Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
331	O_BomoASG10299_5prime_partial:A_BomoASG_c26205_g1_i4 120bp	Bomo_Chr21
332	O_BomoASG1029_internal:A_BomoASG_c6443_g1_i1 116bp	Bomo_Chr24	hypothetical_protein_KGM_205926_[Danaus_plexippus_plexippus]
333	O_BomoASG102_3prime_partial:A_BomoASG_c609_g1_i1 155bp	Bomo_Chr20	activin_receptor_type-1_isoform_X2_[Bombyx_mori]
334	O_BomoASG10300_5prime_partial:A_BomoASG_c26205_g1_i5 201bp	Bomo_Chr21	myoneurin_isoform_X2_[Bombyx_mori]
335	O_BomoASG10301_internal:A_BomoASG_c26206_g1_i1 461bp	Bomo_Chr23	mucin-17_[Bombyx_mori]
336	O_BomoASG10302_complete:A_BomoASG_c26206_g1_i1 188bp	Bomo_Chr23
337	O_BomoASG10303_internal:A_BomoASG_c26207_g1_i1 147bp	Bomo_Chr10	patched_domain-containing_protein_3_[Bombyx_mori]	GO:0007165 P signal transduction GO:0008158 F hedgehog receptor activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0097225 C sperm midpiece
338	O_BomoASG10304_internal:A_BomoASG_c26207_g1_i2 124bp	Bomo_Chr10	patched_domain-containing_protein_3_[Bombyx_mori]	GO:0007165 P signal transduction GO:0008158 F hedgehog receptor activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0097225 C sperm midpiece
339	O_BomoASG10305_3prime_partial:A_BomoASG_c26207_g1_i3 230bp	Bomo_Chr10	patched_domain-containing_protein_3_[Bombyx_mori]	GO:0007165 P signal transduction GO:0008158 F hedgehog receptor activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0097225 C sperm midpiece
340	O_BomoASG10306_5prime_partial:A_BomoASG_c26208_g1_i1 426bp	Bomo_Chr22	calcium_uptake_protein_1_homolog,_mitochondrial_[Bombyx_mori]	GO:0005509 F calcium ion binding GO:0005739 C mitochondrion GO:0005758 C mitochondrial intermembrane space GO:0006810 P transport GO:0006811 P ion transport GO:0006816 P calcium ion transport GO:0046872 F metal ion binding GO:0051561 P positive regulation of mitochondrial calcium ion concentration
341	O_BomoASG10307_3prime_partial:A_BomoASG_c26211_g1_i1 197bp	Bomo_Chr20	uncharacterized_protein_LOC101737721_[Bombyx_mori]
342	O_BomoASG10308_3prime_partial:A_BomoASG_c26211_g1_i2 259bp	Bomo_Chr20	uncharacterized_protein_LOC101737721_[Bombyx_mori]
343	O_BomoASG10309_3prime_partial:A_BomoASG_c26211_g1_i3 187bp	Bomo_Chr20	uncharacterized_protein_LOC101737721_[Bombyx_mori]
344	O_BomoASG1030_5prime_partial:A_BomoASG_c6443_g1_i1 105bp	Bomo_Chr24
345	O_BomoASG10310_3prime_partial:A_BomoASG_c26211_g1_i4 176bp	Bomo_Chr20	uncharacterized_protein_LOC101737721_[Bombyx_mori]
346	O_BomoASG10311_3prime_partial:A_BomoASG_c26212_g1_i1 203bp	Bomo_Chr4	pre-mRNA-splicing_factor_CWC25_homolog_[Bombyx_mori]	GO:0005654 C nucleoplasm
347	O_BomoASG10312_internal:A_BomoASG_c26212_g1_i2 135bp	Bomo_Chr4	pre-mRNA-splicing_factor_CWC25_homolog_[Bombyx_mori]	GO:0005654 C nucleoplasm
348	O_BomoASG10313_3prime_partial:A_BomoASG_c26214_g1_i1 222bp	Bomo_Chr19	X-ray_repair_cross-complementing_protein_6_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000723 P telomere maintenance GO:0000781 C chromosome, telomeric region GO:0000784 C chromosome, telomeric region GO:0003677 F DNA binding GO:0003684 F damaged DNA binding GO:0003690 F double-stranded DNA binding GO:0004003 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005694 C chromosome GO:0005724 C obsolete nuclear telomeric heterochromatin GO:0006281 P DNA repair GO:0006303 P double-strand break repair via nonhomologous end joining GO:0006310 P DNA recombination GO:0006974 P cellular response to DNA damage stimulus GO:0016787 F hydrolase activity GO:0032508 P DNA duplex unwinding GO:0042162 F telomeric DNA binding GO:0043564 C Ku70:Ku80 complex GO:0071480 P cellular response to gamma radiation GO:0071481 P cellular response to X-ray
349	O_BomoASG10314_internal:A_BomoASG_c26214_g1_i2 183bp	Bomo_Chr19	X-ray_repair_cross-complementing_protein_6_[Bombyx_mori]
350	O_BomoASG10315_3prime_partial:A_BomoASG_c26220_g1_i1 168bp	Bomo_Chr25	DNA_polymerase_epsilon_catalytic_subunit_A_[Bombyx_mori]	GO:0000082 P G1/S transition of mitotic cell cycle GO:0000166 F nucleotide binding GO:0000731 P DNA synthesis involved in DNA repair GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003682 F chromatin binding GO:0003887 F DNA-directed DNA polymerase activity GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005886 C plasma membrane GO:0006260 P DNA replication GO:0006281 P DNA repair GO:0006287 P base-excision repair, gap-filling GO:0006297 P nucleotide-excision repair, DNA gap filling GO:0006974 P cellular response to DNA damage stimulus GO:0008270 F zinc ion binding GO:0008408 F 3'-5' exonuclease activity GO:0008622 C epsilon DNA polymerase complex GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0046872 F metal ion binding GO:0048568 P embryonic organ development GO:0051536 F iron-sulfur cluster binding GO:0051539 F 4 iron, 4 sulfur cluster binding GO:0071897 P DNA biosynthetic process GO:0090305 P nucleic acid phosphodiester bond hydrolysis
351	O_BomoASG10316_5prime_partial:A_BomoASG_c26220_g1_i1 101bp	Bomo_Chr25
352	O_BomoASG10317_internal:A_BomoASG_c26221_g1_i1 112bp	Bomo_Chr15	probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X3_[Bombyx_mori]	GO:0004843 F thiol-dependent deubiquitinase GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0006511 P ubiquitin-dependent protein catabolic process GO:0007179 P transforming growth factor beta receptor signaling pathway GO:0007283 P spermatogenesis GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0016477 P cell migration GO:0016579 P protein deubiquitination GO:0016787 F hydrolase activity GO:0030509 P BMP signaling pathway GO:0036459 F thiol-dependent deubiquitinase GO:0070410 F co-SMAD binding
353	O_BomoASG10318_complete:A_BomoASG_c26226_g1_i1 104bp	Bomo_Chr13
354	O_BomoASG10319_internal:A_BomoASG_c26229_g1_i1 292bp	Bomo_Chr23	integrator_complex_subunit_7_[Bombyx_mori]	GO:0000077 P DNA damage checkpoint signaling GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005694 C chromosome GO:0006974 P cellular response to DNA damage stimulus GO:0016180 P snRNA processing GO:0032039 C integrator complex GO:0042795 P snRNA transcription by RNA polymerase II GO:0071479 P cellular response to ionizing radiation
355	O_BomoASG1031_3prime_partial:A_BomoASG_c6445_g1_i1 146bp	Bomo_Chr19	uncharacterized_protein_LOC101745177_[Bombyx_mori]	GO:0004601 F peroxidase activity GO:0005344 F oxygen carrier activity GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0006979 P response to oxidative stress GO:0015671 P oxygen transport GO:0016020 C membrane GO:0098869 P cellular oxidant detoxification
356	O_BomoASG10320_5prime_partial:A_BomoASG_c26229_g1_i1 102bp	Bomo_Chr23
357	O_BomoASG10321_5prime_partial:A_BomoASG_c26231_g1_i1 307bp	Bomo_Chr27	probable_cation-transporting_ATPase_13A3_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005524 F ATP binding GO:0005774 C vacuolar membrane GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0006457 P protein folding GO:0006812 P cation transport GO:0006874 P cellular calcium ion homeostasis GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016023 C cytoplasmic vesicle GO:0016787 F hydrolase activity GO:0016887 F ATP hydrolysis activity GO:0019829 F ATPase-coupled cation transmembrane transporter activity GO:0046872 F metal ion binding GO:0098655 P cation transmembrane transport
358	O_BomoASG10322_internal:A_BomoASG_c26234_g1_i1 517bp	Bomo_Chr12	multidrug_resistance-associated_protein_1_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005215 F transporter activity GO:0005524 F ATP binding GO:0005886 C plasma membrane GO:0006810 P transport GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0016887 F ATP hydrolysis activity GO:0042626 F ATPase-coupled transmembrane transporter activity GO:0055085 P transmembrane transport
359	O_BomoASG10323_complete:A_BomoASG_c26234_g1_i1 101bp	Bomo_Chr12
360	O_BomoASG10324_internal:A_BomoASG_c26237_g1_i1 235bp	Bomo_Chr12	xanthine_dehydrogenase,_partial_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0004854 F xanthine dehydrogenase activity GO:0004855 F xanthine oxidase activity GO:0005506 F iron ion binding GO:0005777 C peroxisome GO:0005829 C cytosol GO:0005875 C microtubule associated complex GO:0006144 P purine nucleobase metabolic process GO:0006206 P pyrimidine nucleobase metabolic process GO:0006525 P arginine metabolic process GO:0006568 P tryptophan metabolic process GO:0006650 P glycerophospholipid metabolic process GO:0008340 P determination of adult lifespan GO:0009055 F electron transfer activity GO:0009115 P xanthine catabolic process GO:0016491 F oxidoreductase activity GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors GO:0016903 F oxidoreductase activity, acting on the aldehyde or oxo group of donors GO:0043546 F molybdopterin cofactor binding GO:0045471 P response to ethanol GO:0046872 F metal ion binding GO:0048072 P compound eye pigmentation GO:0050660 F flavin adenine dinucleotide binding GO:0051536 F iron-sulfur cluster binding GO:0051537 F 2 iron, 2 sulfur cluster binding GO:0055114 P obsolete oxidation-reduction process