Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
1411	O_BomoASG11270_5prime_partial:A_BomoASG_c26899_g1_i3 130bp	Bomo_Chr28
1412	O_BomoASG11271_5prime_partial:A_BomoASG_c26899_g1_i3 120bp	Bomo_Chr28
1413	O_BomoASG11272_5prime_partial:A_BomoASG_c26902_g1_i1 820bp	Bomo_Chr4	LOW_QUALITY_PROTEIN:_DNA-directed_RNA_polymerase_II_subunit_RPB2_[Bombyx_mori]	GO:0001055 F RNA polymerase II activity GO:0003677 F DNA binding GO:0003899 F DNA-directed 5'-3' RNA polymerase activity GO:0005634 C nucleus GO:0005665 C RNA polymerase II, core complex GO:0006351 P transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0032549 F ribonucleoside binding GO:0046872 F metal ion binding
1414	O_BomoASG11273_complete:A_BomoASG_c26902_g1_i2 1176bp	Bomo_Chr4	LOW_QUALITY_PROTEIN:_DNA-directed_RNA_polymerase_II_subunit_RPB2_[Bombyx_mori]	GO:0001055 F RNA polymerase II activity GO:0003677 F DNA binding GO:0003899 F DNA-directed 5'-3' RNA polymerase activity GO:0005634 C nucleus GO:0005665 C RNA polymerase II, core complex GO:0006351 P transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0032549 F ribonucleoside binding GO:0046872 F metal ion binding
1415	O_BomoASG11274_internal:A_BomoASG_c26904_g1_i1 265bp	Bomo_Chr25	endonuclease-reverse_transcriptase_[Bombyx_mori]	GO:0005634 C nucleus GO:0005737 C cytoplasm
1416	O_BomoASG11275_5prime_partial:A_BomoASG_c26905_g1_i1 125bp	Bomo_Chr17	WASH_complex_subunit_1_[Bombyx_mori]	GO:0001578 P microtubule bundle formation GO:0003779 F actin binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0005768 C endosome GO:0005769 C early endosome GO:0005829 C cytosol GO:0006810 P transport GO:0015031 P protein transport GO:0030154 P cell differentiation GO:0031941 C filamentous actin GO:0034314 P Arp2/3 complex-mediated actin nucleation GO:0035210 P prepupal development GO:0035277 P spiracle morphogenesis, open tracheal system GO:0042147 P retrograde transport, endosome to Golgi GO:0043014 F alpha-tubulin binding GO:0048471 C perinuclear region of cytoplasm GO:0048477 P oogenesis GO:0051017 P actin filament bundle assembly GO:0051020 F GTPase binding GO:0051764 P actin crosslink formation GO:0071203 C WASH complex
1417	O_BomoASG11276_3prime_partial:A_BomoASG_c26907_g1_i2 135bp	Bomo_Chr18	thioredoxin,_mitochondrial_isoform_X1_[Bombyx_mori]	GO:0000103 P sulfate assimilation GO:0001666 P response to hypoxia GO:0005515 F protein binding GO:0005730 C nucleolus GO:0005739 C mitochondrion GO:0006457 P protein folding GO:0006662 P glycerol ether metabolic process GO:0006979 P response to oxidative stress GO:0007584 P response to nutrient GO:0008113 F peptide-methionine (S)-S-oxide reductase activity GO:0009725 P response to hormone GO:0009749 P response to glucose GO:0014070 P response to organic cyclic compound GO:0015035 F protein-disulfide reductase activity GO:0030425 C dendrite GO:0031669 P cellular response to nutrient levels GO:0032403 F protein-containing complex binding GO:0033743 F peptide-methionine (R)-S-oxide reductase activity GO:0034599 P cellular response to oxidative stress GO:0042493 P response to xenobiotic stimulus GO:0043025 C neuronal cell body GO:0045454 P cell redox homeostasis GO:0048678 P response to axon injury GO:0055114 P obsolete oxidation-reduction process
1418	O_BomoASG11277_5prime_partial:A_BomoASG_c26909_g1_i1 111bp	Bomo_Chr23	tyrosine-protein_phosphatase_non-receptor_type_21_[Bombyx_mori]	GO:0004721 F phosphoprotein phosphatase activity GO:0004725 F protein tyrosine phosphatase activity GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0006470 P protein dephosphorylation GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0016791 F phosphatase activity GO:0035335 P peptidyl-tyrosine dephosphorylation
1419	O_BomoASG11278_5prime_partial:A_BomoASG_c26909_g1_i1 108bp	Bomo_Chr23
1420	O_BomoASG11279_3prime_partial:A_BomoASG_c26910_g1_i1 161bp	Bomo_Chr4	exonuclease_mut-7_homolog_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0004518 F nuclease activity GO:0004527 F exonuclease activity GO:0006139 P nucleobase-containing compound metabolic process GO:0008408 F 3'-5' exonuclease activity GO:0016787 F hydrolase activity GO:0046872 F metal ion binding GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1421	O_BomoASG1127_complete:A_BomoASG_c6667_g1_i1 154bp	Bomo_Chr10	NADP-dependent_isocitrate_dehydrogenase_[Brucella_pinnipedialis_M292/94/1]
1422	O_BomoASG11280_5prime_partial:A_BomoASG_c26912_g2_i1 113bp	Bomo_Chr24	PREDICTED:_uncharacterized_protein_LOC106131092_[Amyelois_transitella]
1423	O_BomoASG11281_complete:A_BomoASG_c26916_g1_i1 234bp	Bomo_Chr3	uncharacterized_protein_LOC101737675_[Bombyx_mori]
1424	O_BomoASG11282_5prime_partial:A_BomoASG_c26916_g1_i2 196bp	Bomo_Chr3	uncharacterized_protein_LOC101737675_[Bombyx_mori]
