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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1381 O_BomoASG11243_3prime_partial:A_BomoASG_c26881_g1_i3
371bp
 ribosome-releasing_factor_2,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0032543 P mitochondrial translation
GO:0032790 P ribosome disassembly
1382 O_BomoASG11244_3prime_partial:A_BomoASG_c26884_g1_i1
759bp
 serine/threonine-protein_kinase_tousled-like_2_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
1383 O_BomoASG11245_3prime_partial:A_BomoASG_c26884_g1_i2
704bp
 serine/threonine-protein_kinase_tousled-like_2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
1384 O_BomoASG11246_internal:A_BomoASG_c26884_g1_i3
546bp
 serine/threonine-protein_kinase_tousled-like_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005882 C intermediate filament
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0010507 P negative regulation of autophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0030054 C cell junction
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0035556 P intracellular signal transduction
GO:0048471 C perinuclear region of cytoplasm
GO:0071480 P cellular response to gamma radiation
1385 O_BomoASG11247_3prime_partial:A_BomoASG_c26884_g1_i5
757bp
 serine/threonine-protein_kinase_tousled-like_2_isoform_X6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
1386 O_BomoASG11248_3prime_partial:A_BomoASG_c26884_g1_i6
741bp
 serine/threonine-protein_kinase_tousled-like_2_isoform_X9_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
1387 O_BomoASG11249_3prime_partial:A_BomoASG_c26884_g1_i7
746bp
 serine/threonine-protein_kinase_tousled-like_2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
1388 O_BomoASG1124_internal:A_BomoASG_c6653_g1_i1
122bp
 uncharacterized_protein_LOC105842880_[Bombyx_mori]
1389 O_BomoASG11250_3prime_partial:A_BomoASG_c26884_g1_i8
775bp
 serine/threonine-protein_kinase_tousled-like_2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
1390 O_BomoASG11251_complete:A_BomoASG_c26884_g1_i8
116bp
1391 O_BomoASG11252_internal:A_BomoASG_c26886_g1_i1
370bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1392 O_BomoASG11253_5prime_partial:A_BomoASG_c26886_g1_i1
273bp
 vegetative_cell_wall_protein_gp1_[Bombyx_mori]
1393 O_BomoASG11254_3prime_partial:A_BomoASG_c26886_g1_i1
205bp
 uncharacterized_protein_LOC109862627,_partial_[Pseudomyrmex_gracilis]
1394 O_BomoASG11255_3prime_partial:A_BomoASG_c26889_g1_i1
379bp
 translation_initiation_factor_IF-2,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0032790 P ribosome disassembly
GO:0043024 F ribosomal small subunit binding
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
1395 O_BomoASG11256_5prime_partial:A_BomoASG_c26889_g1_i1
193bp
 unknown_[Myxococcus_xanthus_DK_1622]
1396 O_BomoASG11257_5prime_partial:A_BomoASG_c26889_g1_i1
176bp
 Uncharacterised_protein_[Vibrio_cholerae]
1397 O_BomoASG11258_5prime_partial:A_BomoASG_c26891_g2_i1
442bp
 dynactin_subunit_1_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005818 C aster
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007349 P cellularization
GO:0008090 P retrograde axonal transport
GO:0010970 P transport along microtubule
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030286 C dynein complex
GO:0030496 C midbody
GO:0031616 C spindle pole centrosome
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0035371 C microtubule plus-end
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045502 F dynein complex binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0048491 P retrograde synaptic vesicle transport
GO:0048675 P axon extension
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051256 P mitotic spindle midzone assembly
GO:0051299 P centrosome separation
GO:0051383 P kinetochore organization
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
GO:1904115 C axon cytoplasm
1398 O_BomoASG11259_complete:A_BomoASG_c26891_g2_i1
136bp
1399 O_BomoASG1125_3prime_partial:A_BomoASG_c6662_g1_i1
158bp
 piezo-type_mechanosensitive_ion_channel_component,_partial_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007638 P mechanosensory behavior
GO:0008381 F mechanosensitive ion channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0050896 P response to stimulus
GO:0071260 P cellular response to mechanical stimulus
1400 O_BomoASG11260_complete:A_BomoASG_c26891_g2_i1
100bp
1401 O_BomoASG11261_5prime_partial:A_BomoASG_c26891_g2_i2
274bp
 dynactin_subunit_1_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005818 C aster
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007349 P cellularization
GO:0008090 P retrograde axonal transport
GO:0010970 P transport along microtubule
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030286 C dynein complex
GO:0030496 C midbody
GO:0031616 C spindle pole centrosome
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0035371 C microtubule plus-end
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045502 F dynein complex binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0048491 P retrograde synaptic vesicle transport
GO:0048675 P axon extension
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051256 P mitotic spindle midzone assembly
GO:0051299 P centrosome separation
GO:0051383 P kinetochore organization
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
GO:1904115 C axon cytoplasm
1402 O_BomoASG11262_complete:A_BomoASG_c26891_g2_i2
100bp
1403 O_BomoASG11263_3prime_partial:A_BomoASG_c26892_g1_i1
113bp
 PREDICTED:_DPH4_homolog_[Amyelois_transitella]
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006457 P protein folding
GO:0008270 F zinc ion binding
GO:0009408 P response to heat
GO:0031072 F heat shock protein binding
GO:0046872 F metal ion binding
GO:0051082 F unfolded protein binding
1404 O_BomoASG11264_3prime_partial:A_BomoASG_c26898_g1_i1
302bp
 LOW_QUALITY_PROTEIN:_protein_asteroid_[Bombyx_mori]
GO:0001745 P compound eye morphogenesis
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007526 P larval somatic muscle development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
1405 O_BomoASG11265_complete:A_BomoASG_c26899_g1_i1
182bp
 rho_guanine_nucleotide_exchange_factor_18_[Bombyx_mori]
1406 O_BomoASG11266_3prime_partial:A_BomoASG_c26899_g1_i2
231bp
 rho_guanine_nucleotide_exchange_factor_18_[Bombyx_mori]
1407 O_BomoASG11267_5prime_partial:A_BomoASG_c26899_g1_i2
130bp
1408 O_BomoASG11268_5prime_partial:A_BomoASG_c26899_g1_i2
120bp
1409 O_BomoASG11269_3prime_partial:A_BomoASG_c26899_g1_i3
231bp
 rho_guanine_nucleotide_exchange_factor_18_[Bombyx_mori]
1410 O_BomoASG1126_complete:A_BomoASG_c6667_g1_i1
409bp
 isocitrate_dehydrogenase_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004450 F isocitrate dehydrogenase (NADP+) activity
GO:0005737 C cytoplasm
GO:0006097 P glyoxylate cycle
GO:0006099 P tricarboxylic acid cycle
GO:0006102 P isocitrate metabolic process
GO:0006103 P 2-oxoglutarate metabolic process
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
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