SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/32479
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2971 O_BomoASG12675_internal:A_BomoASG_c27775_g1_i1
114bp
 dystrobrevin_beta_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0045202 C synapse
GO:0046872 F metal ion binding
2972 O_BomoASG12676_5prime_partial:A_BomoASG_c27775_g2_i1
459bp
 dystrobrevin_beta_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0008270 F zinc ion binding
GO:0016014 C dystrobrevin complex
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043234 C protein-containing complex
GO:0045202 C synapse
GO:0046872 F metal ion binding
2973 O_BomoASG12677_5prime_partial:A_BomoASG_c27775_g2_i1
156bp
2974 O_BomoASG12678_5prime_partial:A_BomoASG_c27775_g2_i2
181bp
 dystrobrevin_beta_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006941 P striated muscle contraction
GO:0007165 P signal transduction
GO:0007268 P chemical synaptic transmission
GO:0007274 P neuromuscular synaptic transmission
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030165 F PDZ domain binding
GO:0030424 C axon
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0042383 C sarcolemma
GO:0042995 C cell projection
GO:0043234 C protein-containing complex
GO:0045202 C synapse
GO:0046872 F metal ion binding
2975 O_BomoASG12679_complete:A_BomoASG_c27777_g1_i1
373bp
 PREDICTED:_allantoicase-like_[Amyelois_transitella]
GO:0000256 P allantoin catabolic process
GO:0004037 F allantoicase activity
GO:0005575 C cellular_component
GO:0006144 P purine nucleobase metabolic process
GO:0016787 F hydrolase activity
2976 O_BomoASG1267_complete:A_BomoASG_c7610_g1_i1
129bp
2977 O_BomoASG12680_complete:A_BomoASG_c27777_g1_i1
108bp
2978 O_BomoASG12681_complete:A_BomoASG_c27777_g2_i1
369bp
 probable_allantoicase_isoform_X1_[Bombyx_mori]
GO:0000256 P allantoin catabolic process
GO:0004037 F allantoicase activity
GO:0016787 F hydrolase activity
2979 O_BomoASG12682_complete:A_BomoASG_c27777_g2_i1
100bp
2980 O_BomoASG12683_5prime_partial:A_BomoASG_c27777_g1_i2
275bp
 PREDICTED:_allantoicase-like_[Amyelois_transitella]
GO:0000256 P allantoin catabolic process
GO:0004037 F allantoicase activity
GO:0005575 C cellular_component
GO:0006144 P purine nucleobase metabolic process
GO:0016787 F hydrolase activity
2981 O_BomoASG12684_5prime_partial:A_BomoASG_c27777_g1_i3
125bp
 allantoicase-like_[Bombyx_mori]
GO:0000256 P allantoin catabolic process
GO:0004037 F allantoicase activity
GO:0005575 C cellular_component
GO:0006144 P purine nucleobase metabolic process
GO:0016787 F hydrolase activity
2982 O_BomoASG12685_complete:A_BomoASG_c27778_g1_i1
334bp
 mitochondrial_GTPase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
2983 O_BomoASG12686_complete:A_BomoASG_c27778_g1_i2
188bp
 mitochondrial_GTPase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
2984 O_BomoASG12687_internal:A_BomoASG_c27779_g1_i1
683bp
 uncharacterized_protein_LOC101742755_[Bombyx_mori]
GO:0001960 P negative regulation of cytokine-mediated signaling pathway
GO:0004601 F peroxidase activity
GO:0005152 F interleukin-1 receptor antagonist activity
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0006955 P immune response
GO:0006979 P response to oxidative stress
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0042744 P hydrogen peroxide catabolic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0098869 P cellular oxidant detoxification
2985 O_BomoASG12688_complete:A_BomoASG_c27779_g1_i1
127bp
2986 O_BomoASG12689_complete:A_BomoASG_c27781_g1_i1
625bp
 sodium-independent_sulfate_anion_transporter_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
2987 O_BomoASG1268_internal:A_BomoASG_c7611_g1_i1
121bp
 zinc_finger_protein_782-like_[Helicoverpa_armigera]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2988 O_BomoASG12690_complete:A_BomoASG_c27781_g1_i1
204bp
 hypothetical_protein_AX774_g3357_[Zancudomyces_culisetae]
2989 O_BomoASG12691_complete:A_BomoASG_c27781_g1_i1
130bp
2990 O_BomoASG12692_complete:A_BomoASG_c27781_g1_i1
115bp
2991 O_BomoASG12693_complete:A_BomoASG_c27781_g1_i2
227bp
2992 O_BomoASG12694_complete:A_BomoASG_c27781_g1_i2
126bp
 sodium-independent_sulfate_anion_transporter_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
2993 O_BomoASG12695_3prime_partial:A_BomoASG_c27782_g1_i1
303bp
 probable_malonyl-CoA-acyl_carrier_protein_transacylase,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
2994 O_BomoASG12696_5prime_partial:A_BomoASG_c27782_g1_i1
163bp
2995 O_BomoASG12697_complete:A_BomoASG_c27783_g1_i1
146bp
 biogenesis_of_lysosome-related_organelles_complex_1_subunit_2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0008150 P biological_process
GO:0031083 C BLOC-1 complex
GO:0042803 F protein homodimerization activity
2996 O_BomoASG12698_complete:A_BomoASG_c27783_g1_i3
141bp
 biogenesis_of_lysosome-related_organelles_complex_1_subunit_2_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0008150 P biological_process
GO:0031083 C BLOC-1 complex
GO:0042803 F protein homodimerization activity
2997 O_BomoASG12699_internal:A_BomoASG_c27785_g1_i1
264bp
 ATP-binding_cassette_sub-family_A_member_3_[Bombyx_mori]
2998 O_BomoASG1269_3prime_partial:A_BomoASG_c7615_g1_i1
492bp
 protein_dead_ringer_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000976 F transcription cis-regulatory region binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007517 P muscle organ development
GO:0008049 P male courtship behavior
GO:0009880 P embryonic pattern specification
GO:0009952 P anterior/posterior pattern specification
GO:0010906 P regulation of glucose metabolic process
GO:0042063 P gliogenesis
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045924 P regulation of female receptivity
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0070491 F DNA-binding transcription factor binding
2999 O_BomoASG126_complete:A_BomoASG_c838_g1_i1
432bp
 serine_protease_easter_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0006952 P defense response
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016787 F hydrolase activity
GO:0031638 P zymogen activation
3000 O_BomoASG12700_3prime_partial:A_BomoASG_c27785_g1_i1
141bp
previous next from show/32479

- SilkBase 1999-2023 -