SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/32479
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2701 O_BomoASG12431_complete:A_BomoASG_c27602_g1_i2
688bp
 uncharacterized_protein_LOC101737485_isoform_X1_[Bombyx_mori]
2702 O_BomoASG12432_5prime_partial:A_BomoASG_c27603_g1_i1
139bp
 transmembrane_protein_17-like_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030030 P cell projection organization
GO:0035869 C ciliary transition zone
GO:0036038 C MKS complex
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0060170 C ciliary membrane
2703 O_BomoASG12433_5prime_partial:A_BomoASG_c27603_g1_i3
139bp
 transmembrane_protein_17-like_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030030 P cell projection organization
GO:0035869 C ciliary transition zone
GO:0036038 C MKS complex
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0060170 C ciliary membrane
2704 O_BomoASG12434_complete:A_BomoASG_c27604_g1_i1
376bp
 probable_low-specificity_L-threonine_aldolase_2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004793 F threonine aldolase activity
GO:0005829 C cytosol
GO:0006520 P cellular amino acid metabolic process
GO:0006545 P glycine biosynthetic process
GO:0006567 P threonine catabolic process
GO:0008732 F L-allo-threonine aldolase activity
GO:0016829 F lyase activity
2705 O_BomoASG12435_complete:A_BomoASG_c27604_g1_i1
152bp
2706 O_BomoASG12436_complete:A_BomoASG_c27604_g1_i1
142bp
2707 O_BomoASG12437_5prime_partial:A_BomoASG_c27604_g1_i2
261bp
 probable_low-specificity_L-threonine_aldolase_2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004793 F threonine aldolase activity
GO:0005829 C cytosol
GO:0006520 P cellular amino acid metabolic process
GO:0006545 P glycine biosynthetic process
GO:0006567 P threonine catabolic process
GO:0008732 F L-allo-threonine aldolase activity
GO:0016829 F lyase activity
2708 O_BomoASG12438_complete:A_BomoASG_c27604_g1_i2
142bp
2709 O_BomoASG12439_3prime_partial:A_BomoASG_c27604_g1_i2
135bp
 hypothetical_protein_Cus16_3012_[Curtobacterium_sp._ER1/6]
2710 O_BomoASG1243_internal:A_BomoASG_c7452_g1_i1
173bp
 ankyrin_repeat_and_SOCS_box_protein_3_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0009507 C chloroplast
GO:0009536 C plastid
2711 O_BomoASG12440_complete:A_BomoASG_c27605_g1_i1
1204bp
 transcription_initiation_factor_TFIID_subunit_2_[Bombyx_mori]
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0022008 P neurogenesis
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0051123 P RNA polymerase II preinitiation complex assembly
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
2712 O_BomoASG12441_complete:A_BomoASG_c27605_g1_i1
121bp
2713 O_BomoASG12442_5prime_partial:A_BomoASG_c27606_g1_i1
284bp
 serine_proteinase_stubble_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0007010 P cytoskeleton organization
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016335 P morphogenesis of larval imaginal disc epithelium
GO:0016787 F hydrolase activity
GO:0035220 P wing disc development
GO:0051017 P actin filament bundle assembly
2714 O_BomoASG12443_complete:A_BomoASG_c27606_g1_i1
198bp
2715 O_BomoASG12444_internal:A_BomoASG_c27606_g2_i1
167bp
 clip_domain_serine_protease_11_precursor_[Bombyx_mori]
2716 O_BomoASG12445_5prime_partial:A_BomoASG_c27606_g2_i1
113bp
2717 O_BomoASG12446_3prime_partial:A_BomoASG_c27606_g2_i2
152bp
 clip_domain_serine_protease_11_precursor_[Bombyx_mori]
2718 O_BomoASG12447_5prime_partial:A_BomoASG_c27606_g2_i2
113bp
2719 O_BomoASG12448_complete:A_BomoASG_c27607_g1_i1
213bp
 DRK_protein_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0016020 C membrane
2720 O_BomoASG12449_5prime_partial:A_BomoASG_c27609_g1_i1
190bp
 alpha-N-acetylgalactosaminidase_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004557 F alpha-galactosidase activity
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0009505 C plant-type cell wall
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0052692 F raffinose alpha-galactosidase activity
2721 O_BomoASG1244_internal:A_BomoASG_c7453_g1_i1
300bp
 alpha-mannosidase_2_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001701 P in utero embryonic development
GO:0001889 P liver development
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559 F alpha-mannosidase activity
GO:0004572 F mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity
GO:0005615 C extracellular space
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0005975 P carbohydrate metabolic process
GO:0006013 P mannose metabolic process
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0006517 P protein deglycosylation
GO:0007005 P mitochondrion organization
GO:0007033 P vacuole organization
GO:0007585 P respiratory gaseous exchange by respiratory system
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0015923 F mannosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016799 F hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
GO:0048286 P lung alveolus development
GO:0050769 P positive regulation of neurogenesis
GO:0060042 P retina morphogenesis in camera-type eye
GO:0070062 C extracellular exosome
2722 O_BomoASG12450_5prime_partial:A_BomoASG_c27609_g1_i2
252bp
 alpha-N-acetylgalactosaminidase_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004557 F alpha-galactosidase activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0008456 F alpha-N-acetylgalactosaminidase activity
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
2723 O_BomoASG12451_complete:A_BomoASG_c27609_g1_i3
155bp
 alpha-N-acetylgalactosaminidase_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004557 F alpha-galactosidase activity
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0009505 C plant-type cell wall
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0052692 F raffinose alpha-galactosidase activity
2724 O_BomoASG12452_3prime_partial:A_BomoASG_c27609_g2_i1
166bp
 alpha-N-acetylgalactosaminidase_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004557 F alpha-galactosidase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0006687 P glycosphingolipid metabolic process
GO:0008152 P metabolic process
GO:0009311 P oligosaccharide metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016936 F galactoside binding
GO:0042803 F protein homodimerization activity
GO:0043202 C lysosomal lumen
GO:0045019 P negative regulation of nitric oxide biosynthetic process
GO:0046477 P glycosylceramide catabolic process
GO:0046479 P glycosphingolipid catabolic process
GO:0051001 P negative regulation of nitric-oxide synthase activity
GO:0052692 F raffinose alpha-galactosidase activity
GO:0070062 C extracellular exosome
2725 O_BomoASG12453_internal:A_BomoASG_c27610_g1_i1
407bp
 uncharacterized_protein_LOC110380377_isoform_X6_[Helicoverpa_armigera]
2726 O_BomoASG12454_3prime_partial:A_BomoASG_c27610_g1_i2
139bp
 PREDICTED:_uncharacterized_protein_LOC105393363_isoform_X1_[Plutella_xylostella]
2727 O_BomoASG12455_internal:A_BomoASG_c27610_g2_i1
187bp
 uncharacterized_protein_LOC105842437_[Bombyx_mori]
2728 O_BomoASG12456_complete:A_BomoASG_c27611_g1_i1
548bp
 uncharacterized_protein_LOC110374396_[Helicoverpa_armigera]
GO:0004806 F triglyceride lipase activity
GO:0005515 F protein binding
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0010891 P negative regulation of sequestering of triglyceride
GO:0010898 P positive regulation of triglyceride catabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0019433 P triglyceride catabolic process
2729 O_BomoASG12457_complete:A_BomoASG_c27611_g1_i1
146bp
2730 O_BomoASG12458_complete:A_BomoASG_c27611_g1_i1
100bp
previous next from show/32479

- SilkBase 1999-2023 -