1425	O_BomoASG11283_complete:A_BomoASG_c26918_g1_i1 187bp	Bomo_Chr20	microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5_[Bombyx_mori]
1426	O_BomoASG11284_complete:A_BomoASG_c26920_g1_i1 317bp	Bomo_Chr8	SPRY_domain-containing_SOCS_box_protein_3-like_[Bombyx_mori]	GO:0005622 C intracellular anatomical structure GO:0016567 P protein ubiquitination GO:0035556 P intracellular signal transduction
1427	O_BomoASG11285_complete:A_BomoASG_c26920_g1_i2 317bp	Bomo_Chr8	SPRY_domain-containing_SOCS_box_protein_3-like_[Bombyx_mori]	GO:0005622 C intracellular anatomical structure GO:0016567 P protein ubiquitination GO:0035556 P intracellular signal transduction
1428	O_BomoASG11286_3prime_partial:A_BomoASG_c26922_g1_i1 364bp	Bomo_Chr10	PREDICTED:_serine/threonine-protein_kinase_NLK_isoform_X2_[Amyelois_transitella]	GO:0000165 P MAPK cascade GO:0000166 F nucleotide binding GO:0000287 F magnesium ion binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0004707 F MAP kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006468 P protein phosphorylation GO:0007179 P transforming growth factor beta receptor signaling pathway GO:0008134 F transcription factor binding GO:0016055 P Wnt signaling pathway GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0018107 P peptidyl-threonine phosphorylation GO:0030178 P negative regulation of Wnt signaling pathway GO:0031625 F ubiquitin protein ligase binding GO:0033136 P serine phosphorylation of STAT protein GO:0035556 P intracellular signal transduction GO:0042169 F SH2 domain binding GO:0046777 P protein autophosphorylation GO:0046872 F metal ion binding GO:0050821 P protein stabilization
1429	O_BomoASG11287_5prime_partial:A_BomoASG_c26922_g1_i1 174bp	Bomo_Chr10
1430	O_BomoASG11288_3prime_partial:A_BomoASG_c26923_g1_i1 200bp	Bomo_Chr11	uncharacterized_protein_LOC101741301_[Bombyx_mori]	GO:0070301 P cellular response to hydrogen peroxide
1431	O_BomoASG11289_internal:A_BomoASG_c26923_g1_i2 187bp	Bomo_Chr11	uncharacterized_protein_LOC101741301_[Bombyx_mori]	GO:0070301 P cellular response to hydrogen peroxide
1432	O_BomoASG1128_internal:A_BomoASG_c6675_g1_i1 109bp	Bomo_Chr15	LOW_QUALITY_PROTEIN:_probable_E3_ubiquitin-protein_ligase_HERC2_[Helicoverpa_armigera]	GO:0004842 F ubiquitin-protein transferase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005743 C mitochondrial inner membrane GO:0005814 C centriole GO:0005856 C cytoskeleton GO:0006281 P DNA repair GO:0006303 P double-strand break repair via nonhomologous end joining GO:0006886 P intracellular protein transport GO:0006974 P cellular response to DNA damage stimulus GO:0007283 P spermatogenesis GO:0008270 F zinc ion binding GO:0016020 C membrane GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0016925 P protein sumoylation GO:0031625 F ubiquitin protein ligase binding GO:0032183 F SUMO binding GO:0042787 P ubiquitin-dependent protein catabolic process GO:0043547 P positive regulation of GTPase activity GO:0046872 F metal ion binding
1433	O_BomoASG11290_complete:A_BomoASG_c26924_g1_i1 139bp	Bomo_Chr27	PREDICTED:_protein_lethal(2)essential_for_life-like_isoform_X2_[Amyelois_transitella]	GO:0005212 F structural constituent of eye lens GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0042803 F protein homodimerization activity GO:0046872 F metal ion binding
1434	O_BomoASG11291_3prime_partial:A_BomoASG_c26926_g1_i1 351bp	Bomo_Chr21	NAD-dependent_protein_deacetylase_Sirt6_[Bombyx_mori]	GO:0004407 F histone deacetylase activity GO:0005634 C nucleus GO:0008340 P determination of adult lifespan GO:0016575 P histone deacetylation GO:0016787 F hydrolase activity GO:0031937 P obsolete positive regulation of chromatin silencing GO:0046872 F metal ion binding GO:0070403 F NAD+ binding
1435	O_BomoASG11292_3prime_partial:A_BomoASG_c26928_g2_i1 142bp	Bomo_Chr25	Fau_protein,_partial_[Operophtera_brumata]
1436	O_BomoASG11293_internal:A_BomoASG_c26928_g1_i2 244bp	Bomo_Chr25	PREDICTED:_protein_anoxia_up-regulated-like_[Amyelois_transitella]	GO:0005575 C cellular_component GO:0034059 P response to anoxia
1437	O_BomoASG11294_internal:A_BomoASG_c26928_g3_i1 177bp	Bomo_Chr25	uncharacterized_protein_CG45076-like_isoform_X2_[Helicoverpa_armigera]	GO:0005575 C cellular_component GO:0034059 P response to anoxia
1438	O_BomoASG11295_internal:A_BomoASG_c26928_g3_i1 177bp	Bomo_Chr25
1439	O_BomoASG11296_complete:A_BomoASG_c26929_g1_i1 391bp	Bomo_Chr17	ribosomal_L1_domain-containing_protein_CG13096_[Bombyx_mori]	GO:0003674 F molecular_function GO:0003723 F RNA binding GO:0005575 C cellular_component GO:0008150 P biological_process GO:0019233 P sensory perception of pain
1440	O_BomoASG11297_internal:A_BomoASG_c26930_g2_i1 100bp	Bomo_Chr26