Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2191	O_BomoASG11973_complete:A_BomoASG_c27356_g1_i1 107bp	Bomo_Chr26
2192	O_BomoASG11974_3prime_partial:A_BomoASG_c27356_g1_i1 105bp	Bomo_Chr26
2193	O_BomoASG11975_3prime_partial:A_BomoASG_c27356_g1_i2 311bp	Bomo_Chr26	mitoferrin_[Bombyx_mori]	GO:0003735 F structural constituent of ribosome GO:0005381 F iron ion transmembrane transporter activity GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006412 P translation GO:0006810 P transport GO:0006811 P ion transport GO:0006839 P mitochondrial transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0031966 C mitochondrial membrane GO:0034755 P iron ion transmembrane transport GO:0048250 P iron import into the mitochondrion GO:0048515 P spermatid differentiation GO:0055072 P iron ion homeostasis GO:0055085 P transmembrane transport GO:0060586 P multicellular organismal iron ion homeostasis
2194	O_BomoASG11976_complete:A_BomoASG_c27356_g1_i2 107bp	Bomo_Chr26
2195	O_BomoASG11977_complete:A_BomoASG_c27356_g1_i2 104bp	Bomo_Chr26
2196	O_BomoASG11978_internal:A_BomoASG_c27358_g1_i1 160bp	Bomo_Chr22	inducible_metalloproteinase_inhibitor_protein-like_isoform_X1_[Bombyx_mori]	GO:0004857 F enzyme inhibitor activity GO:0005615 C extracellular space GO:0008191 F metalloendopeptidase inhibitor activity GO:0009653 P anatomical structure morphogenesis GO:0010466 P negative regulation of peptidase activity GO:0010951 P negative regulation of endopeptidase activity GO:0030198 P extracellular matrix organization GO:0030414 F peptidase inhibitor activity GO:0042060 P wound healing
2197	O_BomoASG11979_5prime_partial:A_BomoASG_c27358_g1_i2 172bp	Bomo_Chr22
2198	O_BomoASG1197_3prime_partial:A_BomoASG_c7143_g1_i1 132bp	Bomo_Chr1	eukaryotic_translation_initiation_factor_4_gamma_3_[Bombyx_mori]
2199	O_BomoASG11980_5prime_partial:A_BomoASG_c27358_g1_i2 167bp	Bomo_Chr22	inducible_metalloproteinase_inhibitor_protein-like_isoform_X1_[Bombyx_mori]	GO:0004857 F enzyme inhibitor activity GO:0005615 C extracellular space GO:0008191 F metalloendopeptidase inhibitor activity GO:0009653 P anatomical structure morphogenesis GO:0010466 P negative regulation of peptidase activity GO:0010951 P negative regulation of endopeptidase activity GO:0030198 P extracellular matrix organization GO:0030414 F peptidase inhibitor activity GO:0042060 P wound healing
2200	O_BomoASG11981_complete:A_BomoASG_c27359_g1_i1 596bp	Bomo_Chr16	MOG_interacting_and_ectopic_P-granules_protein_1_[Bombyx_mori]	GO:0002119 P nematode larval development GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0007275 P multicellular organism development GO:0007506 P gonadal mesoderm development GO:0007548 P sex differentiation GO:0008134 F transcription factor binding GO:0008406 P gonad development GO:0010468 P regulation of gene expression GO:0017151 F DEAD/H-box RNA helicase binding GO:0030154 P cell differentiation GO:0040025 P vulval development GO:0040035 P hermaphrodite genitalia development GO:0042802 F identical protein binding GO:0042826 F histone deacetylase binding GO:0046872 F metal ion binding GO:0048599 P oocyte development
2201	O_BomoASG11982_complete:A_BomoASG_c27359_g1_i2 880bp	Bomo_Chr16	MOG_interacting_and_ectopic_P-granules_protein_1_[Bombyx_mori]	GO:0002119 P nematode larval development GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0007275 P multicellular organism development GO:0007506 P gonadal mesoderm development GO:0007548 P sex differentiation GO:0008134 F transcription factor binding GO:0008406 P gonad development GO:0010468 P regulation of gene expression GO:0017151 F DEAD/H-box RNA helicase binding GO:0030154 P cell differentiation GO:0040025 P vulval development GO:0040035 P hermaphrodite genitalia development GO:0042802 F identical protein binding GO:0042826 F histone deacetylase binding GO:0046872 F metal ion binding GO:0048599 P oocyte development
2202	O_BomoASG11983_complete:A_BomoASG_c27360_g1_i1 149bp	Bomo_Chr16	mediator_of_RNA_polymerase_II_transcription_subunit_21_[Bombyx_mori]	GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated
