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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
301 O_BomoASG10271_complete:A_BomoASG_c26192_g1_i1
150bp
 transcription_cofactor_vestigial-like_protein_4_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
302 O_BomoASG10272_complete:A_BomoASG_c26192_g1_i1
135bp
303 O_BomoASG10273_3prime_partial:A_BomoASG_c26193_g1_i1
227bp
 tRNA:m(4)X_modification_enzyme_TRM13_homolog_isoform_X1_[Bombyx_mori]
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
304 O_BomoASG10274_3prime_partial:A_BomoASG_c26193_g1_i2
169bp
 tRNA:m(4)X_modification_enzyme_TRM13_homolog_isoform_X3_[Bombyx_mori]
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
305 O_BomoASG10275_internal:A_BomoASG_c26195_g1_i1
157bp
 zinc_finger_protein_62_homolog_isoform_X3_[Bombyx_mori]
306 O_BomoASG10276_5prime_partial:A_BomoASG_c26195_g1_i3
429bp
 uncharacterized_protein_LOC101741752_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
307 O_BomoASG10277_complete:A_BomoASG_c26195_g1_i3
123bp
308 O_BomoASG10278_complete:A_BomoASG_c26195_g1_i3
114bp
309 O_BomoASG10279_complete:A_BomoASG_c26196_g1_i1
203bp
 LOW_QUALITY_PROTEIN:_CDP-diacylglycerol--glycerol-3-phosphate_3-phosphatidyltransferase,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0006629 P lipid metabolic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0008444 F CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
GO:0008654 P phospholipid biosynthetic process
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
310 O_BomoASG1027_complete:A_BomoASG_c6437_g1_i1
115bp
 39S_ribosomal_protein_L42,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0005886 C plasma membrane
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070125 P mitochondrial translational elongation
GO:0070126 P mitochondrial translational termination
311 O_BomoASG10280_3prime_partial:A_BomoASG_c26197_g1_i1
218bp
 uncharacterized_protein_LOC101740309_isoform_X2_[Bombyx_mori]
312 O_BomoASG10281_complete:A_BomoASG_c26197_g1_i2
104bp
 uncharacterized_protein_LOC101740309_isoform_X2_[Bombyx_mori]
313 O_BomoASG10282_complete:A_BomoASG_c26198_g1_i1
375bp
 phosphoribosyl_pyrophosphate_synthase-associated_protein_2_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004749 F ribose phosphate diphosphokinase activity
GO:0009165 P nucleotide biosynthetic process
314 O_BomoASG10283_complete:A_BomoASG_c26198_g1_i2
369bp
 phosphoribosyl_pyrophosphate_synthase-associated_protein_2_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0002189 C ribose phosphate diphosphokinase complex
GO:0004749 F ribose phosphate diphosphokinase activity
GO:0009165 P nucleotide biosynthetic process
GO:0043234 C protein-containing complex
GO:0060348 P bone development
315 O_BomoASG10284_complete:A_BomoASG_c26198_g1_i3
356bp
 phosphoribosyl_pyrophosphate_synthase-associated_protein_2_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004749 F ribose phosphate diphosphokinase activity
GO:0009165 P nucleotide biosynthetic process
316 O_BomoASG10285_complete:A_BomoASG_c26201_g1_i1
993bp
 AP-3_complex_subunit_delta_[Bombyx_mori]
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005798 C Golgi-associated vesicle
GO:0005829 C cytosol
GO:0006726 P eye pigment biosynthetic process
GO:0006727 P ommochrome biosynthetic process
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006895 P Golgi to endosome transport
GO:0006897 P endocytosis
GO:0007040 P lysosome organization
GO:0007041 P lysosomal transport
GO:0007220 P Notch receptor processing
GO:0008055 P ocellus pigment biosynthetic process
GO:0008057 P eye pigment granule organization
GO:0008340 P determination of adult lifespan
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0046907 P intracellular transport
GO:0048072 P compound eye pigmentation
GO:0060967 P negative regulation of gene silencing by RNA
317 O_BomoASG10286_complete:A_BomoASG_c26201_g1_i1
182bp
318 O_BomoASG10287_complete:A_BomoASG_c26201_g1_i1
180bp
319 O_BomoASG10288_complete:A_BomoASG_c26201_g1_i1
110bp
320 O_BomoASG10289_5prime_partial:A_BomoASG_c26201_g1_i2
823bp
 AP-3_complex_subunit_delta_[Bombyx_mori]
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005798 C Golgi-associated vesicle
GO:0005829 C cytosol
GO:0006726 P eye pigment biosynthetic process
GO:0006727 P ommochrome biosynthetic process
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006895 P Golgi to endosome transport
GO:0006897 P endocytosis
GO:0007040 P lysosome organization
GO:0007041 P lysosomal transport
GO:0007220 P Notch receptor processing
GO:0008055 P ocellus pigment biosynthetic process
GO:0008057 P eye pigment granule organization
GO:0008340 P determination of adult lifespan
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0046907 P intracellular transport
GO:0048072 P compound eye pigmentation
GO:0060967 P negative regulation of gene silencing by RNA
321 O_BomoASG1028_complete:A_BomoASG_c6442_g1_i1
350bp
 poly(U)-specific_endoribonuclease_homolog_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
322 O_BomoASG10290_complete:A_BomoASG_c26201_g1_i2
182bp
323 O_BomoASG10291_complete:A_BomoASG_c26201_g1_i2
180bp
324 O_BomoASG10292_complete:A_BomoASG_c26203_g1_i1
104bp
325 O_BomoASG10293_complete:A_BomoASG_c26204_g1_i1
210bp
 ADP-ribosylation_factor-like_protein_4C_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0050873 P brown fat cell differentiation
326 O_BomoASG10294_5prime_partial:A_BomoASG_c26205_g1_i1
233bp
 myoneurin_isoform_X2_[Bombyx_mori]
327 O_BomoASG10295_3prime_partial:A_BomoASG_c26205_g1_i2
144bp
 myoneurin_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
328 O_BomoASG10296_5prime_partial:A_BomoASG_c26205_g1_i2
120bp
329 O_BomoASG10297_5prime_partial:A_BomoASG_c26205_g1_i3
248bp
 myoneurin_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
330 O_BomoASG10298_internal:A_BomoASG_c26205_g1_i4
391bp
 myoneurin_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
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