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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2671 O_BomoASG12404_5prime_partial:A_BomoASG_c27584_g1_i2
291bp
 serine_protease_snake_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
2672 O_BomoASG12405_complete:A_BomoASG_c27585_g1_i1
622bp
 serine/arginine_repetitive_matrix_protein_5_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2673 O_BomoASG12406_complete:A_BomoASG_c27585_g1_i1
155bp
2674 O_BomoASG12407_complete:A_BomoASG_c27586_g1_i2
118bp
 uncharacterized_protein_LOC101741030_[Bombyx_mori]
2675 O_BomoASG12408_internal:A_BomoASG_c27587_g1_i1
574bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA1109_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019915 P lipid storage
GO:0045444 P fat cell differentiation
GO:0051647 P nucleus localization
GO:0060612 P adipose tissue development
2676 O_BomoASG12409_5prime_partial:A_BomoASG_c27587_g1_i1
288bp
2677 O_BomoASG1240_internal:A_BomoASG_c7447_g1_i1
99bp
2678 O_BomoASG12410_5prime_partial:A_BomoASG_c27587_g1_i1
263bp
2679 O_BomoASG12411_5prime_partial:A_BomoASG_c27587_g1_i1
208bp
2680 O_BomoASG12412_3prime_partial:A_BomoASG_c27587_g1_i1
195bp
2681 O_BomoASG12413_complete:A_BomoASG_c27589_g1_i1
100bp
2682 O_BomoASG12414_complete:A_BomoASG_c27589_g1_i2
100bp
2683 O_BomoASG12415_5prime_partial:A_BomoASG_c27590_g1_i1
260bp
 nodal_modulator_1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
GO:0031648 P protein destabilization
2684 O_BomoASG12416_3prime_partial:A_BomoASG_c27590_g1_i1
197bp
2685 O_BomoASG12417_5prime_partial:A_BomoASG_c27592_g1_i1
104bp
 PREDICTED:_uncharacterized_protein_LOC106141575,_partial_[Amyelois_transitella]
2686 O_BomoASG12418_internal:A_BomoASG_c27592_g1_i2
139bp
 PREDICTED:_uncharacterized_protein_LOC106141575,_partial_[Amyelois_transitella]
2687 O_BomoASG12419_5prime_partial:A_BomoASG_c27592_g1_i3
141bp
 PREDICTED:_uncharacterized_protein_LOC106141575,_partial_[Amyelois_transitella]
2688 O_BomoASG1241_internal:A_BomoASG_c7450_g1_i1
126bp
 homeobox_protein_araucan_isoform_X2_[Bombyx_mori]
GO:0001745 P compound eye morphogenesis
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007346 P regulation of mitotic cell cycle
GO:0007474 P imaginal disc-derived wing vein specification
GO:0042693 P muscle cell fate commitment
GO:0043565 F sequence-specific DNA binding
GO:0045317 P equator specification
GO:0045926 P negative regulation of growth
GO:0045944 P positive regulation of transcription by RNA polymerase II
2689 O_BomoASG12420_complete:A_BomoASG_c27595_g1_i2
158bp
 uncharacterized_protein_LOC101745673_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009055 F electron transfer activity
GO:0042446 P hormone biosynthetic process
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
2690 O_BomoASG12421_5prime_partial:A_BomoASG_c27596_g1_i1
107bp
2691 O_BomoASG12422_5prime_partial:A_BomoASG_c27598_g1_i1
348bp
 X-linked_retinitis_pigmentosa_GTPase_regulator_homolog_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0008150 P biological_process
2692 O_BomoASG12423_complete:A_BomoASG_c27598_g1_i2
117bp
 RCC1_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000209 P protein polyubiquitination
GO:0002376 P immune system process
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016874 F ligase activity
GO:0032020 P ISG15-protein conjugation
GO:0032480 P negative regulation of type I interferon production
GO:0042296 F ISG15 transferase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0048471 C perinuclear region of cytoplasm
GO:0050688 P regulation of defense response to virus
GO:0051607 P defense response to virus
2693 O_BomoASG12424_5prime_partial:A_BomoASG_c27598_g1_i3
198bp
 X-linked_retinitis_pigmentosa_GTPase_regulator_homolog_isoform_X1_[Bombyx_mori]
GO:0001669 C acrosomal vesicle
2694 O_BomoASG12425_complete:A_BomoASG_c27598_g1_i3
157bp
 RCC1_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000209 P protein polyubiquitination
GO:0002376 P immune system process
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016874 F ligase activity
GO:0032020 P ISG15-protein conjugation
GO:0032480 P negative regulation of type I interferon production
GO:0042296 F ISG15 transferase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0048471 C perinuclear region of cytoplasm
GO:0050688 P regulation of defense response to virus
GO:0051607 P defense response to virus
2695 O_BomoASG12426_3prime_partial:A_BomoASG_c27599_g1_i1
629bp
 mediator_of_RNA_polymerase_II_transcription_subunit_17_isoform_X1_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007275 P multicellular organism development
GO:0009987 P cellular process
GO:0016592 C mediator complex
GO:0019233 P sensory perception of pain
GO:0031618 C pericentric heterochromatin
GO:0033613 F DNA-binding transcription factor binding
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
2696 O_BomoASG12427_complete:A_BomoASG_c27599_g1_i1
138bp
2697 O_BomoASG12428_3prime_partial:A_BomoASG_c27599_g1_i2
500bp
 mediator_of_RNA_polymerase_II_transcription_subunit_17_isoform_X1_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007275 P multicellular organism development
GO:0009987 P cellular process
GO:0016592 C mediator complex
GO:0019233 P sensory perception of pain
GO:0031618 C pericentric heterochromatin
GO:0033613 F DNA-binding transcription factor binding
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
2698 O_BomoASG12429_complete:A_BomoASG_c27599_g1_i2
138bp
2699 O_BomoASG1242_5prime_partial:A_BomoASG_c7450_g1_i1
113bp
2700 O_BomoASG12430_5prime_partial:A_BomoASG_c27600_g1_i2
268bp
 LOW_QUALITY_PROTEIN:_protein_SHQ1_homolog,_partial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0022618 P ribonucleoprotein complex assembly
GO:0043065 P positive regulation of apoptotic process
GO:1904874 P positive regulation of telomerase RNA localization to Cajal body
GO:2000233 P negative regulation of rRNA processing
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