2203	O_BomoASG11984_internal:A_BomoASG_c27363_g1_i1 234bp	Bomo_Chr18	endonuclease-reverse_transcriptase_[Bombyx_mori]	GO:0003964 F RNA-directed DNA polymerase activity GO:0004190 F aspartic-type endopeptidase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0046872 F metal ion binding GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2204	O_BomoASG11985_internal:A_BomoASG_c27363_g1_i2 305bp	Bomo_Chr25	endonuclease-reverse_transcriptase_[Bombyx_mori]	GO:0003964 F RNA-directed DNA polymerase activity GO:0004190 F aspartic-type endopeptidase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0046872 F metal ion binding GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2205	O_BomoASG11986_5prime_partial:A_BomoASG_c27365_g1_i1 426bp	Bomo_Chr15	PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Papilio_xuthus]	GO:0004842 F ubiquitin-protein transferase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005575 C cellular_component GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005814 C centriole GO:0005856 C cytoskeleton GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0042787 P ubiquitin-dependent protein catabolic process GO:0043547 P positive regulation of GTPase activity GO:0046872 F metal ion binding
2206	O_BomoASG11987_internal:A_BomoASG_c27366_g1_i1 385bp	Bomo_Chr1	polyhomeotic_isoform_X4_[Bombyx_mori]	GO:0000070 P mitotic sister chromatid segregation GO:0001047 F core promoter sequence-specific DNA binding GO:0003677 F DNA binding GO:0003682 F chromatin binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006342 P heterochromatin assembly GO:0007275 P multicellular organism development GO:0008270 F zinc ion binding GO:0016458 P obsolete gene silencing GO:0021954 P central nervous system neuron development GO:0030708 P germarium-derived female germ-line cyst encapsulation GO:0030713 P ovarian follicle cell stalk formation GO:0035075 P response to ecdysone GO:0035102 C PRC1 complex GO:0035186 P syncytial blastoderm mitotic cell cycle GO:0044547 F DNA topoisomerase binding GO:0045892 P negative regulation of transcription, DNA-templated GO:0046872 F metal ion binding GO:0051087 F chaperone binding
2207	O_BomoASG11988_5prime_partial:A_BomoASG_c27366_g1_i1 188bp	Bomo_Chr1
2208	O_BomoASG11989_complete:A_BomoASG_c27366_g1_i1 126bp	Bomo_Chr1
2209	O_BomoASG1198_internal:A_BomoASG_c7148_g1_i1 132bp	Bomo_Chr15	retroelement_polyprotein_[Danaus_plexippus_plexippus]
2210	O_BomoASG11990_5prime_partial:A_BomoASG_c27366_g1_i1 100bp	Bomo_Chr1
2211	O_BomoASG11991_internal:A_BomoASG_c27366_g1_i2 338bp	Bomo_Chr1	polyhomeotic_isoform_X8_[Bombyx_mori]
2212	O_BomoASG11992_5prime_partial:A_BomoASG_c27366_g1_i2 141bp	Bomo_Chr1
2213	O_BomoASG11993_complete:A_BomoASG_c27366_g1_i2 126bp	Bomo_Chr1
2214	O_BomoASG11994_5prime_partial:A_BomoASG_c27366_g1_i2 100bp	Bomo_Chr1
2215	O_BomoASG11995_internal:A_BomoASG_c27366_g2_i1 500bp	Bomo_Chr1	polyhomeotic_isoform_X3_[Bombyx_mori]	GO:0000070 P mitotic sister chromatid segregation GO:0001047 F core promoter sequence-specific DNA binding GO:0003677 F DNA binding GO:0003682 F chromatin binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006342 P heterochromatin assembly GO:0007275 P multicellular organism development GO:0008270 F zinc ion binding GO:0016458 P obsolete gene silencing GO:0021954 P central nervous system neuron development GO:0030708 P germarium-derived female germ-line cyst encapsulation GO:0030713 P ovarian follicle cell stalk formation GO:0035075 P response to ecdysone GO:0035102 C PRC1 complex GO:0035186 P syncytial blastoderm mitotic cell cycle GO:0044547 F DNA topoisomerase binding GO:0045892 P negative regulation of transcription, DNA-templated GO:0046872 F metal ion binding GO:0051087 F chaperone binding
2216	O_BomoASG11996_complete:A_BomoASG_c27366_g2_i1 164bp	Bomo_Chr1
2217	O_BomoASG11997_5prime_partial:A_BomoASG_c27368_g1_i1 178bp	Bomo_Chr20	nucleolar_protein_9_[Bombyx_mori]	GO:0003723 F RNA binding GO:0005575 C cellular_component GO:0008150 P biological_process GO:0044822 F RNA binding
2218	O_BomoASG11998_internal:A_BomoASG_c27368_g2_i1 351bp	Bomo_Chr20	nucleolar_protein_9_[Bombyx_mori]	GO:0003723 F RNA binding GO:0005575 C cellular_component GO:0008150 P biological_process GO:0044822 F RNA binding
2219	O_BomoASG11999_5prime_partial:A_BomoASG_c27368_g2_i1 199bp	Bomo_Chr20
2220	O_BomoASG1199_5prime_partial:A_BomoASG_c7148_g1_i1 121bp	Bomo_Chr15