_protein_1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0046872 F metal ion binding
3951 O_BomoASG13557_5prime_partial:A_BomoASG_c28280_g1_i1
196bp
 zinc_transporter_2_isoform_X2_[Bombyx_mori]
GO:0005385 F zinc ion transmembrane transporter activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006829 P zinc ion transport
GO:0008324 F cation transmembrane transporter activity
GO:0010043 P response to zinc ion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0051050 P positive regulation of transport
GO:0055085 P transmembrane transport
GO:0061088 P regulation of sequestering of zinc ion
GO:0071577 P zinc ion transmembrane transport
GO:0098655 P cation transmembrane transport
3952 O_BomoASG13558_complete:A_BomoASG_c28281_g1_i1
719bp
 protein_hu-li_tai_shao_[Bombyx_mori]
GO:0000212 P meiotic spindle organization
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007411 P axon guidance
GO:0007527 P adult somatic muscle development
GO:0008302 P female germline ring canal formation, actin assembly
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030154 P cell differentiation
GO:0030721 P spectrosome organization
GO:0030723 P ovarian fusome organization
GO:0030724 P testicular fusome organization
GO:0031987 P locomotion involved in locomotory behavior
GO:0035183 C female germline ring canal inner rim
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045172 C germline ring canal
GO:0045214 P sarcomere organization
GO:0045478 P fusome organization
GO:0048134 P germ-line cyst formation
GO:0048135 P female germ-line cyst formation
GO:0048477 P oogenesis
GO:0051297 P centrosome cycle
GO:0061572 P actin filament bundle organization
GO:0070050 P neuron cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
3953 O_BomoASG13559_complete:A_BomoASG_c28281_g1_i1
250bp
3954 O_BomoASG1355_complete:A_BomoASG_c8189_g1_i1
180bp
3955 O_BomoASG13560_complete:A_BomoASG_c28281_g1_i1
183bp
3956 O_BomoASG13561_complete:A_BomoASG_c28281_g1_i2
727bp
 protein_hu-li_tai_shao_[Bombyx_mori]
GO:0000212 P meiotic spindle organization
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007411 P axon guidance
GO:0007527 P adult somatic muscle development
GO:0008302 P female germline ring canal formation, actin assembly
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030154 P cell differentiation
GO:0030721 P spectrosome organization
GO:0030723 P ovarian fusome organization
GO:0030724 P testicular fusome organization
GO:0031987 P locomotion involved in locomotory behavior
GO:0035183 C female germline ring canal inner rim
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045172 C germline ring canal
GO:0045214 P sarcomere organization
GO:0045478 P fusome organization
GO:0048134 P germ-line cyst formation
GO:0048135 P female germ-line cyst formation
GO:0048477 P oogenesis
GO:0051297 P centrosome cycle
GO:0061572 P actin filament bundle organization
GO:0070050 P neuron cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
3957 O_BomoASG13562_complete:A_BomoASG_c28281_g1_i2
258bp
3958 O_BomoASG13563_complete:A_BomoASG_c28281_g1_i2
183bp
3959 O_BomoASG13564_complete:A_BomoASG_c28281_g1_i3
451bp
 protein_hu-li_tai_shao_[Bombyx_mori]
GO:0000212 P meiotic spindle organization
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007411 P axon guidance
GO:0007527 P adult somatic muscle development
GO:0008302 P female germline ring canal formation, actin assembly
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030154 P cell differentiation
GO:0030721 P spectrosome organization
GO:0030723 P ovarian fusome organization
GO:0030724 P testicular fusome organization
GO:0031987 P locomotion involved in locomotory behavior
GO:0035183 C female germline ring canal inner rim
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045172 C germline ring canal
GO:0045214 P sarcomere organization
GO:0045478 P fusome organization
GO:0048134 P germ-line cyst formation
GO:0048135 P female germ-line cyst formation
GO:0048477 P oogenesis
GO:0051297 P centrosome cycle
GO:0061572 P actin filament bundle organization
GO:0070050 P neuron cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
3960 O_BomoASG13565_complete:A_BomoASG_c28281_g1_i3
183bp